RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 HAPLN4Q86UW8 402 aa13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 ZNF114Q8NC26 417 aa13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 TNCP24821 2201 aa13.22□□□□□ -0.29
SCAMP4-204ENST00000414057 CGB1A6NKQ9 187 aa13.22□□□□□ -0.29
SCAMP4-204ENST00000414057 HLA-DRB1P01911 266 aa13.22□□□□□ -0.29
SCAMP4-204ENST00000414057 RAB14P61106 215 aa13.22□□□□□ -0.29
SCAMP4-204ENST00000414057 ZNF562Q6V9R5 426 aa13.22□□□□□ -0.29
SCAMP4-204ENST00000414057 ETV3LQ6ZN32 361 aa13.22□□□□□ -0.29
SCAMP4-204ENST00000414057 Q8N9W7 124 aa13.22□□□□□ -0.29
SCAMP4-204ENST00000414057 LRRC20Q8TCA0 184 aa13.22□□□□□ -0.29
SCAMP4-204ENST00000414057 SRSF12Q8WXF0 261 aaKnown RBP13.22□□□□□ -0.29
SCAMP4-204ENST00000414057 GNPNAT1Q96EK6 184 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-204ENST00000414057 TMEM147Q9BVK8 224 aa13.22□□□□□ -0.29
SCAMP4-204ENST00000414057 LINC00527Q9UJ94 153 aa13.22□□□□□ -0.29
SCAMP4-204ENST00000414057 TGP01266 2768 aa13.21□□□□□ -0.29
SCAMP4-204ENST00000414057 FNDC10F2Z333 226 aa13.21□□□□□ -0.3
SCAMP4-204ENST00000414057 CNIH1O95406 144 aa13.21□□□□□ -0.3
SCAMP4-204ENST00000414057 IFNA4P05014 189 aa13.21□□□□□ -0.3
SCAMP4-204ENST00000414057 SEC11BP0C7V7 166 aa13.21□□□□□ -0.3
SCAMP4-204ENST00000414057 MYCNOSP40205 109 aa13.21□□□□□ -0.3
SCAMP4-204ENST00000414057 GNB1P62873 340 aa13.21□□□□□ -0.3
SCAMP4-204ENST00000414057 DLK1P80370 383 aa13.21□□□□□ -0.3
SCAMP4-204ENST00000414057 ARL16Q0P5N6 197 aa13.21□□□□□ -0.3
SCAMP4-204ENST00000414057 VWC2Q2TAL6 325 aa13.21□□□□□ -0.3
SCAMP4-204ENST00000414057 ALKAL2Q6UX46 152 aa13.21□□□□□ -0.3
SCAMP4-204ENST00000414057 LINC00482Q8N8I6 264 aa13.21□□□□□ -0.3
SCAMP4-204ENST00000414057 OR10W1Q8NGF6 305 aa13.21□□□□□ -0.3
SCAMP4-204ENST00000414057 UQCC1Q9NVA1 299 aa13.21□□□□□ -0.3
SCAMP4-204ENST00000414057 ZMAT5Q9UDW3 170 aaKnown RBP13.21□□□□□ -0.3
SCAMP4-204ENST00000414057 IGLC7A0M8Q6 106 aa13.2□□□□□ -0.3
SCAMP4-204ENST00000414057 PRSS46E5RG02 174 aa13.2□□□□□ -0.3
SCAMP4-204ENST00000414057 E7EUB6 86 aa13.2□□□□□ -0.3
SCAMP4-204ENST00000414057 FCN1O00602 326 aa13.2□□□□□ -0.3
SCAMP4-204ENST00000414057 RNASE2P10153 161 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-204ENST00000414057 WT1-ASQ06250 92 aa13.2□□□□□ -0.3
SCAMP4-204ENST00000414057 NDUFA5Q16718 116 aa13.2□□□□□ -0.3
SCAMP4-204ENST00000414057 C10orf55Q5SWW7 151 aa13.2□□□□□ -0.3
SCAMP4-204ENST00000414057 SLC25A24Q6NUK1 477 aa13.2□□□□□ -0.3
SCAMP4-204ENST00000414057 KLHL30-AS1Q8NEE0 82 aa13.2□□□□□ -0.3
SCAMP4-204ENST00000414057 SCGB1C1Q8TD33 95 aa13.2□□□□□ -0.3
SCAMP4-204ENST00000414057 SLC25A32Q9H2D1 315 aa13.2□□□□□ -0.3
SCAMP4-204ENST00000414057 A0A1B0GW64 132 aa13.19□□□□□ -0.3
SCAMP4-204ENST00000414057 TEX22C9J3V5 150 aa13.19□□□□□ -0.3
SCAMP4-204ENST00000414057 OR13C7P0DN81 318 aa13.19□□□□□ -0.3
SCAMP4-204ENST00000414057 SPP1P10451 314 aa13.19□□□□□ -0.3
SCAMP4-204ENST00000414057 SSBP2P81877 361 aaPredicted RBP13.19□□□□□ -0.3
SCAMP4-204ENST00000414057 FXYD3Q14802 87 aa13.19□□□□□ -0.3
SCAMP4-204ENST00000414057 C8orf86Q6ZUL3 223 aa13.19□□□□□ -0.3
SCAMP4-204ENST00000414057 OR1L6Q8NGR2 347 aa13.19□□□□□ -0.3
SCAMP4-204ENST00000414057 RNASEH2CQ8TDP1 164 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-204ENST00000414057 TMEM170AQ8WVE7 144 aa13.19□□□□□ -0.3
SCAMP4-204ENST00000414057 CORTO00230 105 aa13.18□□□□□ -0.3
SCAMP4-204ENST00000414057 ELANEP08246 267 aa13.18□□□□□ -0.3
SCAMP4-204ENST00000414057 CLLU1Q5K131 121 aa13.18□□□□□ -0.3
SCAMP4-204ENST00000414057 PVRIGQ6DKI7 326 aa13.18□□□□□ -0.3
SCAMP4-204ENST00000414057 HSD17B11Q8NBQ5 300 aa13.18□□□□□ -0.3
SCAMP4-204ENST00000414057 RNF141Q8WVD5 230 aa13.18□□□□□ -0.3
SCAMP4-204ENST00000414057 LINC01548A6NM66 108 aa13.17□□□□□ -0.3
SCAMP4-204ENST00000414057 SOX15O60248 233 aa13.17□□□□□ -0.3
SCAMP4-204ENST00000414057 MPDU1O75352 247 aa13.17□□□□□ -0.3
SCAMP4-204ENST00000414057 GPX4P36969 197 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-204ENST00000414057 CX3CL1P78423 397 aa13.17□□□□□ -0.3
SCAMP4-204ENST00000414057 FOXE3Q13461 319 aa13.17□□□□□ -0.3
SCAMP4-204ENST00000414057 OR1P1Q8NH06 330 aa13.17□□□□□ -0.3
SCAMP4-204ENST00000414057 TMED6Q8WW62 240 aa13.17□□□□□ -0.3
SCAMP4-204ENST00000414057 CACNG8Q8WXS5 425 aa13.17□□□□□ -0.3
SCAMP4-204ENST00000414057 ARPC1AQ92747 370 aa13.17□□□□□ -0.3
SCAMP4-204ENST00000414057 PSMG3Q9BT73 122 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-204ENST00000414057 WDR61Q9GZS3 305 aaKnown RBP13.17□□□□□ -0.3
SCAMP4-204ENST00000414057 ZNF580Q9UK33 172 aa13.17□□□□□ -0.3
SCAMP4-204ENST00000414057 RAB5CP51148 216 aa13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 EGFEM1PQ0D2K5 195 aa13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 TMEM68Q96MH6 324 aa13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 P2RX4Q99571 388 aa13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 NPVFQ9HCQ7 196 aa13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 TIMM9Q9Y5J7 89 aa13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 UBE2L5PA0A1B0GUS4 154 aa13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 UMAD1C9J7I0 102 aa13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 IGF1P05019 195 aa13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 ATP6V0CP27449 155 aa13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 CDX1P47902 265 aaPredicted RBP13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 SULT1A2P50226 295 aa13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 ETFRF1Q6IPR1 90 aa13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 RNF152Q8N8N0 203 aa13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 ABHD5Q8WTS1 349 aa13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 F11RQ9Y624 299 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-204ENST00000414057 NOTCH3Q9UM47 2321 aa13.15□□□□□ -0.3
SCAMP4-204ENST00000414057 IGHV7-81A0A0B4J1V7 117 aa13.15□□□□□ -0.3
SCAMP4-204ENST00000414057 NPIPB5A8MRT5 1133 aa13.15□□□□□ -0.3
SCAMP4-204ENST00000414057 CCL24O00175 119 aa13.15□□□□□ -0.3
SCAMP4-204ENST00000414057 CYB5BO43169 146 aa13.15□□□□□ -0.3
SCAMP4-204ENST00000414057 RPLP1P05386 114 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-204ENST00000414057 AREGP15514 252 aa13.15□□□□□ -0.3
SCAMP4-204ENST00000414057 SERF2P84101 59 aa13.15□□□□□ -0.3
SCAMP4-204ENST00000414057 CD69Q07108 199 aa13.15□□□□□ -0.3
SCAMP4-204ENST00000414057 WDR83OSQ9Y284 106 aa13.15□□□□□ -0.3
SCAMP4-204ENST00000414057 RPS10-NUDT3A0A1W2PQS6 291 aa13.14□□□□□ -0.31
SCAMP4-204ENST00000414057 C17orf112F2Z3M2 114 aa13.14□□□□□ -0.31
SCAMP4-204ENST00000414057 IGHG4P01861 327 aa13.14□□□□□ -0.31
SCAMP4-204ENST00000414057 CRYGCP07315 174 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 250.9 ms