RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 PIGYQ3MUY2 71 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 OR10J3Q5JRS4 329 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 TMEM31Q5JXX7 168 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 SPATA46Q5T0L3 261 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 LCE3CQ5T5A8 94 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 TPTE2P1Q5T6R2 138 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 FAM162BQ5T6X4 162 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 CARD17Q5XLA6 110 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 FBXW9Q5XUX1 488 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 ETFRF1Q6IPR1 90 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 WDR74Q6RFH5 385 aaPredicted RBP2.02□□□□□ -2.09
VPS41-206ENST00000418457 C19orf35Q6ZS72 473 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 SSX7Q7RTT5 188 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 LINC01551Q86U37 167 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 RPS19BP1Q86WX3 136 aaKnown RBP2.02□□□□□ -2.09
VPS41-206ENST00000418457 WDFY1Q8IWB7 410 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 Q8IYB0 196 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 PNKDQ8N490 385 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 SPEM1Q8N4L4 309 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 DEFB123Q8N688 67 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 ZNF491Q8N8L2 437 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 OR5AU1Q8NGC0 362 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 OR10P1Q8NGE3 313 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 OR5A2Q8NGI9 324 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 OR10G9Q8NGN4 311 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 OR2AE1Q8NHA4 323 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 NEK7Q8TDX7 302 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 LMX1AQ8TE12 382 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 ORAOV1Q8WV07 137 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 TMEM37Q8WXS4 190 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 C22orf15Q8WYQ4 148 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 PSMF1Q92530 271 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 CLDN23Q96B33 292 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 GPR146Q96CH1 333 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 RPUSD4Q96CM3 377 aaKnown RBP2.02□□□□□ -2.09
VPS41-206ENST00000418457 SDSLQ96GA7 329 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 SFRP2Q96HF1 295 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 SLC35E1Q96K37 410 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 OR4F4Q96R69 305 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 TBX15Q96SF7 602 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 RNF2Q99496 336 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 RSG1Q9BU20 258 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 OR2J1Q9GZK6 312 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 OPN3Q9H1Y3 402 aaPredicted RBP2.02□□□□□ -2.09
VPS41-206ENST00000418457 ZDHHC11Q9H8X9 412 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 LPAR2Q9HBW0 351 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 TMEM38BQ9NVV0 291 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 ZNF586Q9NXT0 402 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 KCNIP1Q9NZI2 227 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 DHRS4-AS1Q9P1J3 65 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 UQCR10Q9UDW1 63 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 RNF24Q9Y225 148 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 TRIOBPQ9H2D6 2365 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 RP1P56715 2156 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 MYO7BQ6PIF6 2116 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 NCOA6Q14686 2063 aaPredicted RBP2.02□□□□□ -2.09
VPS41-206ENST00000418457 ALPK2Q86TB3 2170 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 TRAV9-2A0A087WT02 112 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 IGHV1OR21-1A0A087WYE8 117 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 IGKV1D-13A0A0B4J2D9 117 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 UBE2L5PA0A1B0GUS4 154 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 A0A1B0GVY2 172 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 A0A1W2PPV4 95 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 C17orf51A8MQB3 221 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 H3BP45 60 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 SIRPB1O00241 398 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 CDIPTO14735 213 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 RAB29O14966 203 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 YPEL1O60688 119 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 ZNF253O75346 499 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 CXorf1O96002 111 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 IGHG3P01860 377 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 MMP7P09237 267 aaPredicted RBP2.01□□□□□ -2.09
VPS41-206ENST00000418457 SCTP09683 121 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 OR10J4P0C629 311 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 IGKV1-13P0DP09 117 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 IAPPP10997 89 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 PSG2P11465 335 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 ZNF32P17041 273 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 KITLGP21583 273 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 MDKP21741 143 aaPredicted RBP2.01□□□□□ -2.09
VPS41-206ENST00000418457 CDKN1BP46527 198 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 RAB7AP51149 207 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 HNRNPA3P51991 378 aaKnown RBP2.01□□□□□ -2.09
VPS41-206ENST00000418457 MFAP2P55001 183 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 FGF8P55075 233 aaPredicted RBP2.01□□□□□ -2.09
VPS41-206ENST00000418457 UBE2G2P60604 165 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 RHOBP62745 196 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 TGFBR3Q03167 851 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 ZNF90Q03938 601 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 OR5I1Q13606 314 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 RAB31Q13636 194 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 IGFBP7Q16270 282 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 RTL8BQ17RB0 113 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 RPEL1Q2QD12 228 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 MORN2Q502X0 79 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 SPANXN5Q5MJ07 72 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 LINC00242Q5T6M2 205 aa2.01□□□□□ -2.09
VPS41-206ENST00000418457 FAM78BQ5VT40 261 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms