RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 IGLL1P15814 213 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 IL11P20809 199 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 GNG4P50150 75 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 ZNF121P58317 390 aaPredicted RBP4.48□□□□□ -1.69
CLK1-202ENST00000409403 CX3CL1P78423 397 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 FUT7Q11130 342 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 KLF5Q13887 457 aaPredicted RBP4.48□□□□□ -1.69
CLK1-202ENST00000409403 MUC21Q5SSG8 566 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 Q6ZSR3 168 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 Q71RC1 249 aaPredicted RBP4.48□□□□□ -1.69
CLK1-202ENST00000409403 MRPL21Q7Z2W9 205 aaKnown RBP4.48□□□□□ -1.69
CLK1-202ENST00000409403 S100A7AQ86SG5 101 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 MMD2Q8IY49 270 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 OR11H1Q8NG94 326 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 OR2K2Q8NGT1 345 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 OR11H2Q8NH07 326 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 OR4C3Q8NH37 302 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 TSKUQ8WUA8 353 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 SPACA9Q96E40 222 aaPredicted RBP4.48□□□□□ -1.69
CLK1-202ENST00000409403 DERL1Q9BUN8 251 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 CLEC7AQ9BXN2 247 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 ZNF71Q9NQZ8 489 aaPredicted RBP4.48□□□□□ -1.69
CLK1-202ENST00000409403 SPANXA1Q9NS26 97 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 FGF21Q9NSA1 209 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 COPS7AQ9UBW8 275 aa4.48□□□□□ -1.69
CLK1-202ENST00000409403 PPIAL4EA0A075B759 164 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 TMED7-TICAM2A0A0A6YYA0 188 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 PPIAL4CA0A0B4J2A2 164 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 TMEM189A5PLL7 270 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 PPIAL4DF5H284 164 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 K7EQM0 130 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 CRXO43186 299 aaPredicted RBP4.47□□□□□ -1.69
CLK1-202ENST00000409403 SPRY3O43610 288 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 MPDU1O75352 247 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 APCSP02743 223 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 CRYGCP07315 174 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 OR5AL1P0C617 328 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 PPIAL4FP0DN26 164 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 NTF3P20783 257 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 SRIP30626 198 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 GPR183P32249 361 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 PPOXP50336 477 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 DUSP3P51452 185 aaPredicted RBP4.47□□□□□ -1.69
CLK1-202ENST00000409403 FUT6P51993 359 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 CRYBA4P53673 196 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 RPS18P62269 152 aaKnown RBP4.47□□□□□ -1.69
CLK1-202ENST00000409403 GNB1P62873 340 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 IGLV3-21P80748 117 aaPredicted RBP4.47□□□□□ -1.69
CLK1-202ENST00000409403 POM121L1PQ3SYA9 428 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 Q56UQ5 140 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 FIGLAQ6QHK4 219 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 BPIFA4PQ86YQ2 179 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 ST6GALNAC3Q8NDV1 305 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 STXBP6Q8NFX7 210 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 VSTM2AQ8TAG5 236 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 C18orf32Q8TCD1 76 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 C11orf52Q96A22 123 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 OR4C12Q96R67 309 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 LIME1Q9H400 295 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 OSTCQ9NRP0 149 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 ERRFI1Q9UJM3 462 aaPredicted RBP4.47□□□□□ -1.69
CLK1-202ENST00000409403 PILRAQ9UKJ1 303 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 TRAPPC2LQ9UL33 140 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 TRPM6Q9BX84 2022 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 MEGF8Q7Z7M0 2845 aa4.47□□□□□ -1.69
CLK1-202ENST00000409403 TRAV8-6A0A0B4J262 113 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 IGHV1OR15-9A0A0B4J2B8 117 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 IGKV1-9A0A0C4DH69 117 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 A0A1W2PPV4 95 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 FRG2CA6NGY1 282 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 DNAJC9-AS1A6NH13 148 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 OR4C46A6NHA9 309 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 ANKRD30BLA7E2S9 258 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 ANGPTL7O43827 346 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 ZIC3O60481 467 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 RHBDL1O75783 438 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 CXorf1O96002 111 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 IGLV3-1P01715 115 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 IGHG1P01857 330 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 HIST1H1EP10412 219 aaKnown RBP4.46□□□□□ -1.7
CLK1-202ENST00000409403 FABP2P12104 132 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 USF1P22415 310 aaPredicted RBP4.46□□□□□ -1.7
CLK1-202ENST00000409403 F2RP25116 425 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 HTR1DP28221 377 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 IL12BP29460 328 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 CYB561P49447 251 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 MRPS21P82921 87 aaKnown RBP4.46□□□□□ -1.7
CLK1-202ENST00000409403 PSG4Q00888 419 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 SLAQ13239 276 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 TWIST1Q15672 202 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 PSMG4Q5JS54 123 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 TMEM136Q6ZRR5 245 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 TMEM25Q86YD3 366 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 OR8I2Q8N0Y5 310 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 OSR2Q8N2R0 312 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 GATSQ8NAP1 163 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 OR2M3Q8NG83 312 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 OR10AG1Q8NH19 301 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 C5orf30Q96GV9 206 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 ZNF479Q96JC4 524 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms