RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 NUP35Q8NFH5 326 aa11.86□□□□□ -0.51
SEMA3F-202ENST00000413852 OR2D3Q8NGH3 330 aa11.86□□□□□ -0.51
SEMA3F-202ENST00000413852 PMCHL2Q9BQD1 86 aa11.86□□□□□ -0.51
SEMA3F-202ENST00000413852 SLC25A2Q9BXI2 301 aa11.86□□□□□ -0.51
SEMA3F-202ENST00000413852 ZNF331Q9NQX6 463 aaPredicted RBP11.86□□□□□ -0.51
SEMA3F-202ENST00000413852 PCNX1Q96RV3 2341 aa11.86□□□□□ -0.51
SEMA3F-202ENST00000413852 M0R2Z0 102 aa11.86□□□□□ -0.51
SEMA3F-202ENST00000413852 IGLL1P15814 213 aa11.86□□□□□ -0.51
SEMA3F-202ENST00000413852 ZNF137PP52743 207 aa11.86□□□□□ -0.51
SEMA3F-202ENST00000413852 DLX1P56177 255 aa11.86□□□□□ -0.51
SEMA3F-202ENST00000413852 RNF24Q9Y225 148 aa11.86□□□□□ -0.51
SEMA3F-202ENST00000413852 SMIM27A0A1W2PRY6 76 aa11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 TSPOP30536 169 aa11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 TMEM164Q5U3C3 297 aa11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 LEMD1Q68G75 181 aa11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 OSTCQ9NRP0 149 aa11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 FOXA2Q9Y261 457 aaPredicted RBP11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 TRGV8A0A0C4DH27 118 aa11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 HSBP1O75506 76 aa11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 SAA1P0DJI8 122 aaPredicted RBP11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 CT45A6P0DMU7 189 aa11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 CT45A5P0DMU8 189 aa11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 CT45A7P0DMV0 189 aa11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 PPOXP50336 477 aa11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 LINC00322Q6ZN03 302 aaPredicted RBP11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 C1orf210Q8IVY1 113 aa11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 NUDT10Q8NFP7 164 aa11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 NUDT11Q96G61 164 aa11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 SLC25A33Q9BSK2 321 aa11.85□□□□□ -0.51
SEMA3F-202ENST00000413852 LINC00614P0C842 121 aa11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 STUMQ69YW2 141 aa11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 C22orf34Q6ZV56 151 aa11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 FAM167A-AS1Q96KT0 104 aa11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 LRBAP50851 2863 aa11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 hDV102S1A0JD36 115 aa11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 C20orf202A1L168 122 aa11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 TCTAP57738 103 aa11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 FOXE3Q13461 319 aa11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 OR10J3Q5JRS4 329 aa11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 ZNF891A8MT65 544 aaPredicted RBP11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 F2RL2O00254 374 aa11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 CEACAM8P31997 349 aaPredicted RBP11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 RNF151Q2KHN1 245 aa11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 WDR73Q6P4I2 378 aa11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 OR8B2Q96RD0 313 aa11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 TMEM167BQ9NRX6 74 aa11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 AMMECR1Q9Y4X0 333 aaPredicted RBP11.84□□□□□ -0.51
SEMA3F-202ENST00000413852 IZUMO1RA6ND01 250 aa11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 FAM181BA6NEQ2 426 aa11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 HIGD1CA8MV81 97 aa11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 MOSP00540 346 aa11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 PEAR1Q5VY43 1037 aaPredicted RBP11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 PATE2Q6UY27 113 aa11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 FDCSPQ8NFU4 85 aa11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 NPIPB3Q92617 1050 aa11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 URB1-AS1Q96HZ7 61 aa11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 GSX1Q9H4S2 264 aaPredicted RBP11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 TNFRSF19Q9NS68 423 aa11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 PIEZO2Q9H5I5 2752 aa11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 TRAV9-1A0A075B6T8 112 aa11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 C8orf88P0DMB2 117 aa11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 RNASE2P10153 161 aaKnown RBP11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 FNDC4Q9H6D8 234 aaPredicted RBP11.83□□□□□ -0.52
SEMA3F-202ENST00000413852 CCL3L1P16619 93 aa11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 CBY1Q9Y3M2 126 aa11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 LOC102724200A0A096LPH7 203 aaPredicted RBP11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 KBTBD11-OT1A0A1B0GTJ5 212 aa11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 UPK2O00526 184 aa11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 MRPL20Q9BYC9 149 aaKnown RBP11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 TRBV9A0A0B4J1U6 114 aa11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 FAM90A9PA6NNJ1 464 aa11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 J3QW42 95 aa11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 SNAI2O43623 268 aa11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 HLA-DQA1P01909 254 aa11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 CGB3P0DN86 165 aa11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 CGB7P0DN87 165 aa11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 ORM2P19652 201 aa11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 ZPBPQ9BS86 351 aa11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 LY96Q9Y6Y9 160 aa11.82□□□□□ -0.52
SEMA3F-202ENST00000413852 DCHS2Q6V1P9 2916 aa11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 IGHV3-72A0A0B4J1Y9 119 aa11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 C21orf140B9A014 251 aa11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 SELENOVP59797 346 aa11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 PRCDQ00LT1 54 aa11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 RITA1Q96K30 269 aa11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 TPSG1Q9NRR2 321 aa11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 MT-ND6P03923 174 aa11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 SLC25A10Q9UBX3 287 aaPredicted RBP11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 ASH1LQ9NR48 2969 aaKnown RBP11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 RAI1Q7Z5J4 1906 aaPredicted RBP11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 CA7P43166 264 aa11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 ZNF329Q86UD4 541 aa11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 PGLYRP4Q96LB8 373 aa11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 FER1L6-AS2Q96M78 137 aa11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 ARL2-SNX15V9GYD0 113 aa11.81□□□□□ -0.52
SEMA3F-202ENST00000413852 COX7A2P2O60397 106 aa11.8□□□□□ -0.52
SEMA3F-202ENST00000413852 HCP5Q6MZN7 132 aa11.8□□□□□ -0.52
SEMA3F-202ENST00000413852 MBD6Q96DN6 1003 aa11.8□□□□□ -0.52
SEMA3F-202ENST00000413852 ALKBH7Q9BT30 221 aaPredicted RBP11.8□□□□□ -0.52
SEMA3F-202ENST00000413852 LOC105371242A0A075B767 164 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms