RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 BMI1P35226 326 aa9.98□□□□□ -0.81
VCX3A-202ENST00000398729 SPCS3P61009 180 aa9.98□□□□□ -0.81
VCX3A-202ENST00000398729 PVRIGQ6DKI7 326 aa9.98□□□□□ -0.81
VCX3A-202ENST00000398729 Q6ZRM9 215 aa9.98□□□□□ -0.81
VCX3A-202ENST00000398729 OR52E5Q8NH55 327 aa9.98□□□□□ -0.81
VCX3A-202ENST00000398729 MCFD2Q8NI22 146 aa9.98□□□□□ -0.81
VCX3A-202ENST00000398729 LHFPL5Q8TAF8 219 aa9.98□□□□□ -0.81
VCX3A-202ENST00000398729 SCGB3A2Q96PL1 93 aa9.98□□□□□ -0.81
VCX3A-202ENST00000398729 SCP2D1Q9UJQ7 156 aa9.98□□□□□ -0.81
VCX3A-202ENST00000398729 RYR1P21817 5038 aa9.98□□□□□ -0.81
VCX3A-202ENST00000398729 IGHV3-49A0A0A0MS15 119 aa9.97□□□□□ -0.81
VCX3A-202ENST00000398729 OPRK1P41145 380 aa9.97□□□□□ -0.81
VCX3A-202ENST00000398729 APOC4P55056 127 aa9.97□□□□□ -0.81
VCX3A-202ENST00000398729 AARDQ4LEZ3 155 aa9.97□□□□□ -0.81
VCX3A-202ENST00000398729 TMEM268Q5VZI3 342 aa9.97□□□□□ -0.81
VCX3A-202ENST00000398729 ZNF600Q6ZNG1 722 aa9.97□□□□□ -0.81
VCX3A-202ENST00000398729 SELENOHQ8IZQ5 122 aaKnown RBP9.97□□□□□ -0.81
VCX3A-202ENST00000398729 RNF2Q99496 336 aa9.97□□□□□ -0.81
VCX3A-202ENST00000398729 MCUBQ9NWR8 336 aa9.97□□□□□ -0.81
VCX3A-202ENST00000398729 CACNG5Q9UF02 275 aa9.97□□□□□ -0.81
VCX3A-202ENST00000398729 KCNIP3Q9Y2W7 256 aa9.97□□□□□ -0.81
VCX3A-202ENST00000398729 KMT2AQ03164 3969 aa9.97□□□□□ -0.81
VCX3A-202ENST00000398729 SCGB2A1O75556 95 aa9.96□□□□□ -0.82
VCX3A-202ENST00000398729 TMEM50AO95807 157 aa9.96□□□□□ -0.82
VCX3A-202ENST00000398729 CD5P06127 495 aa9.96□□□□□ -0.82
VCX3A-202ENST00000398729 HTR2BP41595 481 aa9.96□□□□□ -0.82
VCX3A-202ENST00000398729 CMC4P56277 68 aaPredicted RBP9.96□□□□□ -0.82
VCX3A-202ENST00000398729 ODF3L2Q3SX64 289 aa9.96□□□□□ -0.82
VCX3A-202ENST00000398729 TOMM20LQ6UXN7 152 aa9.96□□□□□ -0.82
VCX3A-202ENST00000398729 GPR146Q96CH1 333 aa9.96□□□□□ -0.82
VCX3A-202ENST00000398729 SOSTQ9BQB4 213 aa9.96□□□□□ -0.82
VCX3A-202ENST00000398729 OVOL2Q9BRP0 275 aa9.96□□□□□ -0.82
VCX3A-202ENST00000398729 CACFD1Q9UGQ2 172 aa9.96□□□□□ -0.82
VCX3A-202ENST00000398729 PUS1Q9Y606 427 aaKnown RBP eCLIP9.96□□□□□ -0.82
VCX3A-202ENST00000398729 DNAH10Q8IVF4 4471 aa9.96□□□□□ -0.82
VCX3A-202ENST00000398729 IGKV3-7A0A075B6H7 116 aa9.95□□□□□ -0.82
VCX3A-202ENST00000398729 IGHV3OR16-13A0A075B7E8 117 aa9.95□□□□□ -0.82
VCX3A-202ENST00000398729 IGHV3-74A0A0B4J1X5 117 aa9.95□□□□□ -0.82
VCX3A-202ENST00000398729 RPS10-NUDT3A0A1W2PQS6 291 aa9.95□□□□□ -0.82
VCX3A-202ENST00000398729 CEBPZOSA8MTT3 80 aa9.95□□□□□ -0.82
VCX3A-202ENST00000398729 CLN5O75503 358 aa9.95□□□□□ -0.82
VCX3A-202ENST00000398729 PAFAH1B2P68402 229 aa9.95□□□□□ -0.82
VCX3A-202ENST00000398729 BSXQ3C1V8 233 aa9.95□□□□□ -0.82
VCX3A-202ENST00000398729 TCF24Q7RTU0 167 aa9.95□□□□□ -0.82
VCX3A-202ENST00000398729 OR4X1Q8NH49 305 aa9.95□□□□□ -0.82
VCX3A-202ENST00000398729 IL22RA2Q969J5 263 aa9.95□□□□□ -0.82
VCX3A-202ENST00000398729 GALNT14Q96FL9 552 aa9.95□□□□□ -0.82
VCX3A-202ENST00000398729 FNDC4Q9H6D8 234 aaPredicted RBP9.95□□□□□ -0.82
VCX3A-202ENST00000398729 ZFAND3Q9H8U3 227 aa9.95□□□□□ -0.82
VCX3A-202ENST00000398729 HEYLQ9NQ87 328 aaPredicted RBP9.95□□□□□ -0.82
VCX3A-202ENST00000398729 TMEM56-RWDD3S4R434 201 aa9.95□□□□□ -0.82
VCX3A-202ENST00000398729 KIR2DL5BA0A0G2JN68 375 aa9.94□□□□□ -0.82
VCX3A-202ENST00000398729 KIR2DL5BA0A0G2JPC4 375 aa9.94□□□□□ -0.82
VCX3A-202ENST00000398729 CCDC160A6NGH7 325 aa9.94□□□□□ -0.82
VCX3A-202ENST00000398729 UBE2CO00762 179 aa9.94□□□□□ -0.82
VCX3A-202ENST00000398729 FAUP35544 74 aaKnown RBP9.94□□□□□ -0.82
VCX3A-202ENST00000398729 TFPI2P48307 235 aa9.94□□□□□ -0.82
VCX3A-202ENST00000398729 TMEM187Q14656 261 aa9.94□□□□□ -0.82
VCX3A-202ENST00000398729 FAM90A2PQ658T7 463 aa9.94□□□□□ -0.82
VCX3A-202ENST00000398729 Q6ZWC4 215 aa9.94□□□□□ -0.82
VCX3A-202ENST00000398729 KIR2DL5AQ8N109 375 aa9.94□□□□□ -0.82
VCX3A-202ENST00000398729 STPG3Q8N7X2 389 aa9.94□□□□□ -0.82
VCX3A-202ENST00000398729 KIR2DL5BQ8NHK3 375 aa9.94□□□□□ -0.82
VCX3A-202ENST00000398729 ST8SIA2Q92186 375 aa9.94□□□□□ -0.82
VCX3A-202ENST00000398729 TMEM230Q96A57 120 aa9.94□□□□□ -0.82
VCX3A-202ENST00000398729 VSIRQ9H7M9 311 aa9.94□□□□□ -0.82
VCX3A-202ENST00000398729 TP53TG1Q9Y2A0 90 aa9.94□□□□□ -0.82
VCX3A-202ENST00000398729 TRAV30A0A087WSZ9 112 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 A0A1B0GU03 582 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 SULT1A3P0DMM9 295 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 SULT1A4P0DMN0 295 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 ANXA3P12429 323 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 AKR1C4P17516 323 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 RPL35AP18077 110 aaKnown RBP9.93□□□□□ -0.82
VCX3A-202ENST00000398729 NPPCP23582 126 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 AP3S2P59780 193 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 MLANAQ16655 118 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 C2orf83Q53S99 150 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 PYDC2Q56P42 97 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 WFDC3Q8IUB2 231 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 APRG1Q8IVJ8 170 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 GBGT1Q8N5D6 347 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 SLC24A4Q8NFF2 622 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 RNASEH2CQ8TDP1 164 aaKnown RBP9.93□□□□□ -0.82
VCX3A-202ENST00000398729 TMEM231Q9H6L2 316 aa9.93□□□□□ -0.82
VCX3A-202ENST00000398729 MRPL36Q9P0J6 103 aaKnown RBP9.93□□□□□ -0.82
VCX3A-202ENST00000398729 A0A0B4J2A0 478 aa9.92□□□□□ -0.82
VCX3A-202ENST00000398729 PIGBOS1A0A0B4J2F0 54 aa9.92□□□□□ -0.82
VCX3A-202ENST00000398729 IGHV3-66A0A0C4DH42 116 aa9.92□□□□□ -0.82
VCX3A-202ENST00000398729 A0A1W2PS18 150 aa9.92□□□□□ -0.82
VCX3A-202ENST00000398729 SPRY2O43597 315 aa9.92□□□□□ -0.82
VCX3A-202ENST00000398729 NXPH3O95157 252 aa9.92□□□□□ -0.82
VCX3A-202ENST00000398729 APOHP02749 345 aaPredicted RBP9.92□□□□□ -0.82
VCX3A-202ENST00000398729 SLC25A4P12235 298 aa9.92□□□□□ -0.82
VCX3A-202ENST00000398729 S100A5P33763 92 aa9.92□□□□□ -0.82
VCX3A-202ENST00000398729 RPL11P62913 178 aaKnown RBP9.92□□□□□ -0.82
VCX3A-202ENST00000398729 SRPXP78539 464 aa9.92□□□□□ -0.82
VCX3A-202ENST00000398729 DEFB135Q30KP9 77 aa9.92□□□□□ -0.82
VCX3A-202ENST00000398729 ETFRF1Q6IPR1 90 aa9.92□□□□□ -0.82
VCX3A-202ENST00000398729 NOXA1Q86UR1 476 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms