RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 IL3RAP26951 378 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 RPL29P47914 159 aaKnown RBP8.84□□□□□ -0.99
DDX56-203ENST00000421223 FBXL15Q9H469 300 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 NDUFA4L2Q9NRX3 87 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 TNFRSF13BO14836 293 aaPredicted RBP8.84□□□□□ -0.99
DDX56-203ENST00000421223 MOSP00540 346 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 ORM2P19652 201 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 S100A2P29034 98 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 SUMO1P63165 101 aaKnown RBP8.84□□□□□ -0.99
DDX56-203ENST00000421223 CD69Q07108 199 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 TMEM30BQ3MIR4 351 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 TMEM177Q53S58 311 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 PYY3Q5JQD4 70 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 ASPHD1Q5U4P2 390 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 PDPNQ86YL7 162 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 C11orf42Q8N5U0 333 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 VSTM2AQ8TAG5 236 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 CTDSP1Q9GZU7 261 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 GSX1Q9H4S2 264 aaPredicted RBP8.84□□□□□ -0.99
DDX56-203ENST00000421223 SLC45A2Q9UMX9 530 aa8.84□□□□□ -0.99
DDX56-203ENST00000421223 TRBV20OR9-2A0A075B6H5 130 aa8.83□□□□□ -1
DDX56-203ENST00000421223 TRBV24-1A0A075B6N3 115 aa8.83□□□□□ -1
DDX56-203ENST00000421223 SPINK4O60575 86 aa8.83□□□□□ -1
DDX56-203ENST00000421223 NDUFS7O75251 213 aa8.83□□□□□ -1
DDX56-203ENST00000421223 PRB4P10163 310 aaPredicted RBP8.83□□□□□ -1
DDX56-203ENST00000421223 AREGP15514 252 aa8.83□□□□□ -1
DDX56-203ENST00000421223 CRYBB3P26998 211 aa8.83□□□□□ -1
DDX56-203ENST00000421223 CDKN1AP38936 164 aa8.83□□□□□ -1
DDX56-203ENST00000421223 PRRX1P54821 245 aa8.83□□□□□ -1
DDX56-203ENST00000421223 SSX8Q7RTT4 187 aa8.83□□□□□ -1
DDX56-203ENST00000421223 LINC01551Q86U37 167 aa8.83□□□□□ -1
DDX56-203ENST00000421223 FNDC4Q9H6D8 234 aaPredicted RBP8.83□□□□□ -1
DDX56-203ENST00000421223 GAR1Q9NY12 217 aaKnown RBP8.83□□□□□ -1
DDX56-203ENST00000421223 MDFIC2A0A1B0GVS7 189 aa8.83□□□□□ -1
DDX56-203ENST00000421223 A0A1W2PPI3 338 aa8.83□□□□□ -1
DDX56-203ENST00000421223 ZNF320A2RRD8 509 aa8.83□□□□□ -1
DDX56-203ENST00000421223 DLL1O00548 723 aa8.83□□□□□ -1
DDX56-203ENST00000421223 PPP1R2P9O14990 202 aa8.83□□□□□ -1
DDX56-203ENST00000421223 SOD3P08294 240 aa8.83□□□□□ -1
DDX56-203ENST00000421223 DLX6P56179 175 aa8.83□□□□□ -1
DDX56-203ENST00000421223 KLRD1Q13241 179 aa8.83□□□□□ -1
DDX56-203ENST00000421223 OR5I1Q13606 314 aa8.83□□□□□ -1
DDX56-203ENST00000421223 HES1Q14469 280 aa8.83□□□□□ -1
DDX56-203ENST00000421223 C2orf83Q53S99 150 aa8.83□□□□□ -1
DDX56-203ENST00000421223 MORN5Q5VZ52 161 aa8.83□□□□□ -1
DDX56-203ENST00000421223 HIST3H2BBQ8N257 126 aa8.83□□□□□ -1
DDX56-203ENST00000421223 OR8B3Q8NGG8 313 aa8.83□□□□□ -1
DDX56-203ENST00000421223 OR10D4PQ8NGN7 298 aa8.83□□□□□ -1
DDX56-203ENST00000421223 OR2T10Q8NGZ9 312 aa8.83□□□□□ -1
DDX56-203ENST00000421223 OCC1Q8TAD7 63 aa8.83□□□□□ -1
DDX56-203ENST00000421223 ST6GALNAC6Q969X2 333 aa8.83□□□□□ -1
DDX56-203ENST00000421223 OR8B2Q96RD0 313 aa8.83□□□□□ -1
DDX56-203ENST00000421223 RAB1BQ9H0U4 201 aa8.83□□□□□ -1
DDX56-203ENST00000421223 MRPL36Q9P0J6 103 aaKnown RBP8.83□□□□□ -1
DDX56-203ENST00000421223 HRNRQ86YZ3 2850 aaPredicted RBP8.83□□□□□ -1
DDX56-203ENST00000421223 CACNA1AO00555 2505 aa8.83□□□□□ -1
DDX56-203ENST00000421223 H3BTX0 84 aa8.83□□□□□ -1
DDX56-203ENST00000421223 SLC17A3O00476 420 aa8.83□□□□□ -1
DDX56-203ENST00000421223 CNIH1O95406 144 aa8.83□□□□□ -1
DDX56-203ENST00000421223 FABP4P15090 132 aa8.83□□□□□ -1
DDX56-203ENST00000421223 PRR20EP86478 221 aa8.83□□□□□ -1
DDX56-203ENST00000421223 PRR20CP86479 221 aa8.83□□□□□ -1
DDX56-203ENST00000421223 PRR20DP86480 221 aa8.83□□□□□ -1
DDX56-203ENST00000421223 PRR20BP86481 221 aa8.83□□□□□ -1
DDX56-203ENST00000421223 PRR20AP86496 221 aa8.83□□□□□ -1
DDX56-203ENST00000421223 S100A7AQ86SG5 101 aa8.83□□□□□ -1
DDX56-203ENST00000421223 ST6GALNAC3Q8NDV1 305 aa8.83□□□□□ -1
DDX56-203ENST00000421223 RAB1CQ92928 201 aa8.83□□□□□ -1
DDX56-203ENST00000421223 CLEC7AQ9BXN2 247 aa8.83□□□□□ -1
DDX56-203ENST00000421223 KAAG1Q9UBP8 84 aa8.83□□□□□ -1
DDX56-203ENST00000421223 FUT9Q9Y231 359 aa8.83□□□□□ -1
DDX56-203ENST00000421223 ELOA3CA0A087WX78 387 aaPredicted RBP8.82□□□□□ -1
DDX56-203ENST00000421223 COX7A2P2O60397 106 aa8.82□□□□□ -1
DDX56-203ENST00000421223 PFN1P07737 140 aaKnown RBP8.82□□□□□ -1
DDX56-203ENST00000421223 MC5RP33032 325 aa8.82□□□□□ -1
DDX56-203ENST00000421223 SUB1P53999 127 aaKnown RBP eCLIP8.82□□□□□ -1
DDX56-203ENST00000421223 PRSS8Q16651 343 aa8.82□□□□□ -1
DDX56-203ENST00000421223 NHLRC2Q8NBF2 726 aa8.82□□□□□ -1
DDX56-203ENST00000421223 OR4X1Q8NH49 305 aa8.82□□□□□ -1
DDX56-203ENST00000421223 SGMS2Q8NHU3 365 aa8.82□□□□□ -1
DDX56-203ENST00000421223 TMEM167AQ8TBQ9 72 aa8.82□□□□□ -1
DDX56-203ENST00000421223 SGK494Q96LW2 274 aa8.82□□□□□ -1
DDX56-203ENST00000421223 PKD1L2Q7Z442 2459 aa8.82□□□□□ -1
DDX56-203ENST00000421223 A0A1W2PN81 502 aa8.82□□□□□ -1
DDX56-203ENST00000421223 CGB1A6NKQ9 187 aa8.82□□□□□ -1
DDX56-203ENST00000421223 TGOLN2O43493 480 aa8.82□□□□□ -1
DDX56-203ENST00000421223 IGLV2-23P01705 113 aa8.82□□□□□ -1
DDX56-203ENST00000421223 PYYP10082 97 aa8.82□□□□□ -1
DDX56-203ENST00000421223 UNQ6494/PRO21346Q6UXR6 183 aa8.82□□□□□ -1
DDX56-203ENST00000421223 TECRQ9NZ01 308 aaKnown RBP8.82□□□□□ -1
DDX56-203ENST00000421223 S4R3C0 116 aa8.82□□□□□ -1
DDX56-203ENST00000421223 IGHV1-3A0A0C4DH29 117 aa8.81□□□□□ -1
DDX56-203ENST00000421223 C22orf46C9J442 243 aa8.81□□□□□ -1
DDX56-203ENST00000421223 FCN1O00602 326 aa8.81□□□□□ -1
DDX56-203ENST00000421223 MGST1P10620 155 aaKnown RBP8.81□□□□□ -1
DDX56-203ENST00000421223 S100A7P31151 101 aa8.81□□□□□ -1
DDX56-203ENST00000421223 RPL27AP46776 148 aaKnown RBP8.81□□□□□ -1
DDX56-203ENST00000421223 HLA-DRB5Q30154 266 aa8.81□□□□□ -1
DDX56-203ENST00000421223 RUSC1-AS1Q66K80 236 aa8.81□□□□□ -1
DDX56-203ENST00000421223 OR5AU1Q8NGC0 362 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms