RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 MMD2Q8IY49 270 aa7.94□□□□□ -1.14
MSH2-202ENST00000406134 LINC00479Q96M42 142 aa7.94□□□□□ -1.14
MSH2-202ENST00000406134 REG1BP48304 166 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 OR5B3Q8NH48 314 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 MBD6Q96DN6 1003 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 SMIM27A0A1W2PRY6 76 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 C17orf100A8MU93 164 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 ZNF137PP52743 207 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 ZNF90Q03938 601 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 ZNF714Q96N38 554 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 RCHY1Q96PM5 261 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 HINT2Q9BX68 163 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 C22orf46C9J442 243 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 TMEM178BH3BS89 294 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 CX3CL1P78423 397 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 BSPH1Q075Z2 132 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 FXYD3Q14802 87 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 TMEM30BQ3MIR4 351 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 C1orf194Q5T5A4 169 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 OR8I2Q8N0Y5 310 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 OR1L6Q8NGR2 347 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 OSR1Q8TAX0 266 aaPredicted RBP7.93□□□□□ -1.14
MSH2-202ENST00000406134 SNHG12Q9BXW3 62 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 MALRD1Q5VYJ5 2156 aa7.93□□□□□ -1.14
MSH2-202ENST00000406134 ZNF705GA8MUZ8 300 aaPredicted RBP7.92□□□□□ -1.14
MSH2-202ENST00000406134 LOXP28300 417 aaPredicted RBP7.92□□□□□ -1.14
MSH2-202ENST00000406134 S100A7P31151 101 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 PPOXP50336 477 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 Q0VG73 95 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 TCF15Q12870 199 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 GDF5OSQ5U4N7 250 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 TEX43Q6ZNM6 134 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 C19orf35Q6ZS72 473 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 FKBP11Q9NYL4 201 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 VWC2LB2RUY7 222 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 OVOL3O00110 214 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 DLX1P56177 255 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 TMEM167AQ8TBQ9 72 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 HARBI1Q96MB7 349 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 CELSR1Q9NYQ6 3014 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 PYYP10082 97 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 MEF2CQ06413 473 aaPredicted RBP7.92□□□□□ -1.14
MSH2-202ENST00000406134 RTL8BQ17RB0 113 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 MRPL41Q8IXM3 137 aaKnown RBP7.92□□□□□ -1.14
MSH2-202ENST00000406134 THAP8Q8NA92 274 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 FXYD5Q96DB9 178 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 GNB1LQ9BYB4 327 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 ZNF430Q9H8G1 570 aaPredicted RBP7.92□□□□□ -1.14
MSH2-202ENST00000406134 NAGKQ9UJ70 344 aa7.92□□□□□ -1.14
MSH2-202ENST00000406134 HELTA6NFD8 242 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 CA1P00915 261 aaPredicted RBP7.91□□□□□ -1.14
MSH2-202ENST00000406134 IGHV3-48P01763 117 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 IER3P46695 156 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 RPEL1Q2QD12 228 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 ZNF329Q86UD4 541 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 LINC00311Q8N616 119 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 C8orf31Q8N9H6 132 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 TMEM208Q9BTX3 173 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 GNB4Q9HAV0 340 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 TMEM106BQ9NUM4 274 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 TECRQ9NZ01 308 aaKnown RBP7.91□□□□□ -1.14
MSH2-202ENST00000406134 A0A1W2PPI3 338 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 A0A1W2PRE2 83 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 hADV38S2A0JD32 116 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 CRYGBP07316 175 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 Q71RC1 249 aaPredicted RBP7.91□□□□□ -1.14
MSH2-202ENST00000406134 CMTM2Q8TAZ6 248 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 BTF3L4Q96K17 158 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 UHRF2Q96PU4 802 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 OSTCQ9NRP0 149 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 TMEM167BQ9NRX6 74 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 SSUH2Q9Y2M2 353 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 SHISA9B4DS77 424 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 DLL1O00548 723 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 ISLRO14498 428 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 GNG4P50150 75 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 RPL8P62917 257 aaKnown RBP7.91□□□□□ -1.14
MSH2-202ENST00000406134 IQCJQ1A5X6 159 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 NHLRC2Q8NBF2 726 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 PRSS33Q8NF86 280 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 ENY2Q9NPA8 101 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 FBXL7Q9UJT9 491 aa7.91□□□□□ -1.14
MSH2-202ENST00000406134 IGLC7A0M8Q6 106 aa7.9□□□□□ -1.14
MSH2-202ENST00000406134 BMPR1BO00238 502 aa7.9□□□□□ -1.14
MSH2-202ENST00000406134 CRYGCP07315 174 aa7.9□□□□□ -1.14
MSH2-202ENST00000406134 C8orf88P0DMB2 117 aa7.9□□□□□ -1.14
MSH2-202ENST00000406134 ERVFC1-1P60608 527 aa7.9□□□□□ -1.14
MSH2-202ENST00000406134 RNF151Q2KHN1 245 aa7.9□□□□□ -1.14
MSH2-202ENST00000406134 RAB9BQ9NP90 201 aa7.9□□□□□ -1.14
MSH2-202ENST00000406134 SNURFLB1AK76 121 aa7.9□□□□□ -1.14
MSH2-202ENST00000406134 DLEU1O43261 78 aa7.9□□□□□ -1.14
MSH2-202ENST00000406134 SLC35B1P78383 322 aa7.9□□□□□ -1.14
MSH2-202ENST00000406134 FAM71F2Q6NXP2 309 aa7.9□□□□□ -1.14
MSH2-202ENST00000406134 LHFPL4Q7Z7J7 247 aa7.9□□□□□ -1.14
MSH2-202ENST00000406134 CBLN4Q9NTU7 201 aa7.9□□□□□ -1.14
MSH2-202ENST00000406134 ZNF835Q9Y2P0 537 aa7.9□□□□□ -1.14
MSH2-202ENST00000406134 A6NNC1 897 aa7.9□□□□□ -1.15
MSH2-202ENST00000406134 CNTFRP26992 372 aa7.9□□□□□ -1.15
MSH2-202ENST00000406134 ATP5IP56385 69 aaPredicted RBP7.9□□□□□ -1.15
MSH2-202ENST00000406134 SUMO1P63165 101 aaKnown RBP7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms