RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 GCM2O75603 506 aaPredicted RBP7.04□□□□□ -1.28
SCN9A-203ENST00000409672 SCN10AQ9Y5Y9 1956 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 FAM19A2Q8N3H0 131 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 ZNF414Q96IQ9 312 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 A0A0G2JNJ9 132 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 CD300LDQ6UXZ3 194 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 TMEM91Q6ZNR0 172 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 FER1L6-AS1Q8NA97 138 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 BPESC1Q9GZL8 116 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 MIXL1Q9H2W2 232 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 Q9UFV3 132 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 RAMP3O60896 148 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 CA1P00915 261 aaPredicted RBP7.04□□□□□ -1.28
SCN9A-203ENST00000409672 CD55P08174 381 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 MIR17HGQ75NE6 70 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 ALX4Q9H161 411 aaPredicted RBP7.04□□□□□ -1.28
SCN9A-203ENST00000409672 ZMAT4Q9H898 229 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 SAA2-SAA4A0A096LPE2 208 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 IGKV1D-43A0A0B4J1Z2 117 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 SMIM13P0DJ93 91 aa7.04□□□□□ -1.28
SCN9A-203ENST00000409672 SAA2P0DJI9 122 aaPredicted RBP7.04□□□□□ -1.28
SCN9A-203ENST00000409672 USF3Q68DE3 2245 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 IGHV1-18A0A0C4DH31 117 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 LINC00614P0C842 121 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 H1FOOQ8IZA3 346 aaPredicted RBP7.03□□□□□ -1.28
SCN9A-203ENST00000409672 AQP3Q92482 292 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 ST20Q9HBF5 79 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 COL18A1P39060 1754 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 VKORC1Q9BQB6 163 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 TNFSF18Q9UNG2 199 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 C2orf16Q68DN1 1984 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 FAM74A7A6NL05 159 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 EREGO14944 169 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 TMEM8BA6NDV4 472 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 OR52E5Q8NH55 327 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 AICDAQ9GZX7 198 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 LAMTOR3Q9UHA4 124 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 NOTCH3Q9UM47 2321 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 KBTBD11-OT1A0A1B0GTJ5 212 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 NPIPB13A6NJU9 1138 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 NPIPB5A8MRT5 1133 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 GCHFRP30047 84 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 COL25A1Q9BXS0 654 aaPredicted RBP7.03□□□□□ -1.28
SCN9A-203ENST00000409672 PKIBQ9C010 78 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 PAX4O43316 350 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 SELLP14151 372 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 IFI27P40305 119 aaPredicted RBP7.03□□□□□ -1.28
SCN9A-203ENST00000409672 KLF17Q5JT82 389 aaPredicted RBP7.03□□□□□ -1.28
SCN9A-203ENST00000409672 WDFY2Q96P53 400 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 FOLR2P14207 255 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 AGAP20933 346 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 NRIP2Q9BQI9 281 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 SSBP4Q9BWG4 385 aaPredicted RBP7.03□□□□□ -1.28
SCN9A-203ENST00000409672 SURF2Q15527 256 aaPredicted RBP7.03□□□□□ -1.28
SCN9A-203ENST00000409672 FAM209AQ5JX71 171 aa7.03□□□□□ -1.28
SCN9A-203ENST00000409672 P2RY4P51582 365 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 C1orf122Q6ZSJ8 110 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 RNASE7Q9H1E1 156 aaKnown RBP7.02□□□□□ -1.29
SCN9A-203ENST00000409672 DMRT1Q9Y5R6 373 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 LCTP09848 1927 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 ACACAQ13085 2346 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 C12orf77C9JDV5 145 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 TCF23Q7RTU1 214 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 MARVELD1Q9BSK0 173 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 DLX4Q92988 240 aaPredicted RBP7.02□□□□□ -1.29
SCN9A-203ENST00000409672 J3QKU1 62 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 HMSDA8MTL9 139 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 MEF2BQ02080 365 aaPredicted RBP7.02□□□□□ -1.29
SCN9A-203ENST00000409672 SLC25A15Q9Y619 301 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 KIF26AQ9ULI4 1882 aaPredicted RBP7.02□□□□□ -1.29
SCN9A-203ENST00000409672 HMGA2P52926 109 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 SYNJ2BPP57105 145 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 FUT5Q11128 374 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 V9GYH0 126 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 TRAV41A0A0B4J266 112 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 C15orf32Q32M92 178 aa7.02□□□□□ -1.29
SCN9A-203ENST00000409672 CTDSPLO15194 276 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 HIST1H4AP62805 103 aaKnown RBP7.01□□□□□ -1.29
SCN9A-203ENST00000409672 SBF2Q86WG5 1849 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 A0A0G2JK05 382 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 PRSS23O95084 383 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 SCAND1P57086 179 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 COQ2Q96H96 371 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 A0A1W2PR77 199 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 SERF2P84101 59 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 IFI27L2Q9H2X8 130 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 OR11H12B2RN74 326 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 PYYP10082 97 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 CD59P13987 128 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 LINC01356Q8N9X3 169 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 OR11H1Q8NG94 326 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 OR11H2Q8NH07 326 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 WDR81Q562E7 1941 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 TMEM133Q9H2Q1 129 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 XCL2Q9UBD3 114 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 IGLV1-36A0A0B4J1U3 117 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 PAX1P15863 534 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 ATP5G3P48201 142 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 PAPPA-AS1Q5QFB9 102 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 Q9HAA7 133 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms