RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 MRPL14Q6P1L8 145 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 Q6ZS52 159 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 TMEM140Q9NV12 185 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 IGKV3D-15A0A087WSY6 115 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 IGHV1-45A0A0A0MS14 117 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 PSMB11A5LHX3 300 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 SNAI2O43623 268 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 C8orf88P0DMB2 117 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 NXPH1P58417 271 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 PLP2Q04941 152 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 KIR3DS1Q14943 382 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 DPF1Q92782 380 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 IMMP1LQ96LU5 166 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 SLC25A33Q9BSK2 321 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 AKIRIN1Q9H9L7 192 aaPredicted RBP6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 DEFB108AA8MXU0 73 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 H0Y8G0 127 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 F2RL2O00254 374 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 GPR12P47775 334 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 PRR31Q5SQ13 230 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 TPRX1Q8N7U7 411 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 OCIAD1Q9NX40 245 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 LOXL2Q9Y4K0 774 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 SMG1Q96Q15 3661 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 IGKV1OR2-108A0A075B7D4 117 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 A0A1W2PPM0 123 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 C15orf61A6NNL5 157 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 J3QW42 95 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 CD24P25063 80 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 ZNF766Q5HY98 468 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 SIGMAR1Q99720 223 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 NAA38Q9BRA0 125 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 NDFIP1Q9BT67 221 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 RABAC1Q9UI14 185 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 PILRBQ9UKJ0 227 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 SOX21Q9Y651 276 aaPredicted RBP6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 SPCS1Q9Y6A9 102 aa6.55□□□□□ -1.36
HMGXB4-202ENST00000418170 C2CD4DB7Z1M9 353 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 MT-CO3P00414 261 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 RFPL3SP0C7P2 107 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 Q5PR19 223 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 TMEM108Q6UXF1 575 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 WFDC12Q8WWY7 111 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 ATP6V0BQ99437 205 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 GTSF1LQ9H1H1 148 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 R4GN57 208 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 TMEM189A5PLL7 270 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 PEX7O00628 323 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 UBE2L3P68036 154 aaKnown RBP6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 WDR82Q6UXN9 313 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 FAM167A-AS1Q96KT0 104 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 FAM87AP0C7U9 286 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 COX6A1P12074 109 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 HSD52Q0P140 79 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 SMAGPQ0VAQ4 97 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 TEX45Q8NA69 505 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 OR13A1Q8NGR1 328 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 RFESDQ8TAC1 157 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 MRPL32Q9BYC8 188 aaKnown RBP6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 FAM234AQ9H0X4 552 aa6.54□□□□□ -1.36
HMGXB4-202ENST00000418170 TEX48A0A1B0GUV7 120 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 CER1O95813 267 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 HSPE1P61604 102 aaKnown RBP6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 SLC25A45Q8N413 288 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 SLC25A2Q9BXI2 301 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 TMEM14BQ9NUH8 114 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 FOXA2Q9Y261 457 aaPredicted RBP6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 IGHV3-64DA0A0J9YX35 117 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 ADH4P08319 380 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 ZNF329Q86UD4 541 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 PERPQ96FX8 193 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 ENY2Q9NPA8 101 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 HILPDAQ9Y5L2 63 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 ZNF138P52744 262 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 MEF2CQ06413 473 aaPredicted RBP6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 GUSBP1Q15486 140 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 BHLHA15Q7RTS1 189 aaPredicted RBP6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 BOD1L2Q8IYS8 172 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 ZNF747Q9BV97 191 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 DOCK7Q96N67 2140 aa6.53□□□□□ -1.36
HMGXB4-202ENST00000418170 C15orf65H3BRN8 121 aa6.52□□□□□ -1.36
HMGXB4-202ENST00000418170 AGFG2O95081 481 aa6.52□□□□□ -1.36
HMGXB4-202ENST00000418170 RPL24P83731 157 aaKnown RBP6.52□□□□□ -1.36
HMGXB4-202ENST00000418170 CT83Q5H943 113 aa6.52□□□□□ -1.36
HMGXB4-202ENST00000418170 MORN5Q5VZ52 161 aa6.52□□□□□ -1.36
HMGXB4-202ENST00000418170 MOB3BQ86TA1 216 aa6.52□□□□□ -1.36
HMGXB4-202ENST00000418170 GTSF1Q8WW33 167 aa6.52□□□□□ -1.36
HMGXB4-202ENST00000418170 NEU4Q8WWR8 484 aaPredicted RBP6.52□□□□□ -1.36
HMGXB4-202ENST00000418170 S1PR3Q99500 378 aa6.52□□□□□ -1.36
HMGXB4-202ENST00000418170 TMUB1Q9BVT8 246 aa6.52□□□□□ -1.36
HMGXB4-202ENST00000418170 RPP21Q9H633 154 aaKnown RBP6.52□□□□□ -1.36
HMGXB4-202ENST00000418170 THYN1Q9P016 225 aa6.52□□□□□ -1.36
HMGXB4-202ENST00000418170 ZNF257Q9Y2Q1 563 aa6.52□□□□□ -1.36
HMGXB4-202ENST00000418170 A8MWL6 223 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 SPINT2O43291 252 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 GRPP07492 148 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 FABP6P51161 128 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 ADAMTSL5Q6ZMM2 481 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 TUSC5Q8IXB3 177 aa6.52□□□□□ -1.37
HMGXB4-202ENST00000418170 OR9G4Q8NGQ1 327 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms