RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 CST9Q5W186 159 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 WDR74Q6RFH5 385 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 DGAT2L6Q6ZPD8 337 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 LINC00596Q86U02 117 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 C20orf196Q8IYI0 205 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 SAXO1Q8IYX7 474 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 MTURNQ8N3F0 131 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 CSNK1G2-AS1Q8NCQ2 148 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR4C13Q8NGP0 309 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR2T10Q8NGZ9 312 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR51E1Q8TCB6 317 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 SCGB1C1Q8TD33 95 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 ORAOV1Q8WV07 137 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 LSM10Q969L4 123 aaKnown RBP2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 ALKBH3Q96Q83 286 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 GPER1Q99527 375 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 GABRG3Q99928 467 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 RARRES2Q99969 163 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 SNHG12Q9BXW3 62 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 SH2D2AQ9NP31 389 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 FKBP11Q9NYL4 201 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 SS18L2Q9UHA2 77 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 LY96Q9Y6Y9 160 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 LTBP2Q14767 1821 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 TRPM6Q9BX84 2022 aa2.81□□□□□ -1.96
HMGB3P23-201ENST00000414981 MYOFQ9NZM1 2061 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 FANCMQ8IYD8 2048 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 TRBV6-6A0A0A6YYG2 114 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 IGKV1-9A0A0C4DH69 117 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 IGSF23A1L1A6 192 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 ZNF850A8MQ14 1090 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 FAM166BA8MTA8 275 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 ZNF727A8MUV8 499 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 SHISA9B4DS77 424 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 C10orf142B7Z368 130 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 C11orf98E9PRG8 122 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 H7BYZ3 331 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 K7EMT4 169 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 SDCBPO00560 298 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 PDE6DO43924 150 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 CXCL13O43927 109 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 PDCD6O75340 191 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR2J2O76002 312 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 TNFP01375 233 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 IGKV3-15P01624 115 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 STATHP02808 62 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 ZNF25P17030 456 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 TCN2P20062 427 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 OMGP23515 440 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 F2RP25116 425 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 HTR1DP28221 377 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 APLNRP35414 380 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 RPS27P42677 84 aaKnown RBP2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 GALR1P47211 349 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 PSMB3P49720 205 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 UBE2E1P51965 193 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 EFNA3P52797 238 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 DLX6P56179 175 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 KLF3P57682 345 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 FBXW4P57775 412 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 TPPP2P59282 170 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 CCL20P78556 96 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 MEF2BQ02080 365 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 ZNF92Q03936 586 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 RUNX3Q13761 415 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 MSMO1Q15800 293 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 HLA-DRB5Q30154 266 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 SMIM21Q3B7S5 101 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 MORN2Q502X0 79 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 C10orf128Q5T292 105 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 TEX43Q6ZNM6 134 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 PRSS41Q7RTY9 318 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 LYZL2Q7Z4W2 148 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 DEFB132Q7Z7B7 95 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 MARCH3Q86UD3 253 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 ZNF695Q8IW36 515 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 VKORC1L1Q8N0U8 176 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 PNKDQ8N490 385 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 TCTEX1D1Q8N7M0 179 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 ZFP62Q8NB50 900 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR4B1Q8NGF8 309 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR8B12Q8NGG6 310 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR10G9Q8NGN4 311 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR5C1Q8NGR4 320 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 C8orf46Q8TAG6 207 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 ZNF502Q8TBZ5 544 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 PIFOQ8TCI5 191 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 ZNF721Q8TF20 911 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 SDSLQ96GA7 329 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 UBE2E2Q96LR5 201 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 TBX15Q96SF7 602 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 NRTNQ99748 197 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 SMIM3Q9BZL3 60 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 SH3BGRL3Q9H299 93 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 MS4A6AQ9H2W1 248 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR51I2Q9H344 312 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 PPDPFQ9H3Y8 114 aa2.8□□□□□ -1.96
HMGB3P23-201ENST00000414981 RBKSQ9H477 322 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms