RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 SLIRPQ9GZT3 109 aaKnown RBP5.86□□□□□ -1.47
VIM-202ENST00000421459 TMEM50AO95807 157 aa5.85□□□□□ -1.47
VIM-202ENST00000421459 EIF4EP06730 217 aaKnown RBP5.85□□□□□ -1.47
VIM-202ENST00000421459 ZNF688P0C7X2 276 aa5.85□□□□□ -1.47
VIM-202ENST00000421459 NAT1P18440 290 aa5.85□□□□□ -1.47
VIM-202ENST00000421459 RPS19P39019 145 aaKnown RBP5.85□□□□□ -1.47
VIM-202ENST00000421459 SCAND1P57086 179 aa5.85□□□□□ -1.47
VIM-202ENST00000421459 HSPE1P61604 102 aaKnown RBP5.85□□□□□ -1.47
VIM-202ENST00000421459 PRCDQ00LT1 54 aa5.85□□□□□ -1.47
VIM-202ENST00000421459 C12orf74Q32Q52 190 aa5.85□□□□□ -1.47
VIM-202ENST00000421459 GSG1LQ6UXU4 331 aa5.85□□□□□ -1.47
VIM-202ENST00000421459 H2BFWTQ7Z2G1 175 aa5.85□□□□□ -1.47
VIM-202ENST00000421459 CMTM1Q8IZ96 169 aa5.85□□□□□ -1.47
VIM-202ENST00000421459 CADM3Q8N126 398 aa5.85□□□□□ -1.47
VIM-202ENST00000421459 STXBP6Q8NFX7 210 aa5.85□□□□□ -1.47
VIM-202ENST00000421459 OR6F1Q8NGZ6 308 aa5.85□□□□□ -1.47
VIM-202ENST00000421459 KRTAP4-5Q9BYR2 181 aa5.85□□□□□ -1.47
VIM-202ENST00000421459 FKBP11Q9NYL4 201 aa5.85□□□□□ -1.47
VIM-202ENST00000421459 TRAV10A0A0B4J240 114 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 A0A0B4J293 547 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 C11orf94C9JXX5 98 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 K7EQG2 157 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 RTL8CO15255 209 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 TMEM127O75204 238 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 IGKV1-5P01602 117 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 PI3P19957 117 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 ETV6P41212 452 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 ACTL10Q5JWF8 245 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 TMEM69Q5SWH9 247 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 ZNF600Q6ZNG1 722 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 SAMD12Q8N8I0 201 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 ZNF114Q8NC26 417 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 CSNK1G2-AS1Q8NCQ2 148 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 DUSP18Q8NEJ0 188 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 BORCS5Q969J3 196 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 S100A16Q96FQ6 103 aaKnown RBP5.84□□□□□ -1.47
VIM-202ENST00000421459 TSC22D3Q99576 134 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 GINS3Q9BRX5 216 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 HRH4Q9H3N8 390 aa5.84□□□□□ -1.47
VIM-202ENST00000421459 FNDC4Q9H6D8 234 aaPredicted RBP5.84□□□□□ -1.47
VIM-202ENST00000421459 APOBP04114 4563 aaKnown RBP5.84□□□□□ -1.47
VIM-202ENST00000421459 DNAH5Q8TE73 4624 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 A0A0G2JRQ6 117 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 PRSS29PA6NIE9 313 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 ZNF705EA8MWA4 302 aaPredicted RBP5.83□□□□□ -1.48
VIM-202ENST00000421459 M0QYG6 137 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 RNASE2P10153 161 aaKnown RBP5.83□□□□□ -1.48
VIM-202ENST00000421459 MIFP14174 115 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 NPPCP23582 126 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 PRSS3P35030 304 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 P2RY1P47900 373 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 NPBWR1P48145 328 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 RORCP51449 518 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 TCTAP57738 103 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 TAS2R46P59540 309 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 DEFB1P60022 68 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 TSPAN5P62079 268 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 ERHP84090 104 aaKnown RBP5.83□□□□□ -1.48
VIM-202ENST00000421459 TIGITQ495A1 244 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 RNASE12Q5GAN4 147 aaKnown RBP5.83□□□□□ -1.48
VIM-202ENST00000421459 UBE2NLQ5JXB2 153 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 LCE2DQ5TA82 110 aaPredicted RBP5.83□□□□□ -1.48
VIM-202ENST00000421459 SNX29P2Q8IUI4 249 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 CROCCP3Q8IVE0 287 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 DCANP1Q8TF63 244 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 PLA2G2EQ9NZK7 142 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 TBC1D24Q9ULP9 559 aa5.83□□□□□ -1.48
VIM-202ENST00000421459 DEFB131BA0A096LNP1 70 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 TRAV2A0A0B4J234 112 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 IFNA17P01571 189 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 IGKV1-17P01599 117 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 CRYBB3P26998 211 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 SNCAP37840 140 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 DHRS2Q13268 280 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 SP6Q3SY56 376 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 PSMG4Q5JS54 123 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 PVRIGQ6DKI7 326 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 LINC00336Q6ZUF6 198 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 SLC35G3Q8N808 338 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 MCFD2Q8NI22 146 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 GPX8Q8TED1 209 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 TMEM230Q96A57 120 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 RAB40CQ96S21 281 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 TP53RKQ96S44 253 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 XCL2Q9UBD3 114 aa5.82□□□□□ -1.48
VIM-202ENST00000421459 IGLV2-18A0A075B6J9 118 aa5.81□□□□□ -1.48
VIM-202ENST00000421459 CLN5O75503 358 aa5.81□□□□□ -1.48
VIM-202ENST00000421459 CD5P06127 495 aa5.81□□□□□ -1.48
VIM-202ENST00000421459 P0C879 139 aa5.81□□□□□ -1.48
VIM-202ENST00000421459 SPP1P10451 314 aa5.81□□□□□ -1.48
VIM-202ENST00000421459 PGAM2P15259 253 aa5.81□□□□□ -1.48
VIM-202ENST00000421459 EMP1P54849 157 aa5.81□□□□□ -1.48
VIM-202ENST00000421459 FXYD7P58549 80 aa5.81□□□□□ -1.48
VIM-202ENST00000421459 LPCAT3Q6P1A2 487 aa5.81□□□□□ -1.48
VIM-202ENST00000421459 MORN3Q6PF18 240 aaPredicted RBP5.81□□□□□ -1.48
VIM-202ENST00000421459 Q6ZRM9 215 aa5.81□□□□□ -1.48
VIM-202ENST00000421459 ZNF575Q86XF7 245 aa5.81□□□□□ -1.48
VIM-202ENST00000421459 POM121L12Q8N7R1 296 aa5.81□□□□□ -1.48
VIM-202ENST00000421459 AP3S1Q92572 193 aa5.81□□□□□ -1.48
VIM-202ENST00000421459 METTL26Q96S19 204 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms