RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 TBX15Q96SF7 602 aa10.97□□□□□ -0.65
COL6A2-204ENST00000409416 PPIAL4EA0A075B759 164 aa10.96□□□□□ -0.65
COL6A2-204ENST00000409416 A8MXE2 369 aa10.96□□□□□ -0.65
COL6A2-204ENST00000409416 PPIAL4DF5H284 164 aa10.96□□□□□ -0.65
COL6A2-204ENST00000409416 C15orf65H3BRN8 121 aa10.96□□□□□ -0.65
COL6A2-204ENST00000409416 GFRA3O60609 400 aa10.96□□□□□ -0.65
COL6A2-204ENST00000409416 VENTXO95231 258 aa10.96□□□□□ -0.65
COL6A2-204ENST00000409416 PPIAL4FP0DN26 164 aa10.96□□□□□ -0.65
COL6A2-204ENST00000409416 GCHFRP30047 84 aa10.96□□□□□ -0.65
COL6A2-204ENST00000409416 OR1L6Q8NGR2 347 aa10.96□□□□□ -0.65
COL6A2-204ENST00000409416 OR5R1Q8NH85 324 aa10.96□□□□□ -0.65
COL6A2-204ENST00000409416 NPVFQ9HCQ7 196 aa10.96□□□□□ -0.65
COL6A2-204ENST00000409416 NACAE9PAV3 2078 aa10.96□□□□□ -0.65
COL6A2-204ENST00000409416 IGKV3-7A0A075B6H7 116 aa10.96□□□□□ -0.66
COL6A2-204ENST00000409416 SRRM5B3KS81 715 aa10.96□□□□□ -0.66
COL6A2-204ENST00000409416 GGCTO75223 188 aaKnown RBP10.96□□□□□ -0.66
COL6A2-204ENST00000409416 FRMD6-AS1P0C7T7 363 aa10.96□□□□□ -0.66
COL6A2-204ENST00000409416 TIMP3P35625 211 aa10.96□□□□□ -0.66
COL6A2-204ENST00000409416 RHOBP62745 196 aa10.96□□□□□ -0.66
COL6A2-204ENST00000409416 MZT1Q08AG7 82 aa10.96□□□□□ -0.66
COL6A2-204ENST00000409416 OR8I2Q8N0Y5 310 aa10.96□□□□□ -0.66
COL6A2-204ENST00000409416 PLSCR4Q9NRQ2 329 aa10.96□□□□□ -0.66
COL6A2-204ENST00000409416 TPSG1Q9NRR2 321 aa10.96□□□□□ -0.66
COL6A2-204ENST00000409416 hADV38S2A0JD32 116 aa10.96□□□□□ -0.66
COL6A2-204ENST00000409416 J3QW42 95 aa10.96□□□□□ -0.66
COL6A2-204ENST00000409416 TNFRSF1AP19438 455 aa10.96□□□□□ -0.66
COL6A2-204ENST00000409416 CNTFRP26992 372 aa10.96□□□□□ -0.66
COL6A2-204ENST00000409416 CRYBG3Q68DQ2 2970 aa10.96□□□□□ -0.66
COL6A2-204ENST00000409416 PQLC2Q6ZP29 291 aa10.96□□□□□ -0.66
COL6A2-204ENST00000409416 CENPVQ7Z7K6 275 aaPredicted RBP10.96□□□□□ -0.66
COL6A2-204ENST00000409416 RNASE7Q9H1E1 156 aaKnown RBP10.96□□□□□ -0.66
COL6A2-204ENST00000409416 TMSB15BA0A087X1C1 80 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 SH2D7A6NKC9 451 aaPredicted RBP10.95□□□□□ -0.66
COL6A2-204ENST00000409416 SNURFLB1AK76 121 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 CRISP2P16562 243 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 KRTDAPP60985 99 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 UBE2L3P68036 154 aaKnown RBP10.95□□□□□ -0.66
COL6A2-204ENST00000409416 RELBQ01201 579 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 EFNB3Q15768 340 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 LRRC10Q5BKY1 277 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 TRAT1Q6PIZ9 186 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 ZNF462Q96JM2 2506 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 IGHV3-49A0A0A0MS15 119 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 SRRM4A7MD48 611 aaKnown RBP10.95□□□□□ -0.66
COL6A2-204ENST00000409416 MT-CO2P00403 227 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 SAA1P0DJI8 122 aaPredicted RBP10.95□□□□□ -0.66
COL6A2-204ENST00000409416 ZNF137PP52743 207 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 TIMM23BQ5SRD1 257 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 TEX38Q6PEX7 206 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 PYGO2Q9BRQ0 406 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 SSUH2Q9Y2M2 353 aa10.95□□□□□ -0.66
COL6A2-204ENST00000409416 COX7A2P2O60397 106 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 GCGP01275 180 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 GNG5P63218 68 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 PNKDQ8N490 385 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 VN1R17PQ8TDU5 208 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 FLYWCH2Q96CP2 140 aaKnown RBP10.94□□□□□ -0.66
COL6A2-204ENST00000409416 SLC35E1Q96K37 410 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 MRPL18Q9H0U6 180 aaKnown RBP10.94□□□□□ -0.66
COL6A2-204ENST00000409416 IFI27L2Q9H2X8 130 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 NAT8BQ9UHF3 227 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 JPT1Q9UK76 154 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 CEACAM8P31997 349 aaPredicted RBP10.94□□□□□ -0.66
COL6A2-204ENST00000409416 GNG4P50150 75 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 LYZP61626 148 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 EIF4EBP1Q13541 118 aaPredicted RBP10.94□□□□□ -0.66
COL6A2-204ENST00000409416 GBGT1Q8N5D6 347 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 HSPB9Q9BQS6 159 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 NAGKQ9UJ70 344 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 CDKN1AP38936 164 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 SPACA3Q8IXA5 215 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 ATOH7Q8N100 152 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 ZNF714Q96N38 554 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 FBXL15Q9H469 300 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 ELOVL5Q9NYP7 299 aa10.94□□□□□ -0.66
COL6A2-204ENST00000409416 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.93□□□□□ -0.66
COL6A2-204ENST00000409416 STAG3L2P0CL84 134 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 STAG3L3P0CL85 134 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 SSBP2P81877 361 aaPredicted RBP10.93□□□□□ -0.66
COL6A2-204ENST00000409416 OR4C5Q8NGB2 326 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 FLNCQ14315 2725 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 DCHS2Q6V1P9 2916 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 KBTBD11-OT1A0A1B0GTJ5 212 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 F2Z2F3 143 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 J3KRW8 73 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 LINC00869P0C866 280 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 TCF15Q12870 199 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 TET2Q6N021 2002 aaPredicted RBP10.93□□□□□ -0.66
COL6A2-204ENST00000409416 JMJD1CQ15652 2540 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 MPDU1O75352 247 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 SERF1AO75920 110 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 IGHG3P01860 377 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 CCKARP32238 428 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 ERHP84090 104 aaKnown RBP10.93□□□□□ -0.66
COL6A2-204ENST00000409416 KLRD1Q13241 179 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 CENPWQ5EE01 88 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 TCTEX1D1Q8N7M0 179 aa10.93□□□□□ -0.66
COL6A2-204ENST00000409416 HELTA6NFD8 242 aa10.92□□□□□ -0.66
COL6A2-204ENST00000409416 NDUFS7O75251 213 aa10.92□□□□□ -0.66
COL6A2-204ENST00000409416 VDAC2P45880 294 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms