RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 TRBV12-3P01733 135 aa12.15□□□□□ -0.46
DDX55-203ENST00000421670 LGALS1P09382 135 aaKnown RBP12.15□□□□□ -0.46
DDX55-203ENST00000421670 P2RY1P47900 373 aa12.15□□□□□ -0.46
DDX55-203ENST00000421670 CD300CQ08708 224 aa12.15□□□□□ -0.46
DDX55-203ENST00000421670 ARL16Q0P5N6 197 aa12.15□□□□□ -0.46
DDX55-203ENST00000421670 TMEM252Q8N6L7 170 aa12.15□□□□□ -0.46
DDX55-203ENST00000421670 ZNF502Q8TBZ5 544 aa12.15□□□□□ -0.46
DDX55-203ENST00000421670 VN1R17PQ8TDU5 208 aa12.15□□□□□ -0.46
DDX55-203ENST00000421670 C4orf3Q8WVX3 66 aa12.15□□□□□ -0.46
DDX55-203ENST00000421670 EEF1AKMT3Q96AZ1 226 aa12.15□□□□□ -0.46
DDX55-203ENST00000421670 CXorf58Q96LI9 332 aa12.15□□□□□ -0.46
DDX55-203ENST00000421670 PKD1L1Q8TDX9 2849 aa12.15□□□□□ -0.46
DDX55-203ENST00000421670 FXYD6-FXYD2A0A087WZ82 144 aa12.14□□□□□ -0.47
DDX55-203ENST00000421670 CD69Q07108 199 aa12.14□□□□□ -0.47
DDX55-203ENST00000421670 ZNF343Q6P1L6 599 aa12.14□□□□□ -0.47
DDX55-203ENST00000421670 ACSM6Q6P461 480 aa12.14□□□□□ -0.47
DDX55-203ENST00000421670 ACOT7LQ6ZUV0 252 aa12.14□□□□□ -0.47
DDX55-203ENST00000421670 SLC16A13Q7RTY0 426 aa12.14□□□□□ -0.47
DDX55-203ENST00000421670 NDUFA11Q86Y39 141 aa12.14□□□□□ -0.47
DDX55-203ENST00000421670 STX12Q86Y82 276 aa12.14□□□□□ -0.47
DDX55-203ENST00000421670 TMEM217Q8N7C4 229 aa12.14□□□□□ -0.47
DDX55-203ENST00000421670 ZC4H2Q9NQZ6 224 aa12.14□□□□□ -0.47
DDX55-203ENST00000421670 C21orf62Q9NYP8 219 aa12.14□□□□□ -0.47
DDX55-203ENST00000421670 OR2T8A6NH00 312 aa12.13□□□□□ -0.47
DDX55-203ENST00000421670 F8W735 103 aaPredicted RBP12.13□□□□□ -0.47
DDX55-203ENST00000421670 I3L521 148 aa12.13□□□□□ -0.47
DDX55-203ENST00000421670 GPR183P32249 361 aa12.13□□□□□ -0.47
DDX55-203ENST00000421670 EWSR1Q01844 656 aaKnown RBP eCLIP12.13□□□□□ -0.47
DDX55-203ENST00000421670 CLEC19AQ6UXS0 136 aa12.13□□□□□ -0.47
DDX55-203ENST00000421670 ACY3Q96HD9 319 aa12.13□□□□□ -0.47
DDX55-203ENST00000421670 DUX3Q96PT4 197 aa12.13□□□□□ -0.47
DDX55-203ENST00000421670 TRBV7-1A0A0A6YYK4 115 aa12.13□□□□□ -0.47
DDX55-203ENST00000421670 RPS10-NUDT3A0A1W2PQS6 291 aa12.13□□□□□ -0.47
DDX55-203ENST00000421670 PPP5D1E7EU14 171 aa12.13□□□□□ -0.47
DDX55-203ENST00000421670 SLC25A4P12235 298 aa12.13□□□□□ -0.47
DDX55-203ENST00000421670 SULT1A1P50225 295 aa12.13□□□□□ -0.47
DDX55-203ENST00000421670 NHLH2Q02577 135 aa12.13□□□□□ -0.47
DDX55-203ENST00000421670 Q56UQ5 140 aa12.13□□□□□ -0.47
DDX55-203ENST00000421670 OR10P1Q8NGE3 313 aa12.13□□□□□ -0.47
DDX55-203ENST00000421670 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.12□□□□□ -0.47
DDX55-203ENST00000421670 RPL12P30050 165 aaKnown RBP12.12□□□□□ -0.47
DDX55-203ENST00000421670 RND2P52198 227 aa12.12□□□□□ -0.47
DDX55-203ENST00000421670 MFAP4P55083 255 aa12.12□□□□□ -0.47
DDX55-203ENST00000421670 SLC38A11Q08AI6 406 aa12.12□□□□□ -0.47
DDX55-203ENST00000421670 ETFRF1Q6IPR1 90 aa12.12□□□□□ -0.47
DDX55-203ENST00000421670 SHISA2Q6UWI4 295 aa12.12□□□□□ -0.47
DDX55-203ENST00000421670 TCTE3Q8IZS6 198 aa12.12□□□□□ -0.47
DDX55-203ENST00000421670 BSCL2Q96G97 398 aaPredicted RBP12.12□□□□□ -0.47
DDX55-203ENST00000421670 SLC25A31Q9H0C2 315 aa12.12□□□□□ -0.47
DDX55-203ENST00000421670 IGHV4OR15-8A0A075B7B6 117 aa12.11□□□□□ -0.47
DDX55-203ENST00000421670 A0A087WW49 117 aa12.11□□□□□ -0.47
DDX55-203ENST00000421670 CLEC3BP05452 202 aa12.11□□□□□ -0.47
DDX55-203ENST00000421670 GPX4P36969 197 aaPredicted RBP12.11□□□□□ -0.47
DDX55-203ENST00000421670 RUNX1Q01196 453 aa12.11□□□□□ -0.47
DDX55-203ENST00000421670 GAMTQ14353 236 aa12.11□□□□□ -0.47
DDX55-203ENST00000421670 KRTAP21-3Q3LHN1 58 aa12.11□□□□□ -0.47
DDX55-203ENST00000421670 ZNF546Q86UE3 836 aa12.11□□□□□ -0.47
DDX55-203ENST00000421670 LILRB2Q8N423 598 aa12.11□□□□□ -0.47
DDX55-203ENST00000421670 OR11H4Q8NGC9 324 aa12.11□□□□□ -0.47
DDX55-203ENST00000421670 RAX2Q96IS3 184 aa12.11□□□□□ -0.47
DDX55-203ENST00000421670 SLC35E1Q96K37 410 aa12.11□□□□□ -0.47
DDX55-203ENST00000421670 NEURL2Q9BR09 285 aa12.11□□□□□ -0.47
DDX55-203ENST00000421670 PEF1Q9UBV8 284 aaKnown RBP12.11□□□□□ -0.47
DDX55-203ENST00000421670 SMCO3A2RU48 225 aa12.1□□□□□ -0.47
DDX55-203ENST00000421670 BMPR1BO00238 502 aa12.1□□□□□ -0.47
DDX55-203ENST00000421670 GNG7O60262 68 aa12.1□□□□□ -0.47
DDX55-203ENST00000421670 ARL3P36405 182 aa12.1□□□□□ -0.47
DDX55-203ENST00000421670 OR11H1Q8NG94 326 aa12.1□□□□□ -0.47
DDX55-203ENST00000421670 OR5C1Q8NGR4 320 aa12.1□□□□□ -0.47
DDX55-203ENST00000421670 OR4X1Q8NH49 305 aa12.1□□□□□ -0.47
DDX55-203ENST00000421670 CACNG8Q8WXS5 425 aa12.1□□□□□ -0.47
DDX55-203ENST00000421670 NPIPB3Q92617 1050 aa12.1□□□□□ -0.47
DDX55-203ENST00000421670 CHRDL1Q9BU40 450 aa12.1□□□□□ -0.47
DDX55-203ENST00000421670 TNFSF18Q9UNG2 199 aa12.1□□□□□ -0.47
DDX55-203ENST00000421670 HSPB11Q9Y547 144 aa12.1□□□□□ -0.47
DDX55-203ENST00000421670 RNF222A6NCQ9 220 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 ARPC5O15511 151 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 TGOLN2O43493 480 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 FCGR2BP31994 310 aaPredicted RBP12.09□□□□□ -0.47
DDX55-203ENST00000421670 NPBWR1P48145 328 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 HBG1P69891 147 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 HBG2P69892 147 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 DLK1P80370 383 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 AKR1C1Q04828 323 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 BAXQ07812 192 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 TMEM116Q8NCL8 245 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 IGHV3-35A0A0C4DH35 117 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 CLN5O75503 358 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 HSPB1P04792 205 aaKnown RBP12.09□□□□□ -0.47
DDX55-203ENST00000421670 ADMP35318 185 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 AP2S1P53680 142 aaPredicted RBP12.09□□□□□ -0.47
DDX55-203ENST00000421670 CLINT1Q14677 625 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 INO80EQ8NBZ0 244 aaPredicted RBP12.09□□□□□ -0.47
DDX55-203ENST00000421670 OR1N2Q8NGR9 330 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 AQP10Q96PS8 301 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 TXN2Q99757 166 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 SMIM3Q9BZL3 60 aa12.09□□□□□ -0.47
DDX55-203ENST00000421670 CMYA5Q8N3K9 4069 aa12.08□□□□□ -0.47
DDX55-203ENST00000421670 IGKV1OR2-108A0A075B7D4 117 aa12.08□□□□□ -0.48
DDX55-203ENST00000421670 UBE2L5PA0A1B0GUS4 154 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms