RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 MCUBQ9NWR8 336 aa14.6□□□□□ -0.07
TSPAN4-209ENST00000409543 CACNG5Q9UF02 275 aa14.6□□□□□ -0.07
TSPAN4-209ENST00000409543 TOMM20LQ6UXN7 152 aa14.59□□□□□ -0.07
TSPAN4-209ENST00000409543 ZNF600Q6ZNG1 722 aa14.59□□□□□ -0.07
TSPAN4-209ENST00000409543 GINS3Q9BRX5 216 aa14.59□□□□□ -0.07
TSPAN4-209ENST00000409543 UBQLN2Q9UHD9 624 aa14.59□□□□□ -0.07
TSPAN4-209ENST00000409543 IGHV3-49A0A0A0MS15 119 aa14.58□□□□□ -0.08
TSPAN4-209ENST00000409543 HTR2BP41595 481 aa14.58□□□□□ -0.08
TSPAN4-209ENST00000409543 TMEM187Q14656 261 aa14.58□□□□□ -0.08
TSPAN4-209ENST00000409543 ODF3L2Q3SX64 289 aa14.58□□□□□ -0.08
TSPAN4-209ENST00000409543 FNDC4Q9H6D8 234 aaPredicted RBP14.58□□□□□ -0.08
TSPAN4-209ENST00000409543 CACFD1Q9UGQ2 172 aa14.58□□□□□ -0.08
TSPAN4-209ENST00000409543 CCDC160A6NGH7 325 aa14.57□□□□□ -0.08
TSPAN4-209ENST00000409543 CLN5O75503 358 aa14.57□□□□□ -0.08
TSPAN4-209ENST00000409543 BMI1P35226 326 aa14.57□□□□□ -0.08
TSPAN4-209ENST00000409543 FAUP35544 74 aaKnown RBP14.57□□□□□ -0.08
TSPAN4-209ENST00000409543 OPRK1P41145 380 aa14.57□□□□□ -0.08
TSPAN4-209ENST00000409543 MLANAQ16655 118 aa14.57□□□□□ -0.08
TSPAN4-209ENST00000409543 FAM90A2PQ658T7 463 aa14.57□□□□□ -0.08
TSPAN4-209ENST00000409543 OR4X1Q8NH49 305 aa14.57□□□□□ -0.08
TSPAN4-209ENST00000409543 HEYLQ9NQ87 328 aaPredicted RBP14.57□□□□□ -0.08
TSPAN4-209ENST00000409543 MRPL36Q9P0J6 103 aaKnown RBP14.57□□□□□ -0.08
TSPAN4-209ENST00000409543 PUS1Q9Y606 427 aaKnown RBP eCLIP14.57□□□□□ -0.08
TSPAN4-209ENST00000409543 DYNC2H1Q8NCM8 4307 aaKnown RBP14.56□□□□□ -0.08
TSPAN4-209ENST00000409543 CD5P06127 495 aa14.56□□□□□ -0.08
TSPAN4-209ENST00000409543 AKR1C4P17516 323 aa14.56□□□□□ -0.08
TSPAN4-209ENST00000409543 CMC4P56277 68 aaPredicted RBP14.56□□□□□ -0.08
TSPAN4-209ENST00000409543 KLF9Q13886 244 aaPredicted RBP14.56□□□□□ -0.08
TSPAN4-209ENST00000409543 C2orf83Q53S99 150 aa14.56□□□□□ -0.08
TSPAN4-209ENST00000409543 PYDC2Q56P42 97 aa14.56□□□□□ -0.08
TSPAN4-209ENST00000409543 IL17DQ8TAD2 202 aa14.56□□□□□ -0.08
TSPAN4-209ENST00000409543 TRIM63Q969Q1 353 aa14.56□□□□□ -0.08
TSPAN4-209ENST00000409543 ZFAND3Q9H8U3 227 aa14.56□□□□□ -0.08
TSPAN4-209ENST00000409543 V9GYH0 126 aa14.56□□□□□ -0.08
TSPAN4-209ENST00000409543 IGHV3OR16-13A0A075B7E8 117 aa14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 IGHV3-74A0A0B4J1X5 117 aa14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 A0A1B0GU03 582 aa14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 RPS10-NUDT3A0A1W2PQS6 291 aa14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 CEBPZOSA8MTT3 80 aa14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 SCGB2A1O75556 95 aa14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 SULT1A3P0DMM9 295 aa14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 SULT1A4P0DMN0 295 aa14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 S100A5P33763 92 aa14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 APOC4P55056 127 aa14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 AP3S2P59780 193 aa14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 SUPT4H1P63272 117 aaKnown RBP14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 NMSQ5H8A3 153 aa14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 OVOL2Q9BRP0 275 aa14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 RBM38Q9H0Z9 239 aaKnown RBP14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 VSIRQ9H7M9 311 aa14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 PRR13Q9NZ81 148 aa14.55□□□□□ -0.08
TSPAN4-209ENST00000409543 TRAV30A0A087WSZ9 112 aa14.54□□□□□ -0.08
TSPAN4-209ENST00000409543 A0A0B4J2A0 478 aa14.54□□□□□ -0.08
TSPAN4-209ENST00000409543 UBE2CO00762 179 aa14.54□□□□□ -0.08
TSPAN4-209ENST00000409543 ANXA3P12429 323 aa14.54□□□□□ -0.08
TSPAN4-209ENST00000409543 Q6ZWC4 215 aa14.54□□□□□ -0.08
TSPAN4-209ENST00000409543 TCF24Q7RTU0 167 aa14.54□□□□□ -0.08
TSPAN4-209ENST00000409543 TOMM5Q8N4H5 51 aa14.54□□□□□ -0.08
TSPAN4-209ENST00000409543 SLC24A4Q8NFF2 622 aa14.54□□□□□ -0.08
TSPAN4-209ENST00000409543 RNASEH2CQ8TDP1 164 aaKnown RBP14.54□□□□□ -0.08
TSPAN4-209ENST00000409543 ST8SIA2Q92186 375 aa14.54□□□□□ -0.08
TSPAN4-209ENST00000409543 SHPKQ9UHJ6 478 aa14.54□□□□□ -0.08
TSPAN4-209ENST00000409543 TENM2Q9NT68 2774 aa14.54□□□□□ -0.08
TSPAN4-209ENST00000409543 KIR2DL5BA0A0G2JN68 375 aa14.53□□□□□ -0.08
TSPAN4-209ENST00000409543 KIR2DL5BA0A0G2JPC4 375 aa14.53□□□□□ -0.08
TSPAN4-209ENST00000409543 ZNF701M0R085 212 aaPredicted RBP14.53□□□□□ -0.08
TSPAN4-209ENST00000409543 APOHP02749 345 aaPredicted RBP14.53□□□□□ -0.08
TSPAN4-209ENST00000409543 TFPI2P48307 235 aa14.53□□□□□ -0.08
TSPAN4-209ENST00000409543 CCR6P51684 374 aa14.53□□□□□ -0.08
TSPAN4-209ENST00000409543 PAFAH1B2P68402 229 aa14.53□□□□□ -0.08
TSPAN4-209ENST00000409543 SRPXP78539 464 aa14.53□□□□□ -0.08
TSPAN4-209ENST00000409543 ZNF79Q15937 498 aa14.53□□□□□ -0.08
TSPAN4-209ENST00000409543 LYZL2Q7Z4W2 148 aa14.53□□□□□ -0.08
TSPAN4-209ENST00000409543 KIR2DL5AQ8N109 375 aa14.53□□□□□ -0.08
TSPAN4-209ENST00000409543 LGI3Q8N145 548 aa14.53□□□□□ -0.08
TSPAN4-209ENST00000409543 KIR2DL5BQ8NHK3 375 aa14.53□□□□□ -0.08
TSPAN4-209ENST00000409543 DEDD2Q8WXF8 326 aa14.53□□□□□ -0.08
TSPAN4-209ENST00000409543 TP53TG1Q9Y2A0 90 aa14.53□□□□□ -0.08
TSPAN4-209ENST00000409543 IGKV3-7A0A075B6H7 116 aa14.52□□□□□ -0.09
TSPAN4-209ENST00000409543 PIGBOS1A0A0B4J2F0 54 aa14.52□□□□□ -0.09
TSPAN4-209ENST00000409543 IGKV1-17P01599 117 aa14.52□□□□□ -0.09
TSPAN4-209ENST00000409543 SLC25A4P12235 298 aa14.52□□□□□ -0.09
TSPAN4-209ENST00000409543 NPPCP23582 126 aa14.52□□□□□ -0.09
TSPAN4-209ENST00000409543 SMCO1Q147U7 214 aa14.52□□□□□ -0.09
TSPAN4-209ENST00000409543 CCDC190Q86UF4 302 aa14.52□□□□□ -0.09
TSPAN4-209ENST00000409543 NOXA1Q86UR1 476 aa14.52□□□□□ -0.09
TSPAN4-209ENST00000409543 LILRB2Q8N423 598 aa14.52□□□□□ -0.09
TSPAN4-209ENST00000409543 TMEM231Q9H6L2 316 aa14.52□□□□□ -0.09
TSPAN4-209ENST00000409543 CSMD3Q7Z407 3707 aa14.52□□□□□ -0.09
TSPAN4-209ENST00000409543 NXPH3O95157 252 aa14.51□□□□□ -0.09
TSPAN4-209ENST00000409543 TNFRSF9Q07011 255 aa14.51□□□□□ -0.09
TSPAN4-209ENST00000409543 PRSS54Q6PEW0 395 aa14.51□□□□□ -0.09
TSPAN4-209ENST00000409543 WFDC3Q8IUB2 231 aa14.51□□□□□ -0.09
TSPAN4-209ENST00000409543 APRG1Q8IVJ8 170 aa14.51□□□□□ -0.09
TSPAN4-209ENST00000409543 GBGT1Q8N5D6 347 aa14.51□□□□□ -0.09
TSPAN4-209ENST00000409543 STPG3Q8N7X2 389 aa14.51□□□□□ -0.09
TSPAN4-209ENST00000409543 TMEM170AQ8WVE7 144 aa14.51□□□□□ -0.09
TSPAN4-209ENST00000409543 SLC25A21Q9BQT8 299 aaPredicted RBP14.51□□□□□ -0.09
TSPAN4-209ENST00000409543 HSPB7Q9UBY9 170 aa14.51□□□□□ -0.09
TSPAN4-209ENST00000409543 STARD9Q9P2P6 4700 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms