RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 COQ2Q96H96 371 aa10.15□□□□□ -0.78
SMCR8-201ENST00000406438 DMRT1Q9Y5R6 373 aa10.15□□□□□ -0.78
SMCR8-201ENST00000406438 CA1P00915 261 aaPredicted RBP10.15□□□□□ -0.78
SMCR8-201ENST00000406438 CTHRC1Q96CG8 243 aa10.15□□□□□ -0.78
SMCR8-201ENST00000406438 SIGLEC12Q96PQ1 595 aa10.15□□□□□ -0.78
SMCR8-201ENST00000406438 TM2D1Q9BX74 207 aa10.15□□□□□ -0.78
SMCR8-201ENST00000406438 IGHV2OR16-5A0A0B4J2B6 119 aa10.15□□□□□ -0.78
SMCR8-201ENST00000406438 CKS1BP61024 79 aa10.15□□□□□ -0.78
SMCR8-201ENST00000406438 PAX2Q02962 417 aa10.15□□□□□ -0.78
SMCR8-201ENST00000406438 FAM27E3Q08E93 113 aa10.15□□□□□ -0.78
SMCR8-201ENST00000406438 SLC25A38Q96DW6 304 aa10.15□□□□□ -0.78
SMCR8-201ENST00000406438 PRSS22Q9GZN4 317 aa10.15□□□□□ -0.78
SMCR8-201ENST00000406438 TRAV9-1A0A075B6T8 112 aa10.15□□□□□ -0.79
SMCR8-201ENST00000406438 PLNP26678 52 aa10.15□□□□□ -0.79
SMCR8-201ENST00000406438 SPCS1Q9Y6A9 102 aa10.15□□□□□ -0.79
SMCR8-201ENST00000406438 C1QCP02747 245 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 NHLRC3Q5JS37 347 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 DTX1Q86Y01 620 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 FBLIM1Q8WUP2 373 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 SLC25A2Q9BXI2 301 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 KIAA1549LQ6ZVL6 1849 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 NBR2O15453 112 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 TIAF1O95411 115 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 CD8AP01732 235 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 IGHV4-39P01824 125 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 NIT1Q86X76 327 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 RNASE6Q93091 150 aaKnown RBP10.14□□□□□ -0.79
SMCR8-201ENST00000406438 TFF3Q07654 80 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 CSRP2Q16527 193 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 CD200R1LQ6Q8B3 271 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 GLMPQ8WWB7 406 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 CHCHD2Q9Y6H1 151 aaPredicted RBP10.14□□□□□ -0.79
SMCR8-201ENST00000406438 S100A7L2Q5SY68 101 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 SLC25A15Q9Y619 301 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 IZUMO1RA6ND01 250 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 NUP210Q8TEM1 1887 aaPredicted RBP10.14□□□□□ -0.79
SMCR8-201ENST00000406438 MUC21A0A0G2JKD1 596 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 MUC21A0A140T8X8 626 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 FABP5P3A8MUU1 101 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 TMEM14DPA8MWL7 114 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 SRSF1Q07955 248 aaKnown RBP eCLIP10.14□□□□□ -0.79
SMCR8-201ENST00000406438 MUC21Q5SSG8 566 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 PPP1R32Q7Z5V6 425 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 CFHR5Q9BXR6 569 aa10.14□□□□□ -0.79
SMCR8-201ENST00000406438 TDGF1P3P51864 188 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 GDF15Q99988 308 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 METRNQ9UJH8 293 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 PLXNA4Q9HCM2 1894 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 OTORQ9NRC9 128 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 C17orf100A8MU93 164 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 ZNF883P0CG24 379 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 EIF4EBP2Q13542 120 aaPredicted RBP10.13□□□□□ -0.79
SMCR8-201ENST00000406438 SEPSECSQ9HD40 501 aaKnown RBP10.13□□□□□ -0.79
SMCR8-201ENST00000406438 TRAV14DV4A0A0A6YYC5 116 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 TRAV8-2A0A0B4J237 113 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 SLC17A3O00476 420 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 LDLRAD4O15165 306 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 ZNF415Q09FC8 603 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 MESP2Q0VG99 397 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 SPSB2Q99619 263 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 CST9LQ9H4G1 147 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 PSCAO43653 123 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 C1QTNF5Q9BXJ0 243 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 ZNF257Q9Y2Q1 563 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 ABHD17AQ96GS6 310 aa10.13□□□□□ -0.79
SMCR8-201ENST00000406438 DUSP14O95147 198 aaKnown RBP10.12□□□□□ -0.79
SMCR8-201ENST00000406438 ZNF708P17019 499 aa10.12□□□□□ -0.79
SMCR8-201ENST00000406438 WDYHV1Q96HA8 205 aa10.12□□□□□ -0.79
SMCR8-201ENST00000406438 SLC50A1Q9BRV3 221 aa10.12□□□□□ -0.79
SMCR8-201ENST00000406438 IQCF6A8MYZ5 107 aa10.12□□□□□ -0.79
SMCR8-201ENST00000406438 RFPL3SP0C7P2 107 aa10.12□□□□□ -0.79
SMCR8-201ENST00000406438 MRPL20Q9BYC9 149 aaKnown RBP10.12□□□□□ -0.79
SMCR8-201ENST00000406438 SLC25A28Q96A46 364 aa10.12□□□□□ -0.79
SMCR8-201ENST00000406438 MRPS18CQ9Y3D5 142 aaKnown RBP10.12□□□□□ -0.79
SMCR8-201ENST00000406438 IGKV1D-42A0A075B6H8 117 aa10.12□□□□□ -0.79
SMCR8-201ENST00000406438 ADARB2-AS1A8MUL3 147 aa10.12□□□□□ -0.79
SMCR8-201ENST00000406438 GGTLC3B5MD39 225 aa10.12□□□□□ -0.79
SMCR8-201ENST00000406438 EGR1P18146 543 aa10.12□□□□□ -0.79
SMCR8-201ENST00000406438 NSUN5P1Q3KNT7 163 aa10.12□□□□□ -0.79
SMCR8-201ENST00000406438 PGPEP1LA6NFU8 196 aa10.12□□□□□ -0.79
SMCR8-201ENST00000406438 IGHV1-2P23083 117 aa10.12□□□□□ -0.79
SMCR8-201ENST00000406438 A0A0G2JK05 382 aa10.12□□□□□ -0.79
SMCR8-201ENST00000406438 C12orf77C9JDV5 145 aa10.11□□□□□ -0.79
SMCR8-201ENST00000406438 UMODP07911 640 aa10.11□□□□□ -0.79
SMCR8-201ENST00000406438 CYB5R2Q6BCY4 276 aa10.11□□□□□ -0.79
SMCR8-201ENST00000406438 OR13A1Q8NGR1 328 aa10.11□□□□□ -0.79
SMCR8-201ENST00000406438 HOXA3O43365 443 aaPredicted RBP10.11□□□□□ -0.79
SMCR8-201ENST00000406438 ZNF600Q6ZNG1 722 aa10.11□□□□□ -0.79
SMCR8-201ENST00000406438 C8orf46Q8TAG6 207 aa10.11□□□□□ -0.79
SMCR8-201ENST00000406438 SRSF6Q13247 344 aaKnown RBP10.11□□□□□ -0.79
SMCR8-201ENST00000406438 SPRED2Q7Z698 418 aa10.11□□□□□ -0.79
SMCR8-201ENST00000406438 SNAI2O43623 268 aa10.11□□□□□ -0.79
SMCR8-201ENST00000406438 DPM2O94777 84 aa10.11□□□□□ -0.79
SMCR8-201ENST00000406438 IGHV3-11P01762 117 aa10.11□□□□□ -0.79
SMCR8-201ENST00000406438 PRADC1Q9BSG0 188 aa10.11□□□□□ -0.79
SMCR8-201ENST00000406438 CYSLTR1Q9Y271 337 aa10.11□□□□□ -0.79
SMCR8-201ENST00000406438 C17orf98A8MV24 154 aa10.11□□□□□ -0.79
SMCR8-201ENST00000406438 F2Z2F3 143 aa10.11□□□□□ -0.79
SMCR8-201ENST00000406438 ZP1P60852 638 aa10.11□□□□□ -0.79
SMCR8-201ENST00000406438 IGHV3OR16-8A0A075B7F1 116 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms