RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 IGFL3Q6UXB1 125 aa11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 VSIRQ9H7M9 311 aa11.74□□□□□ -0.53
PCDHGA11-201ENST00000398587 EP400Q96L91 3159 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 KIAA1671Q9BY89 1806 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 IGHV2-26A0A0B4J1V2 119 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 C1QTNF9BB2RNN3 333 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 GTF2H5Q6ZYL4 71 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 GAFA1Q96PS6 74 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 Q9H3A6 140 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 PLXNB3Q9ULL4 1909 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 IGHV3-49A0A0A0MS15 119 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 ZNF841Q6ZN19 808 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 DOCK10Q96BY6 2186 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 LINC00473A8K010 186 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 BTF3P20290 206 aaKnown RBP11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 GCSAMLQ5JQS6 135 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 OR10AG1Q8NH19 301 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 DDB2Q92466 427 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 MSRB2Q9Y3D2 182 aa11.73□□□□□ -0.53
PCDHGA11-201ENST00000398587 FOLR2P14207 255 aa11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 CD24P25063 80 aa11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 OR10W1Q8NGF6 305 aa11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 SNRPD3P62318 126 aaKnown RBP11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 C10orf55Q5SWW7 151 aa11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 LYRM7Q5U5X0 104 aa11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 RNF125Q96EQ8 232 aa11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 SOX21Q9Y651 276 aaPredicted RBP11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 TGFAP01135 160 aa11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 HIST1H1AQ02539 215 aaPredicted RBP11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 PRSS8Q16651 343 aa11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 SLC25A48Q6ZT89 311 aaKnown RBP11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 CIARTQ8N365 385 aaPredicted RBP11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 RPP25LQ8N5L8 163 aaKnown RBP11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 TMEM167AQ8TBQ9 72 aa11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 OTORQ9NRC9 128 aa11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 A0A1B0GUT8 65 aa11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 FBLL1A6NHQ2 334 aaKnown RBP11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 STAG3L2P0CL84 134 aa11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 STAG3L3P0CL85 134 aa11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 NTF4P34130 210 aa11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 CLEC19AQ6UXS0 136 aa11.72□□□□□ -0.53
PCDHGA11-201ENST00000398587 IGKV1-6A0A0C4DH72 117 aa11.71□□□□□ -0.53
PCDHGA11-201ENST00000398587 A0A1B0GW64 132 aa11.71□□□□□ -0.53
PCDHGA11-201ENST00000398587 A6NDN8 102 aa11.71□□□□□ -0.53
PCDHGA11-201ENST00000398587 ZNF207O43670 478 aaKnown RBP11.71□□□□□ -0.53
PCDHGA11-201ENST00000398587 LMO1P25800 156 aa11.71□□□□□ -0.53
PCDHGA11-201ENST00000398587 RPP21Q9H633 154 aaKnown RBP11.71□□□□□ -0.53
PCDHGA11-201ENST00000398587 EFNA4P52798 201 aa11.71□□□□□ -0.53
PCDHGA11-201ENST00000398587 ZGRF1Q86YA3 2104 aa11.71□□□□□ -0.54
PCDHGA11-201ENST00000398587 C1QTNF9P0C862 333 aa11.71□□□□□ -0.54
PCDHGA11-201ENST00000398587 ST6GALNAC3Q8NDV1 305 aa11.71□□□□□ -0.54
PCDHGA11-201ENST00000398587 RNF138Q8WVD3 245 aa11.71□□□□□ -0.54
PCDHGA11-201ENST00000398587 RNF5Q99942 180 aa11.71□□□□□ -0.54
PCDHGA11-201ENST00000398587 ATG101Q9BSB4 218 aa11.71□□□□□ -0.54
PCDHGA11-201ENST00000398587 COL25A1Q9BXS0 654 aaPredicted RBP11.71□□□□□ -0.54
PCDHGA11-201ENST00000398587 REG4Q9BYZ8 158 aa11.71□□□□□ -0.54
PCDHGA11-201ENST00000398587 A0A0G2JRQ6 117 aa11.71□□□□□ -0.54
PCDHGA11-201ENST00000398587 SNCGO76070 127 aa11.71□□□□□ -0.54
PCDHGA11-201ENST00000398587 FOXA3P55318 350 aaPredicted RBP11.71□□□□□ -0.54
PCDHGA11-201ENST00000398587 Q6AWC8 147 aa11.71□□□□□ -0.54
PCDHGA11-201ENST00000398587 DMRTA2Q96SC8 542 aa11.71□□□□□ -0.54
PCDHGA11-201ENST00000398587 AP5S1Q9NUS5 200 aa11.71□□□□□ -0.54
PCDHGA11-201ENST00000398587 NOTCH3Q9UM47 2321 aa11.7□□□□□ -0.54
PCDHGA11-201ENST00000398587 IGHV3OR16-8A0A075B7F1 116 aa11.7□□□□□ -0.54
PCDHGA11-201ENST00000398587 OOSP1A8MZH6 123 aa11.7□□□□□ -0.54
PCDHGA11-201ENST00000398587 ITGB1BP1O14713 200 aa11.7□□□□□ -0.54
PCDHGA11-201ENST00000398587 PYYP10082 97 aa11.7□□□□□ -0.54
PCDHGA11-201ENST00000398587 DLX1P56177 255 aa11.7□□□□□ -0.54
PCDHGA11-201ENST00000398587 SRSF9Q13242 221 aaKnown RBP eCLIP11.7□□□□□ -0.54
PCDHGA11-201ENST00000398587 SPATA45Q537H7 98 aa11.7□□□□□ -0.54
PCDHGA11-201ENST00000398587 ZNF600Q6ZNG1 722 aa11.7□□□□□ -0.54
PCDHGA11-201ENST00000398587 Q6ZRM9 215 aa11.7□□□□□ -0.54
PCDHGA11-201ENST00000398587 OSTCQ9NRP0 149 aa11.7□□□□□ -0.54
PCDHGA11-201ENST00000398587 EPDR1Q9UM22 224 aa11.7□□□□□ -0.54
PCDHGA11-201ENST00000398587 K7ENP7 123 aa11.7□□□□□ -0.54
PCDHGA11-201ENST00000398587 RAX2Q96IS3 184 aa11.7□□□□□ -0.54
PCDHGA11-201ENST00000398587 UQCR10Q9UDW1 63 aa11.7□□□□□ -0.54
PCDHGA11-201ENST00000398587 TRAV3A0A0B4J244 114 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 RPLP1P05386 114 aaKnown RBP11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 DDTP30046 118 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 NMUP48645 174 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 IGLV3-1P01715 115 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 HOXA5P20719 270 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 FAM159AQ6UWV7 190 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 IMMP2LQ96T52 175 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 DMRT1Q9Y5R6 373 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 IGHV1-3A0A0C4DH29 117 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 IGHV3-66A0A0C4DH42 116 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 C3orf36Q3SXR2 165 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 ZNF585BQ52M93 769 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 COL5A1-AS1Q5SY13 56 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 PIP4P1Q86T03 277 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 IZUMO1RA6ND01 250 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 TNFSF13O75888 250 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 SMAGPQ0VAQ4 97 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 PET117Q6UWS5 81 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 OCC1Q8TAD7 63 aa11.69□□□□□ -0.54
PCDHGA11-201ENST00000398587 CBY3A6NI87 242 aa11.68□□□□□ -0.54
PCDHGA11-201ENST00000398587 NPIPB6E9PJ23 425 aa11.68□□□□□ -0.54
PCDHGA11-201ENST00000398587 H0YJW9 148 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms