RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 FAM24BQ8N5W8 94 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 OR51M1Q9H341 326 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 NCOR1P1Q9H4R4 102 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 SIGLEC9Q9Y336 463 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 TRIOO75962 3097 aa7.41□□□□□ -1.22
LIG4-202ENST00000405925 IGHV3-66A0A0C4DH42 116 aa7.4□□□□□ -1.22
LIG4-202ENST00000405925 OR2T8A6NH00 312 aa7.4□□□□□ -1.22
LIG4-202ENST00000405925 FAM90A9PA6NNJ1 464 aa7.4□□□□□ -1.22
LIG4-202ENST00000405925 H3BQ15 152 aa7.4□□□□□ -1.22
LIG4-202ENST00000405925 IGHV2-70P01814 119 aa7.4□□□□□ -1.22
LIG4-202ENST00000405925 RELBQ01201 579 aa7.4□□□□□ -1.22
LIG4-202ENST00000405925 RBPMS2Q6ZRY4 209 aaKnown RBP7.4□□□□□ -1.22
LIG4-202ENST00000405925 OR4X2Q8NGF9 303 aa7.4□□□□□ -1.22
LIG4-202ENST00000405925 TMPRSS5Q9H3S3 457 aa7.4□□□□□ -1.22
LIG4-202ENST00000405925 ZNF257Q9Y2Q1 563 aa7.4□□□□□ -1.22
LIG4-202ENST00000405925 TBL2Q9Y4P3 447 aaKnown RBP7.4□□□□□ -1.22
LIG4-202ENST00000405925 ZNF134P52741 427 aa7.4□□□□□ -1.22
LIG4-202ENST00000405925 CLRN3Q8NCR9 226 aa7.4□□□□□ -1.22
LIG4-202ENST00000405925 OR10G8Q8NGN5 311 aa7.4□□□□□ -1.22
LIG4-202ENST00000405925 OR52E5Q8NH55 327 aa7.4□□□□□ -1.22
LIG4-202ENST00000405925 ISOC2Q96AB3 205 aa7.4□□□□□ -1.22
LIG4-202ENST00000405925 SGK494Q96LW2 274 aa7.4□□□□□ -1.22
LIG4-202ENST00000405925 SETD2Q9BYW2 2564 aaPredicted RBP7.4□□□□□ -1.22
LIG4-202ENST00000405925 CGB1A6NKQ9 187 aa7.4□□□□□ -1.23
LIG4-202ENST00000405925 FOXI3A8MTJ6 420 aaPredicted RBP7.4□□□□□ -1.23
LIG4-202ENST00000405925 C19orf84I3L1E1 186 aa7.4□□□□□ -1.23
LIG4-202ENST00000405925 LHBP01229 141 aa7.4□□□□□ -1.23
LIG4-202ENST00000405925 IGHV4-39P01824 125 aa7.4□□□□□ -1.23
LIG4-202ENST00000405925 HIST1H1EP10412 219 aaKnown RBP7.4□□□□□ -1.23
LIG4-202ENST00000405925 UBE2E1P51965 193 aa7.4□□□□□ -1.23
LIG4-202ENST00000405925 DLX6P56179 175 aa7.4□□□□□ -1.23
LIG4-202ENST00000405925 BEND2Q8NDZ0 799 aa7.4□□□□□ -1.23
LIG4-202ENST00000405925 C2CD4CQ8TF44 421 aa7.4□□□□□ -1.23
LIG4-202ENST00000405925 ABCA12Q86UK0 2595 aa7.4□□□□□ -1.23
LIG4-202ENST00000405925 TMSB15BA0A087X1C1 80 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 A0A1W2PRX2 142 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 C7orf77A4D0Y5 90 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 ZNF705FA8MVS1 300 aaPredicted RBP7.39□□□□□ -1.23
LIG4-202ENST00000405925 VENTXO95231 258 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 ORM1P02763 201 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 ZNF705DP0CH99 300 aaPredicted RBP7.39□□□□□ -1.23
LIG4-202ENST00000405925 ZNF705BP0CI00 300 aaPredicted RBP7.39□□□□□ -1.23
LIG4-202ENST00000405925 PRNTQ86SH4 94 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 C19orf24Q9BVV8 132 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 SEC11CQ9BY50 192 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 IGHV4-61A0A0C4DH41 118 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 CAMPP49913 170 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 TMEM177Q53S58 311 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 ZNF738Q8NE65 137 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 RNF5Q99942 180 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 RARRES2Q99969 163 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 GCHFRP30047 84 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 GPX4P36969 197 aaPredicted RBP7.39□□□□□ -1.23
LIG4-202ENST00000405925 ID1P41134 155 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 DAZAP2Q15038 168 aaPredicted RBP7.39□□□□□ -1.23
LIG4-202ENST00000405925 TM4SF20Q53R12 229 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 STPG2Q8N412 459 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 WDR83OSQ9Y284 106 aa7.39□□□□□ -1.23
LIG4-202ENST00000405925 P01737 135 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 AMY1AP04745 511 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 VDAC2P45880 294 aaPredicted RBP7.38□□□□□ -1.23
LIG4-202ENST00000405925 MRPL32Q9BYC8 188 aaKnown RBP7.38□□□□□ -1.23
LIG4-202ENST00000405925 JKAMPQ9P055 326 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 FUT9Q9Y231 359 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 IGHV4-30-2A0A087WSY4 118 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 TRAV41A0A0B4J266 112 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 IGHV2-5P01817 119 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 PF4P02776 101 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 CRYBB3P26998 211 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 DIAPH2-AS1Q14236 149 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 CR1LQ2VPA4 569 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 PDZD11Q5EBL8 140 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 FAM71F2Q6NXP2 309 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 IGHV1-69DA0A0B4J2H0 117 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 IGHV1-69P01742 117 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 S100A8P05109 93 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 AREGP15514 252 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 GATA3P23771 443 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 TMEM78Q5T7P6 136 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 CBLN2Q8IUK8 224 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 OR1P1Q8NH06 330 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 REG4Q9BYZ8 158 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 SMDT1Q9H4I9 107 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 WFDC1Q9HC57 220 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 NAT8BQ9UHF3 227 aa7.38□□□□□ -1.23
LIG4-202ENST00000405925 NBEAP1P0C6P0 100 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 SMIM17P0DL12 118 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 ZNF329Q86UD4 541 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 OR4B1Q8NGF8 309 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 JMJD8Q96S16 334 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 TXNDC17Q9BRA2 123 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 POLQO75417 2590 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 NTF3P20783 257 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 CNTFRP26992 372 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 RAB9AP51151 201 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 FAM74A3Q4VXF1 159 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 MIR17HGQ75NE6 70 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 TMEM37Q8WXS4 190 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 TNCP24821 2201 aa7.37□□□□□ -1.23
LIG4-202ENST00000405925 C15orf32Q32M92 178 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms