RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 A0A0B4J2A0 478 aa11.76□□□□□ -0.53
MCF2L-211ENST00000413354 RPS10-NUDT3A0A1W2PQS6 291 aa11.76□□□□□ -0.53
MCF2L-211ENST00000413354 CEBPZOSA8MTT3 80 aa11.76□□□□□ -0.53
MCF2L-211ENST00000413354 IGHV3-48P01763 117 aa11.76□□□□□ -0.53
MCF2L-211ENST00000413354 BSXQ3C1V8 233 aa11.76□□□□□ -0.53
MCF2L-211ENST00000413354 LINC00322Q6ZN03 302 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-211ENST00000413354 ZNF600Q6ZNG1 722 aa11.76□□□□□ -0.53
MCF2L-211ENST00000413354 LGI3Q8N145 548 aa11.76□□□□□ -0.53
MCF2L-211ENST00000413354 MUC7Q8TAX7 377 aa11.76□□□□□ -0.53
MCF2L-211ENST00000413354 SLC25A21Q9BQT8 299 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-211ENST00000413354 HEYLQ9NQ87 328 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-211ENST00000413354 SHPKQ9UHJ6 478 aa11.76□□□□□ -0.53
MCF2L-211ENST00000413354 SMPXQ9UHP9 88 aa11.76□□□□□ -0.53
MCF2L-211ENST00000413354 IGHV7-4-1A0A0J9YVY3 117 aa11.75□□□□□ -0.53
MCF2L-211ENST00000413354 OR4C46A6NHA9 309 aa11.75□□□□□ -0.53
MCF2L-211ENST00000413354 ZNF207O43670 478 aaKnown RBP11.75□□□□□ -0.53
MCF2L-211ENST00000413354 CCR6P51684 374 aa11.75□□□□□ -0.53
MCF2L-211ENST00000413354 NOXA1Q86UR1 476 aa11.75□□□□□ -0.53
MCF2L-211ENST00000413354 TMEM116Q8NCL8 245 aa11.75□□□□□ -0.53
MCF2L-211ENST00000413354 HIPK2Q9H2X6 1198 aa11.75□□□□□ -0.53
MCF2L-211ENST00000413354 TRAV14DV4A0A0A6YYC5 116 aa11.74□□□□□ -0.53
MCF2L-211ENST00000413354 DUXBA0A1W2PPF3 345 aa11.74□□□□□ -0.53
MCF2L-211ENST00000413354 RBMY1BA6NDE4 496 aaKnown RBP11.74□□□□□ -0.53
MCF2L-211ENST00000413354 RBMY1EA6NEQ0 496 aaKnown RBP11.74□□□□□ -0.53
MCF2L-211ENST00000413354 CLN5O75503 358 aa11.74□□□□□ -0.53
MCF2L-211ENST00000413354 CD5P06127 495 aa11.74□□□□□ -0.53
MCF2L-211ENST00000413354 RBMY1DP0C7P1 496 aaKnown RBP11.74□□□□□ -0.53
MCF2L-211ENST00000413354 INPP1P49441 399 aa11.74□□□□□ -0.53
MCF2L-211ENST00000413354 SUPT4H1P63272 117 aaKnown RBP11.74□□□□□ -0.53
MCF2L-211ENST00000413354 SMCO1Q147U7 214 aa11.74□□□□□ -0.53
MCF2L-211ENST00000413354 C2orf83Q53S99 150 aa11.74□□□□□ -0.53
MCF2L-211ENST00000413354 TMEM128Q5BJH2 165 aa11.74□□□□□ -0.53
MCF2L-211ENST00000413354 TMED4Q7Z7H5 227 aa11.74□□□□□ -0.53
MCF2L-211ENST00000413354 SLC24A4Q8NFF2 622 aa11.74□□□□□ -0.53
MCF2L-211ENST00000413354 OR4X1Q8NH49 305 aa11.74□□□□□ -0.53
MCF2L-211ENST00000413354 RNASEH2CQ8TDP1 164 aaKnown RBP11.74□□□□□ -0.53
MCF2L-211ENST00000413354 RHPN1-AS1Q9BWJ2 59 aa11.74□□□□□ -0.53
MCF2L-211ENST00000413354 TRAV30A0A087WSZ9 112 aa11.73□□□□□ -0.53
MCF2L-211ENST00000413354 CHEK1O14757 476 aa11.73□□□□□ -0.53
MCF2L-211ENST00000413354 TMEM50AO95807 157 aa11.73□□□□□ -0.53
MCF2L-211ENST00000413354 SLC25A4P12235 298 aa11.73□□□□□ -0.53
MCF2L-211ENST00000413354 NMSQ5H8A3 153 aa11.73□□□□□ -0.53
MCF2L-211ENST00000413354 ETFRF1Q6IPR1 90 aa11.73□□□□□ -0.53
MCF2L-211ENST00000413354 ZNF414Q96IQ9 312 aa11.73□□□□□ -0.53
MCF2L-211ENST00000413354 FAM110AQ9BQ89 295 aa11.73□□□□□ -0.53
MCF2L-211ENST00000413354 GGTLC1Q9BX51 225 aa11.73□□□□□ -0.53
MCF2L-211ENST00000413354 SRRQ9GZT4 340 aa11.73□□□□□ -0.53
MCF2L-211ENST00000413354 FNDC4Q9H6D8 234 aaPredicted RBP11.73□□□□□ -0.53
MCF2L-211ENST00000413354 TMEM231Q9H6L2 316 aa11.73□□□□□ -0.53
MCF2L-211ENST00000413354 PUS1Q9Y606 427 aaKnown RBP eCLIP11.73□□□□□ -0.53
MCF2L-211ENST00000413354 LOC102724200A0A096LPH7 203 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-211ENST00000413354 NPY1RP25929 384 aa11.72□□□□□ -0.53
MCF2L-211ENST00000413354 TNFRSF9Q07011 255 aa11.72□□□□□ -0.53
MCF2L-211ENST00000413354 TRIQKQ629K1 86 aa11.72□□□□□ -0.53
MCF2L-211ENST00000413354 TOMM20LQ6UXN7 152 aa11.72□□□□□ -0.53
MCF2L-211ENST00000413354 LYZL2Q7Z4W2 148 aa11.72□□□□□ -0.53
MCF2L-211ENST00000413354 RNF2Q99496 336 aa11.72□□□□□ -0.53
MCF2L-211ENST00000413354 PRR13Q9NZ81 148 aa11.72□□□□□ -0.53
MCF2L-211ENST00000413354 NDUFA13Q9P0J0 144 aa11.72□□□□□ -0.53
MCF2L-211ENST00000413354 HSPB7Q9UBY9 170 aa11.72□□□□□ -0.53
MCF2L-211ENST00000413354 A0A1B0GU03 582 aa11.71□□□□□ -0.53
MCF2L-211ENST00000413354 NAP1L6A6NFF2 107 aa11.71□□□□□ -0.53
MCF2L-211ENST00000413354 LYL1P12980 280 aa11.71□□□□□ -0.53
MCF2L-211ENST00000413354 VAMP1P23763 118 aa11.71□□□□□ -0.53
MCF2L-211ENST00000413354 CMC4P56277 68 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-211ENST00000413354 RBMS2Q15434 407 aaKnown RBP11.71□□□□□ -0.53
MCF2L-211ENST00000413354 OR1S1Q8NH92 325 aa11.71□□□□□ -0.53
MCF2L-211ENST00000413354 ZFAND3Q9H8U3 227 aa11.71□□□□□ -0.53
MCF2L-211ENST00000413354 EDA2RQ9HAV5 297 aa11.71□□□□□ -0.53
MCF2L-211ENST00000413354 U3KQ87 197 aa11.71□□□□□ -0.53
MCF2L-211ENST00000413354 A0A1W2PS18 150 aa11.7□□□□□ -0.54
MCF2L-211ENST00000413354 NXPH3O95157 252 aa11.7□□□□□ -0.54
MCF2L-211ENST00000413354 IFNA10P01566 189 aa11.7□□□□□ -0.54
MCF2L-211ENST00000413354 ATP5IP56385 69 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-211ENST00000413354 UBE2MP61081 183 aaKnown RBP11.7□□□□□ -0.54
MCF2L-211ENST00000413354 PAFAH1B2P68402 229 aa11.7□□□□□ -0.54
MCF2L-211ENST00000413354 CENPSQ8N2Z9 138 aa11.7□□□□□ -0.54
MCF2L-211ENST00000413354 LRTM2Q8N967 370 aa11.7□□□□□ -0.54
MCF2L-211ENST00000413354 OR1S2Q8NGQ3 325 aa11.7□□□□□ -0.54
MCF2L-211ENST00000413354 DTD1Q8TEA8 209 aa11.7□□□□□ -0.54
MCF2L-211ENST00000413354 NARS2Q96I59 477 aaKnown RBP11.7□□□□□ -0.54
MCF2L-211ENST00000413354 METTL26Q96S19 204 aa11.7□□□□□ -0.54
MCF2L-211ENST00000413354 VSIRQ9H7M9 311 aa11.7□□□□□ -0.54
MCF2L-211ENST00000413354 UBQLN2Q9UHD9 624 aa11.7□□□□□ -0.54
MCF2L-211ENST00000413354 IGHV3-49A0A0A0MS15 119 aa11.69□□□□□ -0.54
MCF2L-211ENST00000413354 SLC25A6P12236 298 aa11.69□□□□□ -0.54
MCF2L-211ENST00000413354 APOC4P55056 127 aa11.69□□□□□ -0.54
MCF2L-211ENST00000413354 ODF3L2Q3SX64 289 aa11.69□□□□□ -0.54
MCF2L-211ENST00000413354 TCF24Q7RTU0 167 aa11.69□□□□□ -0.54
MCF2L-211ENST00000413354 RETNQ9HD89 108 aa11.69□□□□□ -0.54
MCF2L-211ENST00000413354 MRPL36Q9P0J6 103 aaKnown RBP11.69□□□□□ -0.54
MCF2L-211ENST00000413354 DNAH7Q8WXX0 4024 aa11.69□□□□□ -0.54
MCF2L-211ENST00000413354 SFT2D2O95562 160 aa11.68□□□□□ -0.54
MCF2L-211ENST00000413354 NPPCP23582 126 aa11.68□□□□□ -0.54
MCF2L-211ENST00000413354 RND2P52198 227 aa11.68□□□□□ -0.54
MCF2L-211ENST00000413354 CASC10Q5T4H9 136 aa11.68□□□□□ -0.54
MCF2L-211ENST00000413354 FAM90A2PQ658T7 463 aa11.68□□□□□ -0.54
MCF2L-211ENST00000413354 PRSS54Q6PEW0 395 aa11.68□□□□□ -0.54
MCF2L-211ENST00000413354 ST8SIA2Q92186 375 aa11.68□□□□□ -0.54
MCF2L-211ENST00000413354 RBKSQ9H477 322 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms