RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 OR1S1Q8NH92 325 aa9.71□□□□□ -0.86
VRK3-203ENST00000424804 IL22RA2Q969J5 263 aa9.71□□□□□ -0.86
VRK3-203ENST00000424804 WDR89Q96FK6 387 aaPredicted RBP9.71□□□□□ -0.86
VRK3-203ENST00000424804 UFC1Q9Y3C8 167 aa9.71□□□□□ -0.86
VRK3-203ENST00000424804 A0A0B4J2A0 478 aa9.7□□□□□ -0.86
VRK3-203ENST00000424804 TMEM213A2RRL7 107 aa9.7□□□□□ -0.86
VRK3-203ENST00000424804 NAP1L6A6NFF2 107 aa9.7□□□□□ -0.86
VRK3-203ENST00000424804 I3L2K1 104 aa9.7□□□□□ -0.86
VRK3-203ENST00000424804 RNASE2P10153 161 aaKnown RBP9.7□□□□□ -0.86
VRK3-203ENST00000424804 IL7P13232 177 aa9.7□□□□□ -0.86
VRK3-203ENST00000424804 OPRK1P41145 380 aa9.7□□□□□ -0.86
VRK3-203ENST00000424804 SPSB3Q6PJ21 355 aa9.7□□□□□ -0.86
VRK3-203ENST00000424804 BTNL8Q6UX41 500 aa9.7□□□□□ -0.86
VRK3-203ENST00000424804 DUSP18Q8NEJ0 188 aa9.7□□□□□ -0.86
VRK3-203ENST00000424804 DEDD2Q8WXF8 326 aa9.7□□□□□ -0.86
VRK3-203ENST00000424804 SDHCQ99643 169 aaPredicted RBP9.7□□□□□ -0.86
VRK3-203ENST00000424804 SHPKQ9UHJ6 478 aa9.7□□□□□ -0.86
VRK3-203ENST00000424804 A8MWP6 167 aa9.69□□□□□ -0.86
VRK3-203ENST00000424804 OR11H12B2RN74 326 aa9.69□□□□□ -0.86
VRK3-203ENST00000424804 F8W735 103 aaPredicted RBP9.69□□□□□ -0.86
VRK3-203ENST00000424804 SCAF4O95104 1147 aaKnown RBP9.69□□□□□ -0.86
VRK3-203ENST00000424804 ADMP35318 185 aa9.69□□□□□ -0.86
VRK3-203ENST00000424804 PPP1R1AQ13522 171 aa9.69□□□□□ -0.86
VRK3-203ENST00000424804 SMCO1Q147U7 214 aa9.69□□□□□ -0.86
VRK3-203ENST00000424804 ANKRD55Q3KP44 614 aa9.69□□□□□ -0.86
VRK3-203ENST00000424804 OR52E5Q8NH55 327 aa9.69□□□□□ -0.86
VRK3-203ENST00000424804 TMEM190Q8WZ59 177 aa9.69□□□□□ -0.86
VRK3-203ENST00000424804 SRD5A3Q9H8P0 318 aa9.69□□□□□ -0.86
VRK3-203ENST00000424804 TECRQ9NZ01 308 aaKnown RBP9.69□□□□□ -0.86
VRK3-203ENST00000424804 MLXQ9UH92 298 aa9.69□□□□□ -0.86
VRK3-203ENST00000424804 FLVCR2Q9UPI3 526 aa9.69□□□□□ -0.86
VRK3-203ENST00000424804 IGHV3-49A0A0A0MS15 119 aa9.68□□□□□ -0.86
VRK3-203ENST00000424804 CORTO00230 105 aa9.68□□□□□ -0.86
VRK3-203ENST00000424804 NDUFA4O00483 81 aa9.68□□□□□ -0.86
VRK3-203ENST00000424804 SFT2D2O95562 160 aa9.68□□□□□ -0.86
VRK3-203ENST00000424804 CTSGP08311 255 aa9.68□□□□□ -0.86
VRK3-203ENST00000424804 HOXB5P09067 269 aa9.68□□□□□ -0.86
VRK3-203ENST00000424804 C8orf88P0DMB2 117 aa9.68□□□□□ -0.86
VRK3-203ENST00000424804 HTR2BP41595 481 aa9.68□□□□□ -0.86
VRK3-203ENST00000424804 NPBWR1P48145 328 aa9.68□□□□□ -0.86
VRK3-203ENST00000424804 RELQ04864 619 aaPredicted RBP9.68□□□□□ -0.86
VRK3-203ENST00000424804 CNPY1Q3B7I2 92 aa9.68□□□□□ -0.86
VRK3-203ENST00000424804 RBPMS2Q6ZRY4 209 aaKnown RBP9.68□□□□□ -0.86
VRK3-203ENST00000424804 TMEM61Q8N0U2 210 aa9.68□□□□□ -0.86
VRK3-203ENST00000424804 SLC24A4Q8NFF2 622 aa9.68□□□□□ -0.86
VRK3-203ENST00000424804 ZNF436Q9C0F3 470 aaPredicted RBP9.68□□□□□ -0.86
VRK3-203ENST00000424804 RBKSQ9H477 322 aa9.68□□□□□ -0.86
VRK3-203ENST00000424804 INS-IGF2F8WCM5 200 aa9.67□□□□□ -0.86
VRK3-203ENST00000424804 NDUFB6O95139 128 aa9.67□□□□□ -0.86
VRK3-203ENST00000424804 IFNA10P01566 189 aa9.67□□□□□ -0.86
VRK3-203ENST00000424804 MLANAQ16655 118 aa9.67□□□□□ -0.86
VRK3-203ENST00000424804 C4orf46Q504U0 113 aa9.67□□□□□ -0.86
VRK3-203ENST00000424804 NMSQ5H8A3 153 aa9.67□□□□□ -0.86
VRK3-203ENST00000424804 DTD1Q8TEA8 209 aa9.67□□□□□ -0.86
VRK3-203ENST00000424804 MARC2Q969Z3 335 aa9.67□□□□□ -0.86
VRK3-203ENST00000424804 ZNF414Q96IQ9 312 aa9.67□□□□□ -0.86
VRK3-203ENST00000424804 TXN2Q99757 166 aa9.67□□□□□ -0.86
VRK3-203ENST00000424804 C7orf50Q9BRJ6 194 aaKnown RBP9.67□□□□□ -0.86
VRK3-203ENST00000424804 OVOL2Q9BRP0 275 aa9.67□□□□□ -0.86
VRK3-203ENST00000424804 DAZ1Q9NQZ3 744 aaKnown RBP9.67□□□□□ -0.86
VRK3-203ENST00000424804 MRPL27Q9P0M9 148 aaKnown RBP9.67□□□□□ -0.86
VRK3-203ENST00000424804 PAIP2BQ9ULR5 123 aaKnown RBP9.67□□□□□ -0.86
VRK3-203ENST00000424804 VPS13DQ5THJ4 4388 aa9.66□□□□□ -0.86
VRK3-203ENST00000424804 IGHV3OR16-13A0A075B7E8 117 aa9.66□□□□□ -0.86
VRK3-203ENST00000424804 IGHV3-74A0A0B4J1X5 117 aa9.66□□□□□ -0.86
VRK3-203ENST00000424804 PIGBOS1A0A0B4J2F0 54 aa9.66□□□□□ -0.86
VRK3-203ENST00000424804 IAPPP10997 89 aa9.66□□□□□ -0.86
VRK3-203ENST00000424804 ANXA7P20073 488 aaKnown RBP9.66□□□□□ -0.86
VRK3-203ENST00000424804 NPY1RP25929 384 aa9.66□□□□□ -0.86
VRK3-203ENST00000424804 ELLP55199 621 aaPredicted RBP9.66□□□□□ -0.86
VRK3-203ENST00000424804 TNFRSF9Q07011 255 aa9.66□□□□□ -0.86
VRK3-203ENST00000424804 OR52B4Q8NGK2 314 aa9.66□□□□□ -0.86
VRK3-203ENST00000424804 ATP6V0BQ99437 205 aa9.66□□□□□ -0.86
VRK3-203ENST00000424804 FNDC4Q9H6D8 234 aaPredicted RBP9.66□□□□□ -0.86
VRK3-203ENST00000424804 IGKV3-7A0A075B6H7 116 aa9.65□□□□□ -0.86
VRK3-203ENST00000424804 A0A1B0GU03 582 aa9.65□□□□□ -0.86
VRK3-203ENST00000424804 DUXBA0A1W2PPF3 345 aa9.65□□□□□ -0.86
VRK3-203ENST00000424804 RPS10-NUDT3A0A1W2PQS6 291 aa9.65□□□□□ -0.86
VRK3-203ENST00000424804 C9orf170A2RU37 121 aa9.65□□□□□ -0.86
VRK3-203ENST00000424804 A6NHS1 94 aa9.65□□□□□ -0.86
VRK3-203ENST00000424804 LYRM1O43325 122 aa9.65□□□□□ -0.86
VRK3-203ENST00000424804 TMEM50AO95807 157 aa9.65□□□□□ -0.86
VRK3-203ENST00000424804 OR4E1P0C645 316 aa9.65□□□□□ -0.86
VRK3-203ENST00000424804 EWSR1Q01844 656 aaKnown RBP eCLIP9.65□□□□□ -0.86
VRK3-203ENST00000424804 AARDQ4LEZ3 155 aa9.65□□□□□ -0.86
VRK3-203ENST00000424804 C2orf83Q53S99 150 aa9.65□□□□□ -0.86
VRK3-203ENST00000424804 COQ8AQ8NI60 647 aa9.65□□□□□ -0.86
VRK3-203ENST00000424804 MAGT1Q9H0U3 335 aa9.65□□□□□ -0.86
VRK3-203ENST00000424804 MRPL36Q9P0J6 103 aaKnown RBP9.65□□□□□ -0.86
VRK3-203ENST00000424804 HSPB7Q9UBY9 170 aa9.65□□□□□ -0.86
VRK3-203ENST00000424804 CACFD1Q9UGQ2 172 aa9.65□□□□□ -0.86
VRK3-203ENST00000424804 TRAV6A0A075B6T7 132 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 SCGB2A1O75556 95 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 ADAP1O75689 374 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 IFNA4P05014 189 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 FCGR2BP31994 310 aaPredicted RBP9.64□□□□□ -0.87
VRK3-203ENST00000424804 BTCP35070 178 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 RND2P52198 227 aa9.64□□□□□ -0.87
VRK3-203ENST00000424804 UBE2MP61081 183 aaKnown RBP9.64□□□□□ -0.87
VRK3-203ENST00000424804 BSXQ3C1V8 233 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms