RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 RASL10BQ96S79 203 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 SCRT1Q9BWW7 348 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 WIPI1Q5MNZ9 446 aaPredicted RBP8.08□□□□□ -1.12
SMAD9-203ENST00000399275 BVES-AS1Q5T3Y7 98 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 OCC1Q8TAD7 63 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 ZNF488Q96MN9 340 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 OVOL2Q9BRP0 275 aa8.08□□□□□ -1.12
SMAD9-203ENST00000399275 TMEM56-RWDD3S4R434 201 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 TRAV41A0A0B4J266 112 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 LOC101059948A0A1B0GTJ6 334 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 ZG16O60844 167 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 CFPP27918 469 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 RND2P52198 227 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 SRSF1Q07955 248 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMAD9-203ENST00000399275 Q6ZVH6 145 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 ZNF645Q8N7E2 425 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 RNF183Q96D59 192 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 ZNF625Q96I27 306 aaPredicted RBP8.07□□□□□ -1.12
SMAD9-203ENST00000399275 PHF7Q9BWX1 381 aaPredicted RBP8.07□□□□□ -1.12
SMAD9-203ENST00000399275 LOC102723996A0A087X1L8 192 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 PRSS12P56730 875 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 C1orf195Q5TG92 126 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 NFAM1Q8NET5 270 aaPredicted RBP8.07□□□□□ -1.12
SMAD9-203ENST00000399275 CXXC4Q9H2H0 198 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 TCTEX1D4Q5JR98 221 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 MESP1Q9BRJ9 268 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 F5H768 121 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 SOCS3O14543 225 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 ZIC3O60481 467 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 SP9P0CG40 484 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 FAM106CPP0CH98 169 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 SAA1P0DJI8 122 aaPredicted RBP8.07□□□□□ -1.12
SMAD9-203ENST00000399275 CKAP5Q14008 2032 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 FAM106AQ4KMX7 169 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 FAM166AQ6J272 317 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 C20orf173Q96LM9 149 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 FBXL7Q9UJT9 491 aa8.07□□□□□ -1.12
SMAD9-203ENST00000399275 FOXA2Q9Y261 457 aaPredicted RBP8.07□□□□□ -1.12
SMAD9-203ENST00000399275 WFDC1Q9HC57 220 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 NDUFB3O43676 98 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 GZMHP20718 246 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 TIMP3P35625 211 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 ZNF658BQ4V348 819 aaPredicted RBP8.06□□□□□ -1.12
SMAD9-203ENST00000399275 LHFPL1Q86WI0 220 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 SPEM1Q8N4L4 309 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 PAQR4Q8N4S7 273 aaPredicted RBP8.06□□□□□ -1.12
SMAD9-203ENST00000399275 GATD1Q8NB37 220 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 IGHV3-21A0A0B4J1V1 117 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 TRAV1-1A0A0B4J248 108 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 IL11RAQ14626 422 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 FAM74A4Q5TZK3 123 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 ZDHHC16Q969W1 377 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 TNFRSF19Q9NS68 423 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 TRIP12Q14669 1992 aaPredicted RBP8.06□□□□□ -1.12
SMAD9-203ENST00000399275 G3V4G9 280 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 ATOX1O00244 68 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 MYF5P13349 255 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 PPIFP30405 207 aaKnown RBP8.06□□□□□ -1.12
SMAD9-203ENST00000399275 LAMTOR3Q9UHA4 124 aa8.06□□□□□ -1.12
SMAD9-203ENST00000399275 MRPS18CQ9Y3D5 142 aaKnown RBP8.06□□□□□ -1.12
SMAD9-203ENST00000399275 CLDN14O95500 239 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 CENPVQ7Z7K6 275 aaPredicted RBP8.05□□□□□ -1.12
SMAD9-203ENST00000399275 TSKUQ8WUA8 353 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 UPK2O00526 184 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 DLL1O00548 723 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 MST1LQ2TV78 715 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 ZC2HC1BQ5TFG8 222 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 CT55Q8WUE5 264 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 PTH2Q96A98 100 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 UBL5Q9BZL1 73 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 KNL1Q8NG31 2342 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 ZSWIM8A7E2V4 1837 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 IGKV3-7A0A075B6H7 116 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 A0A087WV48 116 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 CCL2P13500 99 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 LIFP15018 202 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 MDP1Q86V88 176 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 RPRMLQ8N4K4 120 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 FMC1Q96HJ9 113 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 IGKV3D-15A0A087WSY6 115 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 IGLC7A0M8Q6 106 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 IGKV3-15P01624 115 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 PSG4Q00888 419 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 ABCA7Q8IZY2 2146 aa8.05□□□□□ -1.12
SMAD9-203ENST00000399275 IGKV3D-11A0A0A0MRZ8 115 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 IGKV3-11P04433 115 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 LGALS7P47929 136 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 Q0VG73 95 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 ORMDL2Q53FV1 153 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 AMTNQ6UX39 209 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 CIARTQ8N365 385 aaPredicted RBP8.04□□□□□ -1.12
SMAD9-203ENST00000399275 DYNLRB2Q8TF09 96 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 UCN2Q96RP3 112 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 BRCA1P38398 1863 aaKnown RBP8.04□□□□□ -1.12
SMAD9-203ENST00000399275 IGKV3OR2-268A0A0C4DH90 116 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 A0A1W2PS18 150 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 CCL7P80098 99 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 C1orf53Q5VUE5 145 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 PCSK4Q6UW60 755 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 C1QL2Q7Z5L3 287 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms