RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 SIGLEC14Q08ET2 396 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 PDLIM4P50479 330 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 C1orf162Q8NEQ5 155 aaPredicted RBP10.28□□□□□ -0.76
SHANK2-203ENST00000409161 ADAMTS7Q9UKP4 1686 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 RIPPLY3P57055 190 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 ACP7Q6ZNF0 438 aa10.28□□□□□ -0.76
SHANK2-203ENST00000409161 SNRPCP09234 159 aaKnown RBP10.27□□□□□ -0.76
SHANK2-203ENST00000409161 IGHV3-72A0A0B4J1Y9 119 aa10.27□□□□□ -0.76
SHANK2-203ENST00000409161 RNASE4P34096 147 aaKnown RBP10.27□□□□□ -0.76
SHANK2-203ENST00000409161 PILRBQ9UKJ0 227 aa10.27□□□□□ -0.76
SHANK2-203ENST00000409161 A0A1W2PRE2 83 aa10.27□□□□□ -0.77
SHANK2-203ENST00000409161 FOXS1O43638 330 aa10.27□□□□□ -0.77
SHANK2-203ENST00000409161 FNDC1Q4ZHG4 1894 aaPredicted RBP10.27□□□□□ -0.77
SHANK2-203ENST00000409161 NTN1O95631 604 aa10.27□□□□□ -0.77
SHANK2-203ENST00000409161 TMEM54Q969K7 222 aa10.27□□□□□ -0.77
SHANK2-203ENST00000409161 PLA2G2FQ9BZM2 168 aa10.27□□□□□ -0.77
SHANK2-203ENST00000409161 A0A1B0GW64 132 aa10.27□□□□□ -0.77
SHANK2-203ENST00000409161 TRAV8-1A0A0A6YYK1 113 aa10.27□□□□□ -0.77
SHANK2-203ENST00000409161 RPL23P62829 140 aaKnown RBP10.27□□□□□ -0.77
SHANK2-203ENST00000409161 ST6GALNAC6Q969X2 333 aa10.27□□□□□ -0.77
SHANK2-203ENST00000409161 C1QTNF9P0C862 333 aa10.27□□□□□ -0.77
SHANK2-203ENST00000409161 COL9A1P20849 921 aa10.27□□□□□ -0.77
SHANK2-203ENST00000409161 PEBP1P30086 187 aaKnown RBP10.27□□□□□ -0.77
SHANK2-203ENST00000409161 HEPN1Q6WQI6 88 aa10.27□□□□□ -0.77
SHANK2-203ENST00000409161 IGHV1-69-2A0A0G2JMI3 117 aa10.27□□□□□ -0.77
SHANK2-203ENST00000409161 MAJINQ3KP22 176 aa10.27□□□□□ -0.77
SHANK2-203ENST00000409161 C1orf53Q5VUE5 145 aa10.27□□□□□ -0.77
SHANK2-203ENST00000409161 CCL19Q99731 98 aa10.27□□□□□ -0.77
SHANK2-203ENST00000409161 KIAA1549Q9HCM3 1950 aa10.26□□□□□ -0.77
SHANK2-203ENST00000409161 TMEM144Q7Z5S9 345 aa10.26□□□□□ -0.77
SHANK2-203ENST00000409161 CENPVQ7Z7K6 275 aaPredicted RBP10.26□□□□□ -0.77
SHANK2-203ENST00000409161 ADMP35318 185 aa10.26□□□□□ -0.77
SHANK2-203ENST00000409161 Q6ZT83 130 aa10.26□□□□□ -0.77
SHANK2-203ENST00000409161 GTF3AQ92664 365 aaKnown RBP10.26□□□□□ -0.77
SHANK2-203ENST00000409161 DTX4Q9Y2E6 619 aa10.26□□□□□ -0.77
SHANK2-203ENST00000409161 NRXN2Q9P2S2 1712 aa10.26□□□□□ -0.77
SHANK2-203ENST00000409161 TRGV11A0A075B6L2 103 aa10.26□□□□□ -0.77
SHANK2-203ENST00000409161 GLRXP35754 106 aa10.26□□□□□ -0.77
SHANK2-203ENST00000409161 TSKUQ8WUA8 353 aa10.26□□□□□ -0.77
SHANK2-203ENST00000409161 HIST1H2BLQ99880 126 aa10.26□□□□□ -0.77
SHANK2-203ENST00000409161 ZNF501Q96CX3 271 aaPredicted RBP10.25□□□□□ -0.77
SHANK2-203ENST00000409161 MRPL20Q9BYC9 149 aaKnown RBP10.25□□□□□ -0.77
SHANK2-203ENST00000409161 SNAI2O43623 268 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 CD5P06127 495 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 IGFBP6P24592 240 aaPredicted RBP10.25□□□□□ -0.77
SHANK2-203ENST00000409161 ST6GALNAC3Q8NDV1 305 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 PLEKHB2Q96CS7 222 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 RAMP1O60894 148 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 FOXL1Q12952 345 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 DENND4CQ5VZ89 1909 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 F8VVB4 439 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 F8VWA3 439 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 LHFPL4Q7Z7J7 247 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 IGFBP2P18065 325 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 IFI27L1Q96BM0 104 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 DUSP14O95147 198 aaKnown RBP10.25□□□□□ -0.77
SHANK2-203ENST00000409161 TFF3Q07654 80 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 FAM166AQ6J272 317 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 TMEM167AQ8TBQ9 72 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 DPM3Q9P2X0 92 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 FOXA2Q9Y261 457 aaPredicted RBP10.25□□□□□ -0.77
SHANK2-203ENST00000409161 TRAV1-1A0A0B4J248 108 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 LDLRAD4O15165 306 aa10.25□□□□□ -0.77
SHANK2-203ENST00000409161 LINC00312Q9Y6C7 94 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 TRBV24-1A0A075B6N3 115 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 TRGV2A0A075B6R0 118 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 TOMM40O96008 361 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 ZNF784Q8NCA9 323 aaPredicted RBP10.24□□□□□ -0.77
SHANK2-203ENST00000409161 CST9LQ9H4G1 147 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 NCOA6Q14686 2063 aaPredicted RBP10.24□□□□□ -0.77
SHANK2-203ENST00000409161 C15orf61A6NNL5 157 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 TGIF1Q15583 401 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 ZNF826PQ6ZT77 177 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 TNFRSF6BO95407 300 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 ABHD17AQ96GS6 310 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 CITED1Q99966 193 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 ZIC4Q8N9L1 334 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 CFHR5Q9BXR6 569 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 MPZP25189 248 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.24□□□□□ -0.77
SHANK2-203ENST00000409161 TRAV5A0A0B4J249 113 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 CD28P10747 220 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 C18orf12Q96KH6 178 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 LINC01587Q99440 93 aa10.24□□□□□ -0.77
SHANK2-203ENST00000409161 TCRBV4S1A1TA0A5B7 111 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 SAA1P0DJI8 122 aaPredicted RBP10.23□□□□□ -0.77
SHANK2-203ENST00000409161 FBXL7Q9UJT9 491 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 TRAV2A0A0B4J234 112 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 CCL4P13236 92 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 LEPROTO15243 131 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 CD7P09564 240 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 TMEM155Q4W5P6 130 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 IGKV1-8A0A0C4DH67 115 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 TGFAP01135 160 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 HOXD3P31249 432 aaPredicted RBP10.23□□□□□ -0.77
SHANK2-203ENST00000409161 EGR4Q05215 589 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 EDA2RQ9HAV5 297 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 ATP5J2P56134 94 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 PEAR1Q5VY43 1037 aaPredicted RBP10.23□□□□□ -0.77
SHANK2-203ENST00000409161 RNASE7Q9H1E1 156 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms