RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 DUSP18Q8NEJ0 188 aa13.67□□□□□ -0.22
SMARCAL1-205ENST00000425815 MUC7Q8TAX7 377 aa13.67□□□□□ -0.22
SMARCAL1-205ENST00000425815 TMEM170AQ8WVE7 144 aa13.67□□□□□ -0.22
SMARCAL1-205ENST00000425815 RNF2Q99496 336 aa13.67□□□□□ -0.22
SMARCAL1-205ENST00000425815 IGHV7-4-1A0A0J9YVY3 117 aa13.66□□□□□ -0.22
SMARCAL1-205ENST00000425815 YIF1AO95070 293 aa13.66□□□□□ -0.22
SMARCAL1-205ENST00000425815 S100A5P33763 92 aa13.66□□□□□ -0.22
SMARCAL1-205ENST00000425815 NPBWR1P48145 328 aa13.66□□□□□ -0.22
SMARCAL1-205ENST00000425815 ANKRD55Q3KP44 614 aa13.66□□□□□ -0.22
SMARCAL1-205ENST00000425815 LYZL2Q7Z4W2 148 aa13.66□□□□□ -0.22
SMARCAL1-205ENST00000425815 SPAG8Q99932 426 aaPredicted RBP13.66□□□□□ -0.22
SMARCAL1-205ENST00000425815 RHPN1-AS1Q9BWJ2 59 aa13.66□□□□□ -0.22
SMARCAL1-205ENST00000425815 ENY2Q9NPA8 101 aa13.66□□□□□ -0.22
SMARCAL1-205ENST00000425815 IGHV3-49A0A0A0MS15 119 aa13.65□□□□□ -0.22
SMARCAL1-205ENST00000425815 NMSQ5H8A3 153 aa13.65□□□□□ -0.22
SMARCAL1-205ENST00000425815 FAM90A2PQ658T7 463 aa13.65□□□□□ -0.22
SMARCAL1-205ENST00000425815 LILRB2Q8N423 598 aa13.65□□□□□ -0.22
SMARCAL1-205ENST00000425815 TMEM116Q8NCL8 245 aa13.65□□□□□ -0.22
SMARCAL1-205ENST00000425815 SRRQ9GZT4 340 aa13.65□□□□□ -0.22
SMARCAL1-205ENST00000425815 STARD9Q9P2P6 4700 aa13.64□□□□□ -0.23
SMARCAL1-205ENST00000425815 TRAV14DV4A0A0A6YYC5 116 aa13.64□□□□□ -0.23
SMARCAL1-205ENST00000425815 A0A0B4J2A0 478 aa13.64□□□□□ -0.23
SMARCAL1-205ENST00000425815 A0A1B0GU03 582 aa13.64□□□□□ -0.23
SMARCAL1-205ENST00000425815 CORTO00230 105 aa13.64□□□□□ -0.23
SMARCAL1-205ENST00000425815 CLN5O75503 358 aa13.64□□□□□ -0.23
SMARCAL1-205ENST00000425815 NXPH3O95157 252 aa13.64□□□□□ -0.23
SMARCAL1-205ENST00000425815 APOHP02749 345 aaPredicted RBP13.64□□□□□ -0.23
SMARCAL1-205ENST00000425815 C2orf83Q53S99 150 aa13.64□□□□□ -0.23
SMARCAL1-205ENST00000425815 CASC10Q5T4H9 136 aa13.64□□□□□ -0.23
SMARCAL1-205ENST00000425815 LAMTOR1Q6IAA8 161 aa13.64□□□□□ -0.23
SMARCAL1-205ENST00000425815 OR4X1Q8NH49 305 aa13.64□□□□□ -0.23
SMARCAL1-205ENST00000425815 ZFAND3Q9H8U3 227 aa13.64□□□□□ -0.23
SMARCAL1-205ENST00000425815 UBQLN2Q9UHD9 624 aa13.64□□□□□ -0.23
SMARCAL1-205ENST00000425815 SHPKQ9UHJ6 478 aa13.64□□□□□ -0.23
SMARCAL1-205ENST00000425815 IGHV3OR16-13A0A075B7E8 117 aa13.63□□□□□ -0.23
SMARCAL1-205ENST00000425815 IGHV3-74A0A0B4J1X5 117 aa13.63□□□□□ -0.23
SMARCAL1-205ENST00000425815 SULT1A3P0DMM9 295 aa13.63□□□□□ -0.23
SMARCAL1-205ENST00000425815 SULT1A4P0DMN0 295 aa13.63□□□□□ -0.23
SMARCAL1-205ENST00000425815 FAUP35544 74 aaKnown RBP13.63□□□□□ -0.23
SMARCAL1-205ENST00000425815 OPRK1P41145 380 aa13.63□□□□□ -0.23
SMARCAL1-205ENST00000425815 HTR2BP41595 481 aa13.63□□□□□ -0.23
SMARCAL1-205ENST00000425815 AP3S2P59780 193 aa13.63□□□□□ -0.23
SMARCAL1-205ENST00000425815 ODF3L2Q3SX64 289 aa13.63□□□□□ -0.23
SMARCAL1-205ENST00000425815 ZNF600Q6ZNG1 722 aa13.63□□□□□ -0.23
SMARCAL1-205ENST00000425815 FAM110AQ9BQ89 295 aa13.63□□□□□ -0.23
SMARCAL1-205ENST00000425815 PUS1Q9Y606 427 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMARCAL1-205ENST00000425815 CSMD3Q7Z407 3707 aa13.63□□□□□ -0.23
SMARCAL1-205ENST00000425815 CEBPZOSA8MTT3 80 aa13.62□□□□□ -0.23
SMARCAL1-205ENST00000425815 IGKV1-17P01599 117 aa13.62□□□□□ -0.23
SMARCAL1-205ENST00000425815 CCR6P51684 374 aa13.62□□□□□ -0.23
SMARCAL1-205ENST00000425815 BAK1Q16611 211 aa13.62□□□□□ -0.23
SMARCAL1-205ENST00000425815 TMED4Q7Z7H5 227 aa13.62□□□□□ -0.23
SMARCAL1-205ENST00000425815 LGI3Q8N145 548 aa13.62□□□□□ -0.23
SMARCAL1-205ENST00000425815 SDHCQ99643 169 aaPredicted RBP13.62□□□□□ -0.23
SMARCAL1-205ENST00000425815 VSIRQ9H7M9 311 aa13.62□□□□□ -0.23
SMARCAL1-205ENST00000425815 HEYLQ9NQ87 328 aaPredicted RBP13.62□□□□□ -0.23
SMARCAL1-205ENST00000425815 DYNC2H1Q8NCM8 4307 aaKnown RBP13.62□□□□□ -0.23
SMARCAL1-205ENST00000425815 LOC102724200A0A096LPH7 203 aaPredicted RBP13.61□□□□□ -0.23
SMARCAL1-205ENST00000425815 SMCO1Q147U7 214 aa13.61□□□□□ -0.23
SMARCAL1-205ENST00000425815 TMEM128Q5BJH2 165 aa13.61□□□□□ -0.23
SMARCAL1-205ENST00000425815 PRSS54Q6PEW0 395 aa13.61□□□□□ -0.23
SMARCAL1-205ENST00000425815 DEDD2Q8WXF8 326 aa13.61□□□□□ -0.23
SMARCAL1-205ENST00000425815 ST8SIA2Q92186 375 aa13.61□□□□□ -0.23
SMARCAL1-205ENST00000425815 SLC25A21Q9BQT8 299 aaPredicted RBP13.61□□□□□ -0.23
SMARCAL1-205ENST00000425815 HSPB7Q9UBY9 170 aa13.61□□□□□ -0.23
SMARCAL1-205ENST00000425815 PITX3O75364 302 aa13.6□□□□□ -0.23
SMARCAL1-205ENST00000425815 TNFRSF9Q07011 255 aa13.6□□□□□ -0.23
SMARCAL1-205ENST00000425815 TIGITQ495A1 244 aa13.6□□□□□ -0.23
SMARCAL1-205ENST00000425815 SPANXN2Q5MJ10 180 aa13.6□□□□□ -0.23
SMARCAL1-205ENST00000425815 SLC24A4Q8NFF2 622 aa13.6□□□□□ -0.23
SMARCAL1-205ENST00000425815 RNASEH2CQ8TDP1 164 aaKnown RBP13.6□□□□□ -0.23
SMARCAL1-205ENST00000425815 GGTLC1Q9BX51 225 aa13.6□□□□□ -0.23
SMARCAL1-205ENST00000425815 RBKSQ9H477 322 aa13.6□□□□□ -0.23
SMARCAL1-205ENST00000425815 IGHV3-66A0A0C4DH42 116 aa13.59□□□□□ -0.23
SMARCAL1-205ENST00000425815 ANXA3P12429 323 aa13.59□□□□□ -0.23
SMARCAL1-205ENST00000425815 LYL1P12980 280 aa13.59□□□□□ -0.23
SMARCAL1-205ENST00000425815 LRTM2Q8N967 370 aa13.59□□□□□ -0.23
SMARCAL1-205ENST00000425815 SACSQ9NZJ4 4579 aa13.59□□□□□ -0.23
SMARCAL1-205ENST00000425815 OR4C46A6NHA9 309 aa13.58□□□□□ -0.24
SMARCAL1-205ENST00000425815 DFFBO76075 338 aa13.58□□□□□ -0.24
SMARCAL1-205ENST00000425815 SFT2D2O95562 160 aa13.58□□□□□ -0.24
SMARCAL1-205ENST00000425815 IGLC1P0CG04 106 aa13.58□□□□□ -0.24
SMARCAL1-205ENST00000425815 SRPXP78539 464 aa13.58□□□□□ -0.24
SMARCAL1-205ENST00000425815 PPP1R1AQ13522 171 aa13.58□□□□□ -0.24
SMARCAL1-205ENST00000425815 OVOL2Q9BRP0 275 aa13.58□□□□□ -0.24
SMARCAL1-205ENST00000425815 GINS3Q9BRX5 216 aa13.58□□□□□ -0.24
SMARCAL1-205ENST00000425815 CACFD1Q9UGQ2 172 aa13.58□□□□□ -0.24
SMARCAL1-205ENST00000425815 IGKV3-7A0A075B6H7 116 aa13.57□□□□□ -0.24
SMARCAL1-205ENST00000425815 RPS10-NUDT3A0A1W2PQS6 291 aa13.57□□□□□ -0.24
SMARCAL1-205ENST00000425815 NPY1RP25929 384 aa13.57□□□□□ -0.24
SMARCAL1-205ENST00000425815 TFPI2P48307 235 aa13.57□□□□□ -0.24
SMARCAL1-205ENST00000425815 ZNF124Q15973 351 aa13.57□□□□□ -0.24
SMARCAL1-205ENST00000425815 ZFAND6Q6FIF0 208 aa13.57□□□□□ -0.24
SMARCAL1-205ENST00000425815 TCF24Q7RTU0 167 aa13.57□□□□□ -0.24
SMARCAL1-205ENST00000425815 APRG1Q8IVJ8 170 aa13.57□□□□□ -0.24
SMARCAL1-205ENST00000425815 GBGT1Q8N5D6 347 aa13.57□□□□□ -0.24
SMARCAL1-205ENST00000425815 DTD1Q8TEA8 209 aa13.57□□□□□ -0.24
SMARCAL1-205ENST00000425815 U3KQ87 197 aa13.57□□□□□ -0.24
SMARCAL1-205ENST00000425815 RYR2Q92736 4967 aa13.57□□□□□ -0.24
SMARCAL1-205ENST00000425815 TRAV30A0A087WSZ9 112 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms