RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 SLAQ13239 276 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 C1orf229Q6ZS94 237 aaPredicted RBP12.31□□□□□ -0.44
ATG4B-206ENST00000405546 C22orf34Q6ZV56 151 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 TCTEX1D1Q8N7M0 179 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 MGST2Q99735 147 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 CDKN1BP46527 198 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 PSG5Q15238 335 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 AMMECR1LQ6DCA0 310 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 LHFPL4Q7Z7J7 247 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 FAM90A1Q86YD7 464 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 Q8N7P7 452 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 IFI27L2Q9H2X8 130 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 DYSFO75923 2080 aa12.31□□□□□ -0.44
ATG4B-206ENST00000405546 NUDT3O95989 172 aa12.3□□□□□ -0.44
ATG4B-206ENST00000405546 P0C879 139 aa12.3□□□□□ -0.44
ATG4B-206ENST00000405546 CA7P43166 264 aa12.3□□□□□ -0.44
ATG4B-206ENST00000405546 FOXA3P55318 350 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-206ENST00000405546 TIMM23BQ5SRD1 257 aa12.3□□□□□ -0.44
ATG4B-206ENST00000405546 MIR17HGQ75NE6 70 aa12.3□□□□□ -0.44
ATG4B-206ENST00000405546 OR7C2O60412 319 aa12.3□□□□□ -0.44
ATG4B-206ENST00000405546 MMP23AO75900 390 aa12.3□□□□□ -0.44
ATG4B-206ENST00000405546 GOSR1O95249 250 aa12.3□□□□□ -0.44
ATG4B-206ENST00000405546 GCHFRP30047 84 aa12.3□□□□□ -0.44
ATG4B-206ENST00000405546 GUSBP1Q15486 140 aa12.3□□□□□ -0.44
ATG4B-206ENST00000405546 SPATA12Q7Z6I5 190 aa12.3□□□□□ -0.44
ATG4B-206ENST00000405546 NPVFQ9HCQ7 196 aa12.3□□□□□ -0.44
ATG4B-206ENST00000405546 V9GYV3 84 aa12.3□□□□□ -0.44
ATG4B-206ENST00000405546 J3QR06 171 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 GFRA3O60609 400 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 CD99P14209 185 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 USF1P22415 310 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-206ENST00000405546 MLANAQ16655 118 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 CDC42EP3Q9UKI2 254 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 PRRX1P54821 245 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 LOXL3P58215 753 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 EIF4EBP1Q13541 118 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-206ENST00000405546 EBLN2Q6P2I7 272 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 TEPPQ6URK8 271 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 LINC00173Q6ZV60 143 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 OR51B2Q9Y5P1 312 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 ZNF292O60281 2723 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 HELTA6NFD8 242 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 ITGB1BP1O14713 200 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 IGFBP2P18065 325 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 KLHDC1Q8N7A1 406 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 OR8B2Q96RD0 313 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 PLEKHA3Q9HB20 300 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 DSCAMO60469 2012 aa12.29□□□□□ -0.44
ATG4B-206ENST00000405546 KBTBD11-OT1A0A1B0GTJ5 212 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 PRB3Q04118 309 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-206ENST00000405546 TMEM136Q6ZRR5 245 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 RPH3ALQ9UNE2 315 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 FAM215AQ9Y5M1 114 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 SAP30O75446 220 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 IGKV1-16P04430 117 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 APELAP0DMC3 54 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 HSPE1P61604 102 aaKnown RBP12.28□□□□□ -0.44
ATG4B-206ENST00000405546 GGTLC1Q9BX51 225 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 COL27A1Q8IZC6 1860 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-206ENST00000405546 MUC21A0A0G2JKD1 596 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 MUC21A0A140T8X8 626 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 APCSP02743 223 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 MFAP2P55001 183 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 MUC21Q5SSG8 566 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 C1orf185Q5T7R7 199 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 PIP4P1Q86T03 277 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 OR2T6Q8NHC8 308 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 CST9LQ9H4G1 147 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 ZNF355PQ9NSJ1 428 aa12.28□□□□□ -0.44
ATG4B-206ENST00000405546 CXorf1O96002 111 aa12.27□□□□□ -0.45
ATG4B-206ENST00000405546 IGHV1-46P01743 117 aa12.27□□□□□ -0.45
ATG4B-206ENST00000405546 STAG3L2P0CL84 134 aa12.27□□□□□ -0.45
ATG4B-206ENST00000405546 STAG3L3P0CL85 134 aa12.27□□□□□ -0.45
ATG4B-206ENST00000405546 CCL3L1P16619 93 aa12.27□□□□□ -0.45
ATG4B-206ENST00000405546 Q0VG73 95 aa12.27□□□□□ -0.45
ATG4B-206ENST00000405546 ENSAO43768 121 aaKnown RBP12.27□□□□□ -0.45
ATG4B-206ENST00000405546 CUL9Q8IWT3 2517 aa12.27□□□□□ -0.45
ATG4B-206ENST00000405546 MBD3L4A6NDZ8 208 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-206ENST00000405546 MBD3L3A6NE82 208 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-206ENST00000405546 MBD3L5A6NJ08 208 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-206ENST00000405546 UQCRFS1P47985 274 aa12.26□□□□□ -0.45
ATG4B-206ENST00000405546 C17orf58Q2M2W7 97 aa12.26□□□□□ -0.45
ATG4B-206ENST00000405546 OR10W1Q8NGF6 305 aa12.26□□□□□ -0.45
ATG4B-206ENST00000405546 MBD3L2Q8NHZ7 208 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-206ENST00000405546 SFXN3Q9BWM7 321 aa12.26□□□□□ -0.45
ATG4B-206ENST00000405546 CD40P25942 277 aa12.26□□□□□ -0.45
ATG4B-206ENST00000405546 ZNF138P52744 262 aa12.26□□□□□ -0.45
ATG4B-206ENST00000405546 RHOBP62745 196 aa12.26□□□□□ -0.45
ATG4B-206ENST00000405546 EFNB3Q15768 340 aa12.26□□□□□ -0.45
ATG4B-206ENST00000405546 RTL8BQ17RB0 113 aa12.26□□□□□ -0.45
ATG4B-206ENST00000405546 ZNF331Q9NQX6 463 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-206ENST00000405546 IGHV2-70DA0A0C4DH43 119 aa12.26□□□□□ -0.45
ATG4B-206ENST00000405546 IGFL2Q6UWQ7 119 aa12.26□□□□□ -0.45
ATG4B-206ENST00000405546 COMMD5Q9GZQ3 224 aa12.26□□□□□ -0.45
ATG4B-206ENST00000405546 CACNA1BQ00975 2339 aa12.25□□□□□ -0.45
ATG4B-206ENST00000405546 ATRXP46100 2492 aa12.25□□□□□ -0.45
ATG4B-206ENST00000405546 A0A087X0K7 114 aa12.25□□□□□ -0.45
ATG4B-206ENST00000405546 VDAC2P45880 294 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-206ENST00000405546 PPOXP50336 477 aa12.25□□□□□ -0.45
ATG4B-206ENST00000405546 RPL19P84098 196 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms