RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ZNF675Q8TD23 568 aa1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 SMCR5Q8TEV8 140 aa1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 HIST1H2BHQ93079 126 aa1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 SERPINI1Q99574 410 aa1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 HIST1H2BNQ99877 126 aa1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 HIST1H2BMQ99879 126 aa1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 CHST6Q9GZX3 395 aa1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 TVP23BQ9NYZ1 205 aa1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 MCTS1Q9ULC4 181 aaKnown RBP1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 HEY1Q9Y5J3 304 aa1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 PZPP20742 1482 aa1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 EPRSP07814 1512 aaKnown RBP1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 MAGI3Q5TCQ9 1506 aa1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 ABCA10Q8WWZ4 1543 aa1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 ABCC2Q92887 1545 aa1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 KDM5DQ9BY66 1539 aa1.61□□□□□ -2.15
HMGB1P49-201ENST00000418882 ARHGEF10O15013 1369 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 IBTKQ9P2D0 1353 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 MYO5CQ9NQX4 1742 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 NCOA3Q9Y6Q9 1424 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 NESP48681 1621 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 A0A087WX48 190 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 GGT3PA6NGU5 568 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 ZNF860A6NHJ4 632 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 E7EQL1 145 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 NDUFC2O95298 119 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 IGKV1-16P04430 117 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 DEFA4P12838 97 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 IFI30P13284 250 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 PSMB8P28062 276 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 S100GP29377 79 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 EVX1P49640 407 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 INSL3P51460 131 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 CDC42P60953 191 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 LGALSLQ3ZCW2 172 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 ZNF439Q8NDP4 499 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 WFDC5Q8TCV5 224 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 ACOT12Q8WYK0 555 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 C11orf40Q8WZ69 217 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 PLEKHB2Q96CS7 222 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 ADAT3Q96EY9 351 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 GPER1Q99527 375 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 EFCAB11Q9BUY7 163 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 TMEM133Q9H2Q1 129 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 DUSP21Q9H596 190 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 MINOS1-NBL1R4GNA1 71 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 COL11A1P12107 1806 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 ADGRL2O95490 1459 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 CAMSAP2Q08AD1 1489 aa1.6□□□□□ -2.15
HMGB1P49-201ENST00000418882 EIF4G3O43432 1585 aaKnown RBP1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 DNMBPQ6XZF7 1577 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 REREQ9P2R6 1566 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 OTOFQ9HC10 1997 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 ADCY10Q96PN6 1610 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 RNF17Q9BXT8 1623 aaKnown RBP1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 RTEL1-TNFRSF6BF6WH68 1400 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 PTPRGP23470 1445 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 KIAA1107Q9UPP5 1409 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 RALGAPA2Q2PPJ7 1873 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 IQGAP1P46940 1657 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 ABCC10Q5T3U5 1492 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 IGKV1-9A0A0C4DH69 117 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 A0A1B0GW54 56 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 H7BYZ3 331 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 M0R378 163 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 CPSF4O95639 269 aaKnown RBP1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 PPBPP02775 128 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 HMGN1P05114 100 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 ZNF728P0DKX0 622 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 RPS4Y1P22090 263 aaKnown RBP1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 RPS3P23396 243 aaKnown RBP eCLIP1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 BLVRBP30043 206 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 FUSP35637 526 aaKnown RBP eCLIP1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 XCL1P47992 114 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 TAS2R20P59543 309 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 KRTAP12-1P59990 96 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 PSPHP78330 225 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 ZNF117Q03924 483 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 RPL18Q07020 188 aaKnown RBP1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 BIKQ13323 160 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 ZNF141Q15928 474 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 ZNF767PQ75MW2 155 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 KTN1-AS1Q86SY8 53 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 Q8NDZ9 215 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 OR5J2Q8NH18 312 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 TERB2Q8NHR7 220 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 DYDC1Q8WWB3 177 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 MAFIPQ8WZ33 124 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 SLAMF6Q96DU3 332 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 CCDC115Q96NT0 180 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 OR8B2Q96RD0 313 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 PBDC1Q9BVG4 233 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 KRTAP4-1Q9BYQ7 146 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 OR52A1Q9UKL2 312 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 PCTPQ9UKL6 214 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 ASB4Q9Y574 426 aa1.59□□□□□ -2.15
HMGB1P49-201ENST00000418882 CDC42BPAQ5VT25 1732 aa1.59□□□□□ -2.16
HMGB1P49-201ENST00000418882 SHANK3Q9BYB0 1731 aa1.59□□□□□ -2.16
HMGB1P49-201ENST00000418882 PRDM15P57071 1507 aaPredicted RBP1.59□□□□□ -2.16
HMGB1P49-201ENST00000418882 DOCK5Q9H7D0 1870 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms