RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 DEFB131AP59861 70 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 Q56UQ5 140 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 LEMD1Q68G75 181 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 SLC25A24Q6NUK1 477 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 ZNF818PQ6ZRF7 136 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 TCF24Q7RTU0 167 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 OR5H2Q8NGV7 314 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 OR6F1Q8NGZ6 308 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 SCARB1Q8WTV0 552 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 C15orf40Q8WUR7 153 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 MOB3AQ96BX8 217 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 DGCR14Q96DF8 476 aaKnown RBP4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 DIRAS2Q96HU8 199 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 OR10C1Q96KK4 312 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 GINS3Q9BRX5 216 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 ZNF2Q9BSG1 426 aaPredicted RBP4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 QTRT1Q9BXR0 403 aaKnown RBP4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 TMEM14BQ9NUH8 114 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 TAS2R8Q9NYW2 309 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 RABL2AQ9UBK7 228 aaPredicted RBP4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 RABL2BQ9UNT1 228 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 X6R8D5 127 aa4.32□□□□□ -1.72
HMGN1P20-201ENST00000411849 PKHD1P08F94 4074 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 IGHV3-49A0A0A0MS15 119 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 ZNF701M0R085 212 aaPredicted RBP4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 UPK2O00526 184 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 CTDSPLO15194 276 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 RBFOX2O43251 390 aaKnown RBP eCLIP4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 TNFSF12O43508 249 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 NOL3O60936 208 aaKnown RBP4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 CD3DP04234 171 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 CTSGP08311 255 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 TRAPPC2P0DI81 140 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 TRAPPC2BP0DI82 140 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 NQO2P16083 231 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 TNFSF8P32971 234 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 UCP3P55916 312 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 FAM3BP58499 235 aaPredicted RBP4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 TAS2R31P59538 309 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 HERV-K104P61576 105 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 TSPAN5P62079 268 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 RPL11P62913 178 aaKnown RBP4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 MRPS10P82664 201 aaKnown RBP4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 SSBP1Q04837 148 aaKnown RBP4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 RNASE12Q5GAN4 147 aaKnown RBP4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 AADACL3Q5VUY0 350 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 FAM90A2PQ658T7 463 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 ZNF767PQ75MW2 155 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 TRPT1Q86TN4 253 aaKnown RBP4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 LHFPL1Q86WI0 220 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 TMEM17Q86X19 198 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 SPAG16Q8N0X2 631 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 TMEM229BQ8NBD8 167 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 DUSP18Q8NEJ0 188 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 OR10W1Q8NGF6 305 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 MCFD2Q8NI22 146 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 FCAMRQ8WWV6 532 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 BORCS5Q969J3 196 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 ZNF414Q96IQ9 312 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 C1QTNF4Q9BXJ3 329 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 FXYD6Q9H0Q3 95 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 MS4A6AQ9H2W1 248 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 RSL24D1Q9UHA3 163 aaKnown RBP4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 CELA1Q9UNI1 258 aa4.31□□□□□ -1.72
HMGN1P20-201ENST00000411849 IGHV3OR16-13A0A075B7E8 117 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 IGHV3-21A0A0B4J1V1 117 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 IGHV3-74A0A0B4J1X5 117 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 CCDC160A6NGH7 325 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 M0QYG6 137 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 GPR31O00270 319 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 ST8SIA3O43173 380 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 PGLYRP1O75594 196 aaPredicted RBP4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 HPRT1P00492 218 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 GIG44P09565 113 aaPredicted RBP4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 SPART-AS1P0CW21 52 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 C4BPBP20851 252 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 F2RP25116 425 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 TAS2R19P59542 299 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 WT1-ASQ06250 92 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 CATR1Q13166 79 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 IL18Q14116 193 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 POU2AF1Q16633 256 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 LPCAT3Q6P1A2 487 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 CADM3Q8N126 398 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 DMBX1Q8NFW5 382 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 OR4D10Q8NGI6 311 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 SMIM4Q8WVI0 70 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 LSM10Q969L4 123 aaKnown RBP4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 GRAMD2BQ96HH9 432 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 TXN2Q99757 166 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 SCRT1Q9BWW7 348 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 TMEM231Q9H6L2 316 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 RABAC1Q9UI14 185 aa4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 F11RQ9Y624 299 aaKnown RBP4.3□□□□□ -1.72
HMGN1P20-201ENST00000411849 TRAV3A0A0B4J244 114 aa4.29□□□□□ -1.72
HMGN1P20-201ENST00000411849 TEX50A0A1B0GTY4 177 aa4.29□□□□□ -1.72
HMGN1P20-201ENST00000411849 TEX48A0A1B0GUV7 120 aa4.29□□□□□ -1.72
HMGN1P20-201ENST00000411849 ANKRD20A5PA0PJZ0 165 aa4.29□□□□□ -1.72
HMGN1P20-201ENST00000411849 TMEM189A5PLL7 270 aa4.29□□□□□ -1.72
HMGN1P20-201ENST00000411849 FABP12A6NFH5 140 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms