RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 PAX4O43316 350 aa9.21□□□□□ -0.93
CACNA1C-216ENST00000399638 ZNF525Q8N782 197 aa9.21□□□□□ -0.93
CACNA1C-216ENST00000399638 CACNA1IQ9P0X4 2223 aa9.21□□□□□ -0.93
CACNA1C-216ENST00000399638 SIPA1L1O43166 1804 aa9.21□□□□□ -0.93
CACNA1C-216ENST00000399638 hADV29S1A0JD25 119 aa9.21□□□□□ -0.93
CACNA1C-216ENST00000399638 NPIPB7O75200 414 aa9.21□□□□□ -0.93
CACNA1C-216ENST00000399638 TCRAP04437 139 aa9.21□□□□□ -0.93
CACNA1C-216ENST00000399638 ZNF672Q499Z4 452 aaPredicted RBP9.21□□□□□ -0.93
CACNA1C-216ENST00000399638 C19orf24Q9BVV8 132 aa9.21□□□□□ -0.93
CACNA1C-216ENST00000399638 ACP7Q6ZNF0 438 aa9.21□□□□□ -0.93
CACNA1C-216ENST00000399638 DKK4Q9UBT3 224 aa9.21□□□□□ -0.93
CACNA1C-216ENST00000399638 H3BUT2 72 aa9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 CCL3L1P16619 93 aa9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 CRYBA2P53672 197 aa9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 GPR132Q9UNW8 380 aa9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 TRGV11A0A075B6L2 103 aa9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 TM4SF5O14894 197 aa9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 GHRHP01286 108 aa9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 FOXA3P55318 350 aaPredicted RBP9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 ZNF329Q86UD4 541 aa9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 MBD3L4A6NDZ8 208 aaPredicted RBP9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 MBD3L3A6NE82 208 aaPredicted RBP9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 MBD3L5A6NJ08 208 aaPredicted RBP9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 H0YL77 283 aa9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 APOHP02749 345 aaPredicted RBP9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 TEX38Q6PEX7 206 aa9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 ZNF818PQ6ZRF7 136 aa9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 TMEM256Q8N2U0 113 aa9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 DEFB105AQ8NG35 78 aa9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 MBD3L2Q8NHZ7 208 aaPredicted RBP9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 RCHY1Q96PM5 261 aa9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 NAA38Q9BRA0 125 aaKnown RBP9.21□□□□□ -0.94
CACNA1C-216ENST00000399638 HLA-DRB1P01911 266 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 CELA3BP08861 270 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 TRAV12-2A0A075B6T6 113 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 TRAV8-1A0A0A6YYK1 113 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 ZNF146Q15072 292 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 RFLNBQ8N5W9 214 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 MS4A6AQ9H2W1 248 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 CTXND1A0A1B0GTU2 59 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 BTCP35070 178 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 DTX1Q86Y01 620 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 GPHA2Q96T91 129 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 THSD7AQ9UPZ6 1657 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 ADAMTSL1Q8N6G6 1762 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 PAX8Q06710 450 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 TCTEX1D4Q5JR98 221 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 EPDR1Q9UM22 224 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 RS1O15537 224 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 APOC4P55056 127 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 LCN12Q6JVE5 192 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 NIT1Q86X76 327 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 OR11H1Q8NG94 326 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 OR11H2Q8NH07 326 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 SLC25A38Q96DW6 304 aa9.2□□□□□ -0.94
CACNA1C-216ENST00000399638 CTSBP07858 339 aa9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 CR1LQ2VPA4 569 aa9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 TMEM250H0YL14 139 aa9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 PPIFP30405 207 aaKnown RBP9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 RUNX1Q01196 453 aa9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 FBLN7Q53RD9 439 aa9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 ZNF414Q96IQ9 312 aa9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 SIP14410 1827 aa9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 A0A0G2JK05 382 aa9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 SLC25A47Q6Q0C1 308 aa9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 C1QTNF4Q9BXJ3 329 aa9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 KCNE5Q9UJ90 142 aa9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 ZNFX1Q9P2E3 1918 aaKnown RBP9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 KIAA1217Q5T5P2 1943 aa9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 CD28P10747 220 aa9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 CYP2G1PQ6ZSU1 146 aa9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 TAF15Q92804 592 aaKnown RBP eCLIP9.19□□□□□ -0.94
CACNA1C-216ENST00000399638 MARCH11A6NNE9 402 aa9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 WISP1O95388 367 aa9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 CFHR3Q02985 330 aa9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 NHP2Q9NX24 153 aaKnown RBP9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 POLR2AP24928 1970 aaKnown RBP9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 UBR3Q6ZT12 1888 aa9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 NRXN2Q9P2S2 1712 aa9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 ITGB1BP1O14713 200 aa9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 C8orf88P0DMB2 117 aa9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 ATP6V0CP27449 155 aa9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 SPRR3Q9UBC9 169 aa9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 TRBV5-7A0A0A0MS05 114 aa9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 CENPVL1A0A0U1RR11 272 aa9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 ADMP35318 185 aa9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 GAGE2BQ13066 116 aa9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 HOGA1Q86XE5 327 aa9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 ALPK2Q86TB3 2170 aa9.18□□□□□ -0.94
CACNA1C-216ENST00000399638 COX5BP10606 129 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 SIGMAR1Q99720 223 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 REG4Q9BYZ8 158 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 BPESC1Q9GZL8 116 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 LMO1P25800 156 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 TRAV8-3A0A0A6YYJ7 113 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 CA7P43166 264 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 H2BFSP57053 126 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 SEC11AP67812 179 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 FGFRL1Q8N441 504 aa9.17□□□□□ -0.94
CACNA1C-216ENST00000399638 OR5P3Q8WZ94 311 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms