RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 RHOGP84095 191 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 PLGLB1Q02325 96 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 CCSMST1Q4G0I0 132 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 HSD17B12Q53GQ0 312 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 MEIG1Q5JSS6 88 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 C3orf22Q8N5N4 141 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 CD177Q8N6Q3 437 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 OR5D14Q8NGL3 314 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 OR8D4Q8NGM9 314 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 DCANP1Q8TF63 244 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 MAL2Q969L2 176 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 C1orf147Q96MC9 270 aaPredicted RBP2.58□□□□□ -2
SF3B1-205ENST00000424674 LITAFQ99732 161 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 ZNF586Q9NXT0 402 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 TP73-AS1Q9UF72 201 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 RNF11Q9Y3C5 154 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 MPC1Q9Y5U8 109 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 IER3IP1Q9Y5U9 82 aa2.58□□□□□ -2
SF3B1-205ENST00000424674 COL5A2P05997 1499 aaPredicted RBP2.58□□□□□ -2
SF3B1-205ENST00000424674 KIF13BQ9NQT8 1826 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 ZNF106Q9H2Y7 1883 aaKnown RBP2.57□□□□□ -2
SF3B1-205ENST00000424674 TRAV27A0A087WT01 109 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 A0A1B0GVX0 72 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 A8MWV9 139 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 BUB1B-PAK6H3BSN5 160 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 ZNF324O75467 553 aaPredicted RBP2.57□□□□□ -2
SF3B1-205ENST00000424674 IGLV3-25P01717 112 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 IGHV4-34P06331 123 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 NPPCP23582 126 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 CRHBPP24387 322 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 ZNF93P35789 620 aaPredicted RBP2.57□□□□□ -2
SF3B1-205ENST00000424674 RPL27AP46776 148 aaKnown RBP2.57□□□□□ -2
SF3B1-205ENST00000424674 TPPP2P59282 170 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 GNB2P62879 340 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 HBBP68871 147 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 MEF2BQ02080 365 aaPredicted RBP2.57□□□□□ -2
SF3B1-205ENST00000424674 AKR1C1Q04828 323 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 RPL18Q07020 188 aaKnown RBP2.57□□□□□ -2
SF3B1-205ENST00000424674 HSD52Q0P140 79 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 HES1Q14469 280 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 LGALS9BQ3B8N2 356 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 LINC01554Q52M75 96 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 LUZP6Q538Z0 58 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 ZNF678Q5SXM1 525 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 LGALS9CQ6DKI2 356 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 SNX29P2Q8IUI4 249 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 PCP2Q8IVA1 136 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 AMN1Q8IY45 258 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 C11orf42Q8N5U0 333 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 OR5H6Q8NGV6 325 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 BRK1Q8WUW1 75 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 NAT14Q8WUY8 206 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 MIEN1Q9BRT3 115 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 TSSK6Q9BXA6 273 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 DEFB126Q9BYW3 111 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 Q9H521 79 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 DUSP21Q9H596 190 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 TAS2R8Q9NYW2 309 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 ZNF835Q9Y2P0 537 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 V9GYS6 101 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 KDM6AO15550 1401 aaPredicted RBP2.57□□□□□ -2
SF3B1-205ENST00000424674 ABCC10Q5T3U5 1492 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 HECW1Q76N89 1606 aa2.57□□□□□ -2
SF3B1-205ENST00000424674 ADAMTSL1Q8N6G6 1762 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 IGLV3-10A0A075B6K4 115 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 TRGV10A0A0A0MS01 117 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 IGHV1-3A0A0C4DH29 117 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 A0A0D9SEW6 157 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 TRBV27A0A0K0K1C4 114 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 PNMA8CA0A1B0GUJ8 204 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 ODAMA1E959 279 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 ZNF727A8MUV8 499 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 TMEM256-PLSCR3K7ERE1 68 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 TNFP01375 233 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 HLA-DQA1P01909 254 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 OR5AC1P0C628 307 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 P0C879 139 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 IGHV3-30-3P0DP02 117 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 DYNLT3P51808 116 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 CRISP3P54108 245 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 CMC4P56277 68 aaPredicted RBP2.56□□□□□ -2
SF3B1-205ENST00000424674 FXYD7P58549 80 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 TSPEAR-AS2P59090 65 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 MYL5Q02045 173 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 C14orf177Q52M58 125 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 FAAP20Q6NZ36 180 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 LCN15Q6UWW0 184 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 RPS19BP1Q86WX3 136 aaKnown RBP2.56□□□□□ -2
SF3B1-205ENST00000424674 ZFAND2AQ8N6M9 145 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 STAG3L4Q8TBR4 150 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 TMEM158Q8WZ71 300 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 RNASE6Q93091 150 aaKnown RBP2.56□□□□□ -2
SF3B1-205ENST00000424674 C16orf74Q96GX8 76 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 SDF2Q99470 211 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 SNRNP25Q9BV90 132 aaKnown RBP2.56□□□□□ -2
SF3B1-205ENST00000424674 SNHG12Q9BXW3 62 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 MRPL32Q9BYC8 188 aaKnown RBP2.56□□□□□ -2
SF3B1-205ENST00000424674 BANF2Q9H503 90 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 FAM60AQ9NP50 221 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 C21orf62Q9NYP8 219 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms