RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 TGIF2LXQ8IUE1 241 aa11.22□□□□□ -0.61
NUB1-201ENST00000413040 ST6GALNAC3Q8NDV1 305 aa11.22□□□□□ -0.61
NUB1-201ENST00000413040 CBLN4Q9NTU7 201 aa11.22□□□□□ -0.61
NUB1-201ENST00000413040 SSX2Q16385 188 aa11.21□□□□□ -0.61
NUB1-201ENST00000413040 C19orf35Q6ZS72 473 aa11.21□□□□□ -0.61
NUB1-201ENST00000413040 OR4C13Q8NGP0 309 aa11.21□□□□□ -0.61
NUB1-201ENST00000413040 BLNKQ8WV28 456 aa11.21□□□□□ -0.61
NUB1-201ENST00000413040 HSPB9Q9BQS6 159 aa11.21□□□□□ -0.61
NUB1-201ENST00000413040 SLC25A33Q9BSK2 321 aa11.21□□□□□ -0.61
NUB1-201ENST00000413040 NCOR1P1Q9H4R4 102 aa11.21□□□□□ -0.61
NUB1-201ENST00000413040 DNAJC4Q9NNZ3 241 aa11.21□□□□□ -0.61
NUB1-201ENST00000413040 TPSG1Q9NRR2 321 aa11.21□□□□□ -0.61
NUB1-201ENST00000413040 ZNF355PQ9NSJ1 428 aa11.21□□□□□ -0.61
NUB1-201ENST00000413040 CACNA1BQ00975 2339 aa11.21□□□□□ -0.62
NUB1-201ENST00000413040 DLL1O00548 723 aa11.21□□□□□ -0.62
NUB1-201ENST00000413040 MOSP00540 346 aa11.21□□□□□ -0.62
NUB1-201ENST00000413040 PRR31Q5SQ13 230 aa11.21□□□□□ -0.62
NUB1-201ENST00000413040 DMRTC2Q8IXT2 367 aaPredicted RBP11.21□□□□□ -0.62
NUB1-201ENST00000413040 ZNF430Q9H8G1 570 aaPredicted RBP11.21□□□□□ -0.62
NUB1-201ENST00000413040 TMEM106BQ9NUM4 274 aa11.21□□□□□ -0.62
NUB1-201ENST00000413040 NAGKQ9UJ70 344 aa11.21□□□□□ -0.62
NUB1-201ENST00000413040 LYNX1G3V0Z9 82 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 LYNX1P0DP58 116 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 WT1-ASQ06250 92 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 IBA57Q5T440 356 aaKnown RBP11.2□□□□□ -0.62
NUB1-201ENST00000413040 TEX36Q5VZQ5 186 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 FNDC4Q9H6D8 234 aaPredicted RBP11.2□□□□□ -0.62
NUB1-201ENST00000413040 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 V9GYV3 84 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 PTPRQQ9UMZ3 2332 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 VSTM5A8MXK1 200 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 C9JCJ5 164 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 H3BTX0 84 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 LGALS4P56470 323 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 RANP62826 216 aaKnown RBP11.2□□□□□ -0.62
NUB1-201ENST00000413040 C11orf52Q96A22 123 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 TMEM178BH3BS89 294 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 FCN3O75636 299 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 USF1P22415 310 aaPredicted RBP11.2□□□□□ -0.62
NUB1-201ENST00000413040 PRR30Q53SZ7 412 aaPredicted RBP11.2□□□□□ -0.62
NUB1-201ENST00000413040 ZNF833PQ6ZTB9 187 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 NDUFA4L2Q9NRX3 87 aa11.2□□□□□ -0.62
NUB1-201ENST00000413040 TPPP2P59282 170 aa11.19□□□□□ -0.62
NUB1-201ENST00000413040 YPEL3P61236 119 aaPredicted RBP11.19□□□□□ -0.62
NUB1-201ENST00000413040 DNLZQ5SXM8 178 aa11.19□□□□□ -0.62
NUB1-201ENST00000413040 C10orf113Q5VZT2 155 aa11.19□□□□□ -0.62
NUB1-201ENST00000413040 ZNF705AQ6ZN79 300 aaPredicted RBP11.19□□□□□ -0.62
NUB1-201ENST00000413040 VN1R17PQ8TDU5 208 aa11.19□□□□□ -0.62
NUB1-201ENST00000413040 RITA1Q96K30 269 aa11.19□□□□□ -0.62
NUB1-201ENST00000413040 ARHGAP32A7KAX9 2087 aa11.19□□□□□ -0.62
NUB1-201ENST00000413040 RPL19P84098 196 aaKnown RBP11.19□□□□□ -0.62
NUB1-201ENST00000413040 NUP37Q8NFH4 326 aa11.19□□□□□ -0.62
NUB1-201ENST00000413040 NOL4LQ96MY1 436 aaPredicted RBP11.19□□□□□ -0.62
NUB1-201ENST00000413040 PAXXQ9BUH6 204 aa11.19□□□□□ -0.62
NUB1-201ENST00000413040 MRPL36Q9P0J6 103 aaKnown RBP11.19□□□□□ -0.62
NUB1-201ENST00000413040 CTSZQ9UBR2 303 aa11.19□□□□□ -0.62
NUB1-201ENST00000413040 THBDP07204 575 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 PMCHP20382 165 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 CASP6P55212 293 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 KRTDAPP60985 99 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 TNXAQ16473 311 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 OR5AN1Q8NGI8 311 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 OR1B1Q8NGR6 318 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 NDUFAF3Q9BU61 184 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 PAM16Q9Y3D7 125 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 PRB4P10163 310 aaPredicted RBP11.18□□□□□ -0.62
NUB1-201ENST00000413040 SUB1P53999 127 aaKnown RBP eCLIP11.18□□□□□ -0.622e-6■■■■□ 21.3
NUB1-201ENST00000413040 GNG5P63218 68 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 MEF2CQ06413 473 aaPredicted RBP11.18□□□□□ -0.62
NUB1-201ENST00000413040 C3orf36Q3SXR2 165 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 VSTM2AQ8TAG5 236 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 ATG101Q9BSB4 218 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 WASHC3Q9Y3C0 194 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 AMMECR1Q9Y4X0 333 aaPredicted RBP11.18□□□□□ -0.62
NUB1-201ENST00000413040 ANKHD1Q8IWZ3 2542 aaKnown RBP11.18□□□□□ -0.62
NUB1-201ENST00000413040 A0A1W2PN81 502 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 ZNF253O75346 499 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 VMA21Q3ZAQ7 101 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 RNASE6Q93091 150 aaKnown RBP11.18□□□□□ -0.62
NUB1-201ENST00000413040 TP53TG3Q9ULZ0 132 aa11.18□□□□□ -0.62
NUB1-201ENST00000413040 POLR3KQ9Y2Y1 108 aaPredicted RBP11.18□□□□□ -0.62
NUB1-201ENST00000413040 TOX4O94842 621 aa11.17□□□□□ -0.62
NUB1-201ENST00000413040 COX7A1P24310 79 aa11.17□□□□□ -0.62
NUB1-201ENST00000413040 ATRXP46100 2492 aa11.17□□□□□ -0.62
NUB1-201ENST00000413040 FNDC10F2Z333 226 aa11.17□□□□□ -0.62
NUB1-201ENST00000413040 NTF3P20783 257 aa11.17□□□□□ -0.62
NUB1-201ENST00000413040 AMTP48728 403 aa11.17□□□□□ -0.62
NUB1-201ENST00000413040 TDRG1Q3Y452 100 aa11.17□□□□□ -0.62
NUB1-201ENST00000413040 FAM168AQ92567 244 aa11.17□□□□□ -0.62
NUB1-201ENST00000413040 GSX1Q9H4S2 264 aaPredicted RBP11.17□□□□□ -0.62
NUB1-201ENST00000413040 CNTFRP26992 372 aa11.16□□□□□ -0.62
NUB1-201ENST00000413040 TMEM177Q53S58 311 aa11.16□□□□□ -0.62
NUB1-201ENST00000413040 Q6ZWC4 215 aa11.16□□□□□ -0.62
NUB1-201ENST00000413040 LINC00305Q7Z4B0 112 aa11.16□□□□□ -0.62
NUB1-201ENST00000413040 SIGLECL1Q8N7X8 197 aa11.16□□□□□ -0.62
NUB1-201ENST00000413040 CACNG8Q8WXS5 425 aa11.16□□□□□ -0.62
NUB1-201ENST00000413040 TMEM186Q96B77 213 aa11.16□□□□□ -0.62
NUB1-201ENST00000413040 SLC25A2Q9BXI2 301 aa11.16□□□□□ -0.62
NUB1-201ENST00000413040 GNB4Q9HAV0 340 aa11.16□□□□□ -0.62
NUB1-201ENST00000413040 A0A1W2PPI3 338 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms