RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 LINC01619G3V211 115 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 CTDSPLO15194 276 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 RBFOX2O43251 390 aaKnown RBP eCLIP3.73□□□□□ -1.81
VPS41-205ENST00000414632 GSTZ1O43708 216 aaPredicted RBP3.73□□□□□ -1.81
VPS41-205ENST00000414632 B3GALNT1O75752 331 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 TBPP20226 339 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 S100GP29377 79 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 MRPS10P82664 201 aaKnown RBP3.73□□□□□ -1.81
VPS41-205ENST00000414632 RHOGP84095 191 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 SSBP1Q04837 148 aaKnown RBP3.73□□□□□ -1.81
VPS41-205ENST00000414632 EXOSC2Q13868 293 aaKnown RBP3.73□□□□□ -1.81
VPS41-205ENST00000414632 MEF2DQ14814 521 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 TRIM16LQ309B1 348 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 AARDQ4LEZ3 155 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 ZNF57Q68EA5 555 aaPredicted RBP3.73□□□□□ -1.81
VPS41-205ENST00000414632 LPCAT3Q6P1A2 487 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 Q8N402 240 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 ZNF114Q8NC26 417 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 WFDC9Q8NEX5 89 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 TERB2Q8NHR7 220 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 VSTM2AQ8TAG5 236 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 DCUN1D4Q92564 292 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 DLX4Q92988 240 aaPredicted RBP3.73□□□□□ -1.81
VPS41-205ENST00000414632 TP53RKQ96S44 253 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 SPIN2AQ99865 258 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 SPIN2BQ9BPZ2 258 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 SOSTQ9BQB4 213 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 RTBDNQ9BSG5 229 aaPredicted RBP3.73□□□□□ -1.81
VPS41-205ENST00000414632 KRTAP9-3Q9BYQ3 159 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 COMMD5Q9GZQ3 224 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 C5orf66Q9H5L9 145 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 ZC4H2Q9NQZ6 224 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 COMMD9Q9P000 198 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 COPZ2Q9P299 210 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 C14orf166Q9Y224 244 aaKnown RBP3.73□□□□□ -1.81
VPS41-205ENST00000414632 TMED3Q9Y3Q3 217 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 OR51B2Q9Y5P1 312 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 SELENOKQ9Y6D0 94 aa3.73□□□□□ -1.81
VPS41-205ENST00000414632 IGLV5-37A0A075B6J1 123 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 A0A0G2JRQ6 117 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 C3orf85A0A1B0GTC6 90 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 WI2-2373I1.2A0A1W2PRP0 233 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 IGLC7A0M8Q6 106 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 MFSD2BA6NFX1 497 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 C15orf61A6NNL5 157 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 H0Y980 276 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 ZNF701M0R085 212 aaPredicted RBP3.72□□□□□ -1.81
VPS41-205ENST00000414632 OVOL1O14753 267 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 SAP30O75446 220 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 SNAPC5O75971 98 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 IGKV1-5P01602 117 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 HLA-AP01891 365 aaKnown RBP3.72□□□□□ -1.81
VPS41-205ENST00000414632 HSPB1P04792 205 aaKnown RBP3.72□□□□□ -1.81
VPS41-205ENST00000414632 SERPINE2P07093 398 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 CTSDP07339 412 aaPredicted RBP3.72□□□□□ -1.81
VPS41-205ENST00000414632 OR5AC1P0C628 307 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 OR8U8P0C7N1 319 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 TRAPPC2P0DI81 140 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 TRAPPC2BP0DI82 140 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 OR13C7P0DN81 318 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 DEFA4P12838 97 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 PSMB6P28072 239 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 SLC6A1P30531 599 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 MAS1LP35410 378 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 AKR1C2P52895 323 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 RELQ04864 619 aaPredicted RBP3.72□□□□□ -1.81
VPS41-205ENST00000414632 ATP5G2Q06055 141 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 WT1-ASQ06250 92 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 POU2AF1Q16633 256 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 C15orf32Q32M92 178 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 PDLIM3Q53GG5 364 aaPredicted RBP3.72□□□□□ -1.81
VPS41-205ENST00000414632 SPANXN2Q5MJ10 180 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 KPRPQ5T749 579 aaPredicted RBP3.72□□□□□ -1.81
VPS41-205ENST00000414632 H2BFWTQ7Z2G1 175 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 TMED4Q7Z7H5 227 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 TOMM5Q8N4H5 51 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 TTC9CQ8N5M4 171 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 CCDC71LQ8N9Z2 235 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 OR6Q1Q8NGQ2 317 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 OR4A16Q8NH70 328 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 OR4A5Q8NH83 315 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 RNASE11Q8TAA1 199 aaKnown RBP3.72□□□□□ -1.81
VPS41-205ENST00000414632 LHFPL5Q8TAF8 219 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 ZFAND1Q8TCF1 268 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 MRAPQ8TCY5 172 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 CD300LFQ8TDQ1 290 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 NTN5Q8WTR8 489 aaPredicted RBP3.72□□□□□ -1.81
VPS41-205ENST00000414632 TMED6Q8WW62 240 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 ZNF486Q96H40 463 aaPredicted RBP3.72□□□□□ -1.81
VPS41-205ENST00000414632 SEC22AQ96IW7 307 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 PRRT1Q99946 306 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 NEURL2Q9BR09 285 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 SPXQ9BT56 116 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 SRRQ9GZT4 340 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 NAA60Q9H7X0 242 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 RABL2AQ9UBK7 228 aaPredicted RBP3.72□□□□□ -1.81
VPS41-205ENST00000414632 RABL2BQ9UNT1 228 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 WDR83OSQ9Y284 106 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 ZNF257Q9Y2Q1 563 aa3.72□□□□□ -1.81
VPS41-205ENST00000414632 IGLV11-55A0A075B6I3 123 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms