RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 COMMD5Q9GZQ3 224 aa10.45□□□□□ -0.74
LRRTM1-205ENST00000417012 MUC6Q6W4X9 2439 aa10.45□□□□□ -0.74
LRRTM1-205ENST00000417012 HYPMO75409 117 aa10.45□□□□□ -0.74
LRRTM1-205ENST00000417012 CGB3P0DN86 165 aa10.45□□□□□ -0.74
LRRTM1-205ENST00000417012 CGB7P0DN87 165 aa10.45□□□□□ -0.74
LRRTM1-205ENST00000417012 NIT1Q86X76 327 aa10.45□□□□□ -0.74
LRRTM1-205ENST00000417012 FAM19A2Q8N3H0 131 aa10.45□□□□□ -0.74
LRRTM1-205ENST00000417012 TSKUQ8WUA8 353 aa10.45□□□□□ -0.74
LRRTM1-205ENST00000417012 M0R1B8 84 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 UPK2O00526 184 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 SIAH2O43255 324 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 CEACAM4O75871 244 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 UBE2L3P68036 154 aaKnown RBP10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 ZNF439Q8NDP4 499 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 MRPL32Q9BYC8 188 aaKnown RBP10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 CA1P00915 261 aaPredicted RBP10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 ATP5IP56385 69 aaPredicted RBP10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 C2orf83Q53S99 150 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 ZNF474Q6S9Z5 364 aaPredicted RBP10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 NHLRC2Q8NBF2 726 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 OR9G1Q8NH87 305 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 SLC25A33Q9BSK2 321 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 WNT10AQ9GZT5 417 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 MRPL27Q9P0M9 148 aaKnown RBP10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 RPH3ALQ9UNE2 315 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 LAMTOR2Q9Y2Q5 125 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 ROS1P08922 2347 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 NCOR1P1Q9H4R4 102 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 DNAJC4Q9NNZ3 241 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 FAM215AQ9Y5M1 114 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 SLC25A15Q9Y619 301 aa10.44□□□□□ -0.74
LRRTM1-205ENST00000417012 ZGRF1Q86YA3 2104 aa10.43□□□□□ -0.74
LRRTM1-205ENST00000417012 STUMQ69YW2 141 aa10.43□□□□□ -0.74
LRRTM1-205ENST00000417012 RASL11AQ6T310 242 aa10.43□□□□□ -0.74
LRRTM1-205ENST00000417012 RNASE8Q8TDE3 154 aaKnown RBP10.43□□□□□ -0.74
LRRTM1-205ENST00000417012 RELNP78509 3460 aa10.43□□□□□ -0.74
LRRTM1-205ENST00000417012 SLAQ13239 276 aa10.43□□□□□ -0.74
LRRTM1-205ENST00000417012 C18orf32Q8TCD1 76 aa10.43□□□□□ -0.74
LRRTM1-205ENST00000417012 SSBP3Q9BWW4 388 aaPredicted RBP10.43□□□□□ -0.74
LRRTM1-205ENST00000417012 MBD3L4A6NDZ8 208 aaPredicted RBP10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 MBD3L3A6NE82 208 aaPredicted RBP10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 MBD3L5A6NJ08 208 aaPredicted RBP10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 KLK10O43240 276 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 SPRY3O43610 288 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 HSBP1O75506 76 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 SELENOVP59797 346 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 CD69Q07108 199 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 PMCHL1Q16048 86 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 C22orf34Q6ZV56 151 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 STPG4Q8N801 248 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 OR1L8Q8NGR8 309 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 OR5B3Q8NH48 314 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 MBD3L2Q8NHZ7 208 aaPredicted RBP10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 TRAV34A0A0B4J273 112 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 TEX50A0A1B0GTY4 177 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 IGKV1-16P04430 117 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 RNASE2P10153 161 aaKnown RBP10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 MFAP2P55001 183 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 FAM201AQ5SY85 155 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 WIPF2Q8TF74 440 aaPredicted RBP10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 ITLN1Q8WWA0 313 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 PPIAL4AQ9Y536 164 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 APC2O95996 2303 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 MLANAQ16655 118 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 Q5PR19 223 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 ATOH7Q8N100 152 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 SLC25A2Q9BXI2 301 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 ZNF355PQ9NSJ1 428 aa10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 AMMECR1Q9Y4X0 333 aaPredicted RBP10.42□□□□□ -0.74
LRRTM1-205ENST00000417012 DSCAMO60469 2012 aa10.41□□□□□ -0.74
LRRTM1-205ENST00000417012 LHBP01229 141 aa10.41□□□□□ -0.74
LRRTM1-205ENST00000417012 KLF3P57682 345 aaPredicted RBP10.41□□□□□ -0.74
LRRTM1-205ENST00000417012 IGF2-ASQ6U949 168 aa10.41□□□□□ -0.74
LRRTM1-205ENST00000417012 PRSS33Q8NF86 280 aa10.41□□□□□ -0.74
LRRTM1-205ENST00000417012 FAM168AQ92567 244 aa10.41□□□□□ -0.74
LRRTM1-205ENST00000417012 SAP30LQ9HAJ7 183 aa10.41□□□□□ -0.74
LRRTM1-205ENST00000417012 YLPM1P49750 1951 aaKnown RBP10.41□□□□□ -0.74
LRRTM1-205ENST00000417012 TNCP24821 2201 aa10.41□□□□□ -0.74
LRRTM1-205ENST00000417012 TRAV5A0A0B4J249 113 aa10.41□□□□□ -0.74
LRRTM1-205ENST00000417012 SAA1P0DJI8 122 aaPredicted RBP10.41□□□□□ -0.74
LRRTM1-205ENST00000417012 RBMXL3Q8N7X1 1067 aaKnown RBP10.41□□□□□ -0.74
LRRTM1-205ENST00000417012 FAM167A-AS1Q96KT0 104 aa10.41□□□□□ -0.74
LRRTM1-205ENST00000417012 LINC00479Q96M42 142 aa10.41□□□□□ -0.74
LRRTM1-205ENST00000417012 BET1LQ9NYM9 111 aa10.41□□□□□ -0.74
LRRTM1-205ENST00000417012 SRRM4A7MD48 611 aaKnown RBP10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 DLL1O00548 723 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 COX7A2P2O60397 106 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 CT45A6P0DMU7 189 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 CT45A5P0DMU8 189 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 CT45A7P0DMV0 189 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 MORN5Q5VZ52 161 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 DUX4L9Q6RFH8 374 aaPredicted RBP10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 FAM231DQ6ZW35 169 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 SPACA3Q8IXA5 215 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 CACNG8Q8WXS5 425 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 ZNF714Q96N38 554 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 CLEC7AQ9BXN2 247 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 C20orf202A1L168 122 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 M0R2Z0 102 aa10.4□□□□□ -0.74
LRRTM1-205ENST00000417012 LCN12Q6JVE5 192 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms