RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 RP1L1Q8IWN7 2480 aaPredicted RBP16.84■□□□□ 0.29
AP1S3-205ENST00000415298 FOXI3A8MTJ6 420 aaPredicted RBP16.84■□□□□ 0.29
AP1S3-205ENST00000415298 NHLRC4P0CG21 123 aaPredicted RBP16.84■□□□□ 0.29
AP1S3-205ENST00000415298 PRTN3P24158 256 aa16.84■□□□□ 0.29
AP1S3-205ENST00000415298 BLVRBP30043 206 aaPredicted RBP16.84■□□□□ 0.29
AP1S3-205ENST00000415298 VDAC2P45880 294 aaPredicted RBP16.84■□□□□ 0.29
AP1S3-205ENST00000415298 NRGNQ92686 78 aa16.84■□□□□ 0.29
AP1S3-205ENST00000415298 C20orf78Q9BR46 151 aa16.84■□□□□ 0.29
AP1S3-205ENST00000415298 TMEM222Q9H0R3 208 aa16.84■□□□□ 0.29
AP1S3-205ENST00000415298 MED29Q9NX70 200 aa16.84■□□□□ 0.29
AP1S3-205ENST00000415298 ERRFI1Q9UJM3 462 aaPredicted RBP16.84■□□□□ 0.29
AP1S3-205ENST00000415298 C3orf85A0A1B0GTC6 90 aa16.83■□□□□ 0.28
AP1S3-205ENST00000415298 CX3CL1P78423 397 aa16.83■□□□□ 0.28
AP1S3-205ENST00000415298 FOXE3Q13461 319 aa16.83■□□□□ 0.28
AP1S3-205ENST00000415298 TIGITQ495A1 244 aa16.83■□□□□ 0.28
AP1S3-205ENST00000415298 SH2D6Q7Z4S9 175 aa16.83■□□□□ 0.28
AP1S3-205ENST00000415298 OCC1Q8TAD7 63 aa16.83■□□□□ 0.28
AP1S3-205ENST00000415298 SNRNP40Q96DI7 357 aaKnown RBP16.83■□□□□ 0.28
AP1S3-205ENST00000415298 TIMM9Q9Y5J7 89 aa16.83■□□□□ 0.28
AP1S3-205ENST00000415298 TRBV20OR9-2A0A075B6H5 130 aa16.83■□□□□ 0.28
AP1S3-205ENST00000415298 OR3A4PP47883 348 aa16.83■□□□□ 0.28
AP1S3-205ENST00000415298 TCL1AP56279 114 aa16.83■□□□□ 0.28
AP1S3-205ENST00000415298 RNF144BQ7Z419 303 aa16.83■□□□□ 0.28
AP1S3-205ENST00000415298 EMC6Q9BV81 110 aa16.83■□□□□ 0.28
AP1S3-205ENST00000415298 SPANXA1Q9NS26 97 aa16.83■□□□□ 0.28
AP1S3-205ENST00000415298 KCNIP2Q9NS61 270 aa16.83■□□□□ 0.28
AP1S3-205ENST00000415298 ZGRF1Q86YA3 2104 aa16.82■□□□□ 0.28
AP1S3-205ENST00000415298 EPG5Q9HCE0 2579 aa16.82■□□□□ 0.28
AP1S3-205ENST00000415298 FOXH1O75593 365 aa16.82■□□□□ 0.28
AP1S3-205ENST00000415298 SPACA5Q96QH8 159 aa16.82■□□□□ 0.28
AP1S3-205ENST00000415298 SRSF8Q9BRL6 282 aaKnown RBP16.82■□□□□ 0.28
AP1S3-205ENST00000415298 H3BP45 60 aa16.81■□□□□ 0.28
AP1S3-205ENST00000415298 KIR2DS4P43632 304 aa16.81■□□□□ 0.28
AP1S3-205ENST00000415298 CEACAM16Q2WEN9 425 aa16.81■□□□□ 0.28
AP1S3-205ENST00000415298 OR52N5Q8NH56 324 aa16.81■□□□□ 0.28
AP1S3-205ENST00000415298 LRRC30A6NM36 301 aa16.81■□□□□ 0.28
AP1S3-205ENST00000415298 CRYAAP02489 173 aa16.81■□□□□ 0.28
AP1S3-205ENST00000415298 APCSP02743 223 aa16.81■□□□□ 0.28
AP1S3-205ENST00000415298 OR4A16Q8NH70 328 aa16.81■□□□□ 0.28
AP1S3-205ENST00000415298 OR2W1Q9Y3N9 320 aa16.81■□□□□ 0.28
AP1S3-205ENST00000415298 COL6A6A6NMZ7 2263 aa16.81■□□□□ 0.28
AP1S3-205ENST00000415298 SCGB2A1O75556 95 aa16.8■□□□□ 0.28
AP1S3-205ENST00000415298 IGHG4P01861 327 aa16.8■□□□□ 0.28
AP1S3-205ENST00000415298 AMY1AP04745 511 aa16.8■□□□□ 0.28
AP1S3-205ENST00000415298 ZFAND6Q6FIF0 208 aa16.8■□□□□ 0.28
AP1S3-205ENST00000415298 ACP7Q6ZNF0 438 aa16.8■□□□□ 0.28
AP1S3-205ENST00000415298 SYT8Q8NBV8 401 aa16.8■□□□□ 0.28
AP1S3-205ENST00000415298 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.8■□□□□ 0.28
AP1S3-205ENST00000415298 TAF15Q92804 592 aaKnown RBP eCLIP16.8■□□□□ 0.28
AP1S3-205ENST00000415298 XGP55808 180 aa16.8■□□□□ 0.28
AP1S3-205ENST00000415298 TRGV10A0A0A0MS01 117 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 F5H5K5 113 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 RER1O15258 196 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 NXPH3O95157 252 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 FCGR2BP31994 310 aaPredicted RBP16.79■□□□□ 0.28
AP1S3-205ENST00000415298 NTF4P34130 210 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 PSG7Q13046 419 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 ARPC1AQ92747 370 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 RAB40CQ96S21 281 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 NBASA2RRP1 2371 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 IGHV3-7P01780 117 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 THBDP07204 575 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 INSL3P51460 131 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 HBG1P69891 147 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 HBG2P69892 147 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 NMSQ5H8A3 153 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 TNFRSF19Q9NS68 423 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 KCNS2Q9ULS6 477 aa16.79■□□□□ 0.28
AP1S3-205ENST00000415298 A0A1W2PRD5 423 aa16.78■□□□□ 0.28
AP1S3-205ENST00000415298 A0A1W2PRF3 423 aa16.78■□□□□ 0.28
AP1S3-205ENST00000415298 A0A1W2PRM7 423 aa16.78■□□□□ 0.28
AP1S3-205ENST00000415298 ZNF146Q15072 292 aa16.78■□□□□ 0.28
AP1S3-205ENST00000415298 PDLIM3Q53GG5 364 aaPredicted RBP16.78■□□□□ 0.28
AP1S3-205ENST00000415298 RNASEKQ6P5S7 137 aaKnown RBP16.78■□□□□ 0.28
AP1S3-205ENST00000415298 OR10G9Q8NGN4 311 aa16.78■□□□□ 0.28
AP1S3-205ENST00000415298 OR10G7Q8NGN6 311 aa16.78■□□□□ 0.28
AP1S3-205ENST00000415298 OSR1Q8TAX0 266 aaPredicted RBP16.78■□□□□ 0.28
AP1S3-205ENST00000415298 CT45A10P0DMU9 189 aa16.78■□□□□ 0.28
AP1S3-205ENST00000415298 KLF5Q13887 457 aaPredicted RBP16.78■□□□□ 0.28
AP1S3-205ENST00000415298 OXGR1Q96P68 337 aa16.78■□□□□ 0.28
AP1S3-205ENST00000415298 TXNIPQ9H3M7 391 aa16.78■□□□□ 0.28
AP1S3-205ENST00000415298 FAM90A27PA6NNH2 459 aa16.77■□□□□ 0.28
AP1S3-205ENST00000415298 ATP5G3P48201 142 aa16.77■□□□□ 0.28
AP1S3-205ENST00000415298 Q6AWC8 147 aa16.77■□□□□ 0.28
AP1S3-205ENST00000415298 PRDM14Q9GZV8 571 aa16.77■□□□□ 0.28
AP1S3-205ENST00000415298 RABAC1Q9UI14 185 aa16.77■□□□□ 0.28
AP1S3-205ENST00000415298 IGSF10Q6WRI0 2623 aa16.77■□□□□ 0.28
AP1S3-205ENST00000415298 CCDC179H3BU77 68 aa16.77■□□□□ 0.28
AP1S3-205ENST00000415298 RPL27P61353 136 aaKnown RBP16.77■□□□□ 0.28
AP1S3-205ENST00000415298 ARL16Q0P5N6 197 aa16.77■□□□□ 0.28
AP1S3-205ENST00000415298 KLRB1Q12918 225 aa16.77■□□□□ 0.28
AP1S3-205ENST00000415298 MED12LQ86YW9 2145 aa16.77■□□□□ 0.28
AP1S3-205ENST00000415298 ZNF295-AS1Q8N0V1 137 aa16.77■□□□□ 0.28
AP1S3-205ENST00000415298 TEX29Q8N6K0 151 aa16.77■□□□□ 0.28
AP1S3-205ENST00000415298 FREM1Q5H8C1 2179 aa16.77■□□□□ 0.27
AP1S3-205ENST00000415298 SRSF1Q07955 248 aaKnown RBP eCLIP16.76■□□□□ 0.27
AP1S3-205ENST00000415298 OR8B8Q15620 311 aa16.76■□□□□ 0.27
AP1S3-205ENST00000415298 OR4C12Q96R67 309 aa16.76■□□□□ 0.27
AP1S3-205ENST00000415298 ARHGAP21Q5T5U3 1957 aa16.76■□□□□ 0.27
AP1S3-205ENST00000415298 CENPVL3A0A0U1RRI6 287 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms