RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 LGALS9O00182 355 aa15.49■□□□□ 0.07
PTCD3-202ENST00000409326 SPNP16150 400 aa15.49■□□□□ 0.07
PTCD3-202ENST00000409326 CHRDL1Q9BU40 450 aa15.49■□□□□ 0.07
PTCD3-202ENST00000409326 PEMTQ9UBM1 199 aa15.49■□□□□ 0.07
PTCD3-202ENST00000409326 MEGF8Q7Z7M0 2845 aa15.49■□□□□ 0.07
PTCD3-202ENST00000409326 RPS10-NUDT3A0A1W2PQS6 291 aa15.48■□□□□ 0.07
PTCD3-202ENST00000409326 LY86O95711 162 aa15.48■□□□□ 0.07
PTCD3-202ENST00000409326 ADMP35318 185 aa15.48■□□□□ 0.07
PTCD3-202ENST00000409326 NPBWR1P48145 328 aa15.48■□□□□ 0.07
PTCD3-202ENST00000409326 FAM106AQ4KMX7 169 aa15.48■□□□□ 0.07
PTCD3-202ENST00000409326 IL34Q6ZMJ4 242 aa15.48■□□□□ 0.07
PTCD3-202ENST00000409326 OR4C12Q96R67 309 aa15.48■□□□□ 0.07
PTCD3-202ENST00000409326 ZNF436Q9C0F3 470 aaPredicted RBP15.48■□□□□ 0.07
PTCD3-202ENST00000409326 SORL1Q92673 2214 aa15.47■□□□□ 0.07
PTCD3-202ENST00000409326 FAM25EA8MYX2 175 aa15.47■□□□□ 0.07
PTCD3-202ENST00000409326 WRBO00258 174 aa15.47■□□□□ 0.07
PTCD3-202ENST00000409326 NUPL2O15504 423 aaKnown RBP15.47■□□□□ 0.07
PTCD3-202ENST00000409326 GNG7O60262 68 aa15.47■□□□□ 0.07
PTCD3-202ENST00000409326 CTSGP08311 255 aa15.47■□□□□ 0.07
PTCD3-202ENST00000409326 POLR2GP62487 172 aaKnown RBP eCLIP15.47■□□□□ 0.07
PTCD3-202ENST00000409326 SIGLEC8Q9NYZ4 499 aa15.47■□□□□ 0.07
PTCD3-202ENST00000409326 GSKIPQ9P0R6 139 aa15.47■□□□□ 0.07
PTCD3-202ENST00000409326 IGHV3-35A0A0C4DH35 117 aa15.46■□□□□ 0.07
PTCD3-202ENST00000409326 C5orf51A6NDU8 294 aa15.46■□□□□ 0.07
PTCD3-202ENST00000409326 C15orf62A8K5M9 175 aa15.46■□□□□ 0.07
PTCD3-202ENST00000409326 A8MWP6 167 aa15.46■□□□□ 0.07
PTCD3-202ENST00000409326 SCGB1D2O95969 90 aa15.46■□□□□ 0.07
PTCD3-202ENST00000409326 CSN3P07498 182 aa15.46■□□□□ 0.07
PTCD3-202ENST00000409326 KRTAP10-11P60412 298 aa15.46■□□□□ 0.07
PTCD3-202ENST00000409326 RPP30P78346 268 aaKnown RBP15.46■□□□□ 0.07
PTCD3-202ENST00000409326 DEFA6Q01524 100 aa15.46■□□□□ 0.07
PTCD3-202ENST00000409326 MLANAQ16655 118 aa15.46■□□□□ 0.07
PTCD3-202ENST00000409326 ETFRF1Q6IPR1 90 aa15.46■□□□□ 0.07
PTCD3-202ENST00000409326 OR4X1Q8NH49 305 aa15.46■□□□□ 0.07
PTCD3-202ENST00000409326 MRPL36Q9P0J6 103 aaKnown RBP15.46■□□□□ 0.07
PTCD3-202ENST00000409326 ZMAT5Q9UDW3 170 aaKnown RBP15.46■□□□□ 0.07
PTCD3-202ENST00000409326 SSSCA1O60232 199 aa15.45■□□□□ 0.06
PTCD3-202ENST00000409326 CLN5O75503 358 aa15.45■□□□□ 0.06
PTCD3-202ENST00000409326 IFNA4P05014 189 aa15.45■□□□□ 0.06
PTCD3-202ENST00000409326 SLC25A4P12235 298 aa15.45■□□□□ 0.06
PTCD3-202ENST00000409326 RAB11AP62491 216 aa15.45■□□□□ 0.06
PTCD3-202ENST00000409326 RELQ04864 619 aaPredicted RBP15.45■□□□□ 0.06
PTCD3-202ENST00000409326 DCTN2Q13561 401 aaKnown RBP15.45■□□□□ 0.06
PTCD3-202ENST00000409326 UNQ9165/PRO28630Q6UXU0 137 aa15.45■□□□□ 0.06
PTCD3-202ENST00000409326 GSG1LQ6UXU4 331 aa15.45■□□□□ 0.06
PTCD3-202ENST00000409326 TMEM190Q8WZ59 177 aa15.45■□□□□ 0.06
PTCD3-202ENST00000409326 C2orf50Q96LR7 162 aa15.45■□□□□ 0.06
PTCD3-202ENST00000409326 ZNF320A2RRD8 509 aa15.44■□□□□ 0.06
PTCD3-202ENST00000409326 C2orf70A6NJV1 201 aa15.44■□□□□ 0.06
PTCD3-202ENST00000409326 NDUFA4O00483 81 aa15.44■□□□□ 0.06
PTCD3-202ENST00000409326 CD69Q07108 199 aa15.44■□□□□ 0.06
PTCD3-202ENST00000409326 PRSS54Q6PEW0 395 aa15.44■□□□□ 0.06
PTCD3-202ENST00000409326 ZNF414Q96IQ9 312 aa15.44■□□□□ 0.06
PTCD3-202ENST00000409326 RCL1Q9Y2P8 373 aaKnown RBP15.44■□□□□ 0.06
PTCD3-202ENST00000409326 TMEM213A2RRL7 107 aa15.43■□□□□ 0.06
PTCD3-202ENST00000409326 TMEM50AO95807 157 aa15.43■□□□□ 0.06
PTCD3-202ENST00000409326 IGLV1-51P01701 117 aa15.43■□□□□ 0.06
PTCD3-202ENST00000409326 MBPP02686 304 aaPredicted RBP15.43■□□□□ 0.06
PTCD3-202ENST00000409326 SPANXN5Q5MJ07 72 aa15.43■□□□□ 0.06
PTCD3-202ENST00000409326 SLC16A13Q7RTY0 426 aa15.43■□□□□ 0.06
PTCD3-202ENST00000409326 TMEM116Q8NCL8 245 aa15.43■□□□□ 0.06
PTCD3-202ENST00000409326 AURKAIP1Q9NWT8 199 aaPredicted RBP15.43■□□□□ 0.06
PTCD3-202ENST00000409326 UFC1Q9Y3C8 167 aa15.43■□□□□ 0.06
PTCD3-202ENST00000409326 C7orf66A4D0T2 115 aa15.42■□□□□ 0.06
PTCD3-202ENST00000409326 H3BP45 60 aa15.42■□□□□ 0.06
PTCD3-202ENST00000409326 SCGB2A1O75556 95 aa15.42■□□□□ 0.06
PTCD3-202ENST00000409326 RND2P52198 227 aa15.42■□□□□ 0.06
PTCD3-202ENST00000409326 ELLP55199 621 aaPredicted RBP15.42■□□□□ 0.06
PTCD3-202ENST00000409326 ADAMTSL5Q6ZMM2 481 aa15.42■□□□□ 0.06
PTCD3-202ENST00000409326 SMIM8Q96KF7 97 aa15.42■□□□□ 0.06
PTCD3-202ENST00000409326 RAB40CQ96S21 281 aa15.42■□□□□ 0.06
PTCD3-202ENST00000409326 PSENENQ9NZ42 101 aa15.42■□□□□ 0.06
PTCD3-202ENST00000409326 PAIP2BQ9ULR5 123 aaKnown RBP15.42■□□□□ 0.06
PTCD3-202ENST00000409326 STRAPQ9Y3F4 350 aaKnown RBP15.42■□□□□ 0.06
PTCD3-202ENST00000409326 TRAV30A0A087WSZ9 112 aa15.41■□□□□ 0.06
PTCD3-202ENST00000409326 GOSR2O14653 212 aa15.41■□□□□ 0.06
PTCD3-202ENST00000409326 PRB2P02812 416 aaPredicted RBP15.41■□□□□ 0.06
PTCD3-202ENST00000409326 FOLR2P14207 255 aa15.41■□□□□ 0.06
PTCD3-202ENST00000409326 EDN2P20800 178 aa15.41■□□□□ 0.06
PTCD3-202ENST00000409326 GPX4P36969 197 aaPredicted RBP15.41■□□□□ 0.06
PTCD3-202ENST00000409326 PAX9P55771 341 aa15.41■□□□□ 0.06
PTCD3-202ENST00000409326 TAS2R30P59541 319 aa15.41■□□□□ 0.06
PTCD3-202ENST00000409326 IL15RAQ13261 267 aa15.41■□□□□ 0.06
PTCD3-202ENST00000409326 HAPLN4Q86UW8 402 aa15.41■□□□□ 0.06
PTCD3-202ENST00000409326 CACNG8Q8WXS5 425 aa15.41■□□□□ 0.06
PTCD3-202ENST00000409326 PRSS46E5RG02 174 aa15.4■□□□□ 0.06
PTCD3-202ENST00000409326 K7EPK0 472 aa15.4■□□□□ 0.06
PTCD3-202ENST00000409326 CBLN1P23435 193 aa15.4■□□□□ 0.06
PTCD3-202ENST00000409326 RGS21Q2M5E4 152 aa15.4■□□□□ 0.06
PTCD3-202ENST00000409326 TM4SF20Q53R12 229 aa15.4■□□□□ 0.06
PTCD3-202ENST00000409326 ZNF600Q6ZNG1 722 aa15.4■□□□□ 0.06
PTCD3-202ENST00000409326 DAZ1Q9NQZ3 744 aaKnown RBP15.4■□□□□ 0.06
PTCD3-202ENST00000409326 SSNA1O43805 119 aa15.39■□□□□ 0.05
PTCD3-202ENST00000409326 TSC22D2O75157 780 aa15.39■□□□□ 0.05
PTCD3-202ENST00000409326 IGKV1-17P01599 117 aa15.39■□□□□ 0.05
PTCD3-202ENST00000409326 IGLC1P0CG04 106 aa15.39■□□□□ 0.05
PTCD3-202ENST00000409326 OR1S2Q8NGQ3 325 aa15.39■□□□□ 0.05
PTCD3-202ENST00000409326 NPIPB3Q92617 1050 aa15.39■□□□□ 0.05
PTCD3-202ENST00000409326 MARC2Q969Z3 335 aa15.39■□□□□ 0.05
PTCD3-202ENST00000409326 ACY3Q96HD9 319 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms