RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 PRAF2O60831 178 aa14.03□□□□□ -0.16
HDAC6-205ENST00000423941 SAP30O75446 220 aa14.03□□□□□ -0.16
HDAC6-205ENST00000423941 LY86O95711 162 aa14.03□□□□□ -0.16
HDAC6-205ENST00000423941 TMEM50AO95807 157 aa14.03□□□□□ -0.16
HDAC6-205ENST00000423941 IGHV3-48P01763 117 aa14.03□□□□□ -0.16
HDAC6-205ENST00000423941 UNQ9165/PRO28630Q6UXU0 137 aa14.03□□□□□ -0.16
HDAC6-205ENST00000423941 OR4X1Q8NH49 305 aa14.03□□□□□ -0.16
HDAC6-205ENST00000423941 OR4C12Q96R67 309 aa14.03□□□□□ -0.16
HDAC6-205ENST00000423941 AURKAIP1Q9NWT8 199 aaPredicted RBP14.03□□□□□ -0.16
HDAC6-205ENST00000423941 SNRPGP15A8MWD9 76 aa14.02□□□□□ -0.17
HDAC6-205ENST00000423941 INMT-MINDY4F8WBC2 141 aa14.02□□□□□ -0.17
HDAC6-205ENST00000423941 C8orf88P0DMB2 117 aa14.02□□□□□ -0.17
HDAC6-205ENST00000423941 NPBWR1P48145 328 aa14.02□□□□□ -0.17
HDAC6-205ENST00000423941 ELLP55199 621 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-205ENST00000423941 IL15RAQ13261 267 aa14.02□□□□□ -0.17
HDAC6-205ENST00000423941 IAH1Q2TAA2 248 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-205ENST00000423941 Q56UQ5 140 aa14.02□□□□□ -0.17
HDAC6-205ENST00000423941 ZBTB8BQ8NAP8 495 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-205ENST00000423941 TMEM116Q8NCL8 245 aa14.02□□□□□ -0.17
HDAC6-205ENST00000423941 CIB3Q96Q77 187 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-205ENST00000423941 PALMDQ9NP74 551 aa14.02□□□□□ -0.17
HDAC6-205ENST00000423941 ZC4H2Q9NQZ6 224 aa14.02□□□□□ -0.17
HDAC6-205ENST00000423941 SORL1Q92673 2214 aa14.01□□□□□ -0.17
HDAC6-205ENST00000423941 TMEM213A2RRL7 107 aa14.01□□□□□ -0.17
HDAC6-205ENST00000423941 C2orf70A6NJV1 201 aa14.01□□□□□ -0.17
HDAC6-205ENST00000423941 NDUFA4O00483 81 aa14.01□□□□□ -0.17
HDAC6-205ENST00000423941 IFNA10P01566 189 aa14.01□□□□□ -0.17
HDAC6-205ENST00000423941 SLC25A4P12235 298 aa14.01□□□□□ -0.17
HDAC6-205ENST00000423941 OPRK1P41145 380 aa14.01□□□□□ -0.17
HDAC6-205ENST00000423941 NKX2-1P43699 371 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-205ENST00000423941 MAGT1Q9H0U3 335 aa14.01□□□□□ -0.17
HDAC6-205ENST00000423941 GPN1Q9HCN4 374 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-205ENST00000423941 RPS10-NUDT3A0A1W2PQS6 291 aa14□□□□□ -0.17
HDAC6-205ENST00000423941 NUPL2O15504 423 aaKnown RBP14□□□□□ -0.17
HDAC6-205ENST00000423941 GNG7O60262 68 aa14□□□□□ -0.17
HDAC6-205ENST00000423941 CLN5O75503 358 aa14□□□□□ -0.17
HDAC6-205ENST00000423941 SPNP16150 400 aa14□□□□□ -0.17
HDAC6-205ENST00000423941 PAX9P55771 341 aa14□□□□□ -0.17
HDAC6-205ENST00000423941 POLR2GP62487 172 aaKnown RBP eCLIP14□□□□□ -0.17
HDAC6-205ENST00000423941 CD69Q07108 199 aa14□□□□□ -0.17
HDAC6-205ENST00000423941 PRSS54Q6PEW0 395 aa14□□□□□ -0.17
HDAC6-205ENST00000423941 UBAC2Q8NBM4 344 aa14□□□□□ -0.17
HDAC6-205ENST00000423941 TMEM190Q8WZ59 177 aa14□□□□□ -0.17
HDAC6-205ENST00000423941 IGHV3-35A0A0C4DH35 117 aa13.99□□□□□ -0.17
HDAC6-205ENST00000423941 PRSS46E5RG02 174 aa13.99□□□□□ -0.17
HDAC6-205ENST00000423941 K7EMT4 169 aa13.99□□□□□ -0.17
HDAC6-205ENST00000423941 WRBO00258 174 aa13.99□□□□□ -0.17
HDAC6-205ENST00000423941 CCSO14618 274 aa13.99□□□□□ -0.17
HDAC6-205ENST00000423941 PTTG1O95997 202 aa13.99□□□□□ -0.17
HDAC6-205ENST00000423941 PRB2P02812 416 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-205ENST00000423941 IAPPP10997 89 aa13.99□□□□□ -0.17
HDAC6-205ENST00000423941 FOLR2P14207 255 aa13.99□□□□□ -0.17
HDAC6-205ENST00000423941 EDN2P20800 178 aa13.99□□□□□ -0.17
HDAC6-205ENST00000423941 CBLN1P23435 193 aa13.99□□□□□ -0.17
HDAC6-205ENST00000423941 GPX4P36969 197 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-205ENST00000423941 ETFRF1Q6IPR1 90 aa13.99□□□□□ -0.17
HDAC6-205ENST00000423941 CACNG8Q8WXS5 425 aa13.99□□□□□ -0.17
HDAC6-205ENST00000423941 SMIM8Q96KF7 97 aa13.99□□□□□ -0.17
HDAC6-205ENST00000423941 C2orf50Q96LR7 162 aa13.99□□□□□ -0.17
HDAC6-205ENST00000423941 WI2-2373I1.2A0A1W2PRP0 233 aa13.98□□□□□ -0.17
HDAC6-205ENST00000423941 ZNF320A2RRD8 509 aa13.98□□□□□ -0.17
HDAC6-205ENST00000423941 IGKV1-17P01599 117 aa13.98□□□□□ -0.17
HDAC6-205ENST00000423941 MBPP02686 304 aaPredicted RBP13.98□□□□□ -0.17
HDAC6-205ENST00000423941 RELQ04864 619 aaPredicted RBP13.98□□□□□ -0.17
HDAC6-205ENST00000423941 TM4SF20Q53R12 229 aa13.98□□□□□ -0.17
HDAC6-205ENST00000423941 UXS1Q8NBZ7 420 aa13.98□□□□□ -0.17
HDAC6-205ENST00000423941 OR2K2Q8NGT1 345 aa13.98□□□□□ -0.17
HDAC6-205ENST00000423941 MARC2Q969Z3 335 aa13.98□□□□□ -0.17
HDAC6-205ENST00000423941 TRAV30A0A087WSZ9 112 aa13.97□□□□□ -0.17
HDAC6-205ENST00000423941 K7EIL1 84 aa13.97□□□□□ -0.17
HDAC6-205ENST00000423941 TAS2R30P59541 319 aa13.97□□□□□ -0.17
HDAC6-205ENST00000423941 DEFB114Q30KQ6 69 aa13.97□□□□□ -0.17
HDAC6-205ENST00000423941 RAB40CQ96S21 281 aa13.97□□□□□ -0.17
HDAC6-205ENST00000423941 C11orf1Q9H5F2 150 aa13.97□□□□□ -0.17
HDAC6-205ENST00000423941 MRPL27Q9P0M9 148 aaKnown RBP13.97□□□□□ -0.17
HDAC6-205ENST00000423941 GSKIPQ9P0R6 139 aa13.97□□□□□ -0.17
HDAC6-205ENST00000423941 ZNF256Q9Y2P7 627 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-205ENST00000423941 RCL1Q9Y2P8 373 aaKnown RBP13.97□□□□□ -0.17
HDAC6-205ENST00000423941 UFC1Q9Y3C8 167 aa13.97□□□□□ -0.17
HDAC6-205ENST00000423941 C7orf66A4D0T2 115 aa13.96□□□□□ -0.17
HDAC6-205ENST00000423941 PMS2P5A8MQ11 134 aa13.96□□□□□ -0.17
HDAC6-205ENST00000423941 IFNA4P05014 189 aa13.96□□□□□ -0.17
HDAC6-205ENST00000423941 IGLC1P0CG04 106 aa13.96□□□□□ -0.17
HDAC6-205ENST00000423941 RND2P52198 227 aa13.96□□□□□ -0.17
HDAC6-205ENST00000423941 RAB11AP62491 216 aa13.96□□□□□ -0.17
HDAC6-205ENST00000423941 RPP30P78346 268 aaKnown RBP13.96□□□□□ -0.17
HDAC6-205ENST00000423941 ZNF600Q6ZNG1 722 aa13.96□□□□□ -0.17
HDAC6-205ENST00000423941 DAZ1Q9NQZ3 744 aaKnown RBP13.96□□□□□ -0.17
HDAC6-205ENST00000423941 TECRQ9NZ01 308 aaKnown RBP13.96□□□□□ -0.17
HDAC6-205ENST00000423941 YPEL3P61236 119 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-205ENST00000423941 GAMTQ14353 236 aa13.95□□□□□ -0.18
HDAC6-205ENST00000423941 GSG1LQ6UXU4 331 aa13.95□□□□□ -0.18
HDAC6-205ENST00000423941 SLC16A13Q7RTY0 426 aa13.95□□□□□ -0.18
HDAC6-205ENST00000423941 HAPLN4Q86UW8 402 aa13.95□□□□□ -0.18
HDAC6-205ENST00000423941 NPIPB3Q92617 1050 aa13.95□□□□□ -0.18
HDAC6-205ENST00000423941 ZFAND3Q9H8U3 227 aa13.95□□□□□ -0.18
HDAC6-205ENST00000423941 MLXQ9UH92 298 aa13.95□□□□□ -0.18
HDAC6-205ENST00000423941 STRAPQ9Y3F4 350 aaKnown RBP13.95□□□□□ -0.18
HDAC6-205ENST00000423941 LSM4Q9Y4Z0 139 aaKnown RBP13.95□□□□□ -0.18
HDAC6-205ENST00000423941 C5orf51A6NDU8 294 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms