RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 APELAP0DMC3 54 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 COX7A1P24310 79 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 COL8A2P25067 703 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 CRYBB3P26998 211 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 SRSF9Q13242 221 aaKnown RBP eCLIP4.09□□□□□ -1.75
SMAD4-202ENST00000398417 HLA-DRB5Q30154 266 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 NHLRC2Q8NBF2 726 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 BEND2Q8NDZ0 799 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 ZNF71Q9NQZ8 489 aaPredicted RBP4.09□□□□□ -1.75
SMAD4-202ENST00000398417 ZNF835Q9Y2P0 537 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 ZFHX3Q15911 3703 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 TRAV5A0A0B4J249 113 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 ZNF841Q6ZN19 808 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 SLC24A4Q8NFF2 622 aa4.09□□□□□ -1.75
SMAD4-202ENST00000398417 UBE2G1P62253 170 aa4.09□□□□□ -1.76
SMAD4-202ENST00000398417 KIAA1644Q3SXP7 199 aa4.09□□□□□ -1.76
SMAD4-202ENST00000398417 CD300EQ496F6 205 aaPredicted RBP4.09□□□□□ -1.76
SMAD4-202ENST00000398417 SLC45A2Q9UMX9 530 aa4.09□□□□□ -1.76
SMAD4-202ENST00000398417 J3QR06 171 aa4.09□□□□□ -1.76
SMAD4-202ENST00000398417 IGHV3-48P01763 117 aa4.09□□□□□ -1.76
SMAD4-202ENST00000398417 TPPP2P59282 170 aa4.09□□□□□ -1.76
SMAD4-202ENST00000398417 TNXAQ16473 311 aa4.09□□□□□ -1.76
SMAD4-202ENST00000398417 S100A7L2Q5SY68 101 aa4.09□□□□□ -1.76
SMAD4-202ENST00000398417 ZNF295-AS1Q8N0V1 137 aa4.09□□□□□ -1.76
SMAD4-202ENST00000398417 EAF1Q96JC9 268 aaPredicted RBP4.09□□□□□ -1.76
SMAD4-202ENST00000398417 EGLN1Q9GZT9 426 aa4.09□□□□□ -1.76
SMAD4-202ENST00000398417 CGB1A6NKQ9 187 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-202ENST00000398417 CGAP01215 116 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 CCL3L1P16619 93 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 KIR2DS2P43631 304 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 OR4X2Q8NGF9 303 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 OR51G1Q8NGK1 321 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 MISP3Q96FF7 219 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 IGKV1D-17A0A075B6S4 117 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 PFN1P07737 140 aaKnown RBP4.08□□□□□ -1.76
SMAD4-202ENST00000398417 HNRNPA3P51991 378 aaKnown RBP4.08□□□□□ -1.76
SMAD4-202ENST00000398417 PRSS8Q16651 343 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 C11orf53Q8IXP5 236 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 NAT8BQ9UHF3 227 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 PTPRBP23467 1997 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 BSNQ9UPA5 3926 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 A0A087X0M5 115 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 A0A1B0GX30 115 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 NPSP0C0P6 89 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 ARL14EPLP0DKL9 152 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 SLC35B1P78383 322 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 ZNF146Q15072 292 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 MORN2Q502X0 79 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 TMEM97Q5BJF2 176 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 TEPPQ6URK8 271 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 PDPNQ86YL7 162 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 NABP2Q9BQ15 211 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 MRPL37Q9BZE1 423 aaKnown RBP4.08□□□□□ -1.76
SMAD4-202ENST00000398417 PLXNA2O75051 1894 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 TRGV8A0A0C4DH27 118 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 PLA2G2AP14555 144 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 ADMP35318 185 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 GPX4P36969 197 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-202ENST00000398417 ZNF114Q8NC26 417 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 Q8NFD4 153 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 VSTM2AQ8TAG5 236 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 TMEM170AQ8WVE7 144 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 RNF2Q99496 336 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 NPIPB11E5RHQ5 1161 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 IGHG3P01860 377 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 OR5AL1P0C617 328 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 RPL29P47914 159 aaKnown RBP4.08□□□□□ -1.76
SMAD4-202ENST00000398417 CNN1P51911 297 aaKnown RBP4.08□□□□□ -1.76
SMAD4-202ENST00000398417 TMEM108Q6UXF1 575 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 TREML4Q6UXN2 200 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 PQLC2Q6ZP29 291 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 TMEM183AQ8IXX5 376 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 RNF183Q96D59 192 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 SSBP3Q9BWW4 388 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-202ENST00000398417 RELNP78509 3460 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 IGKV3-7A0A075B6H7 116 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 PPIAL4EA0A075B759 164 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 hADV38S2A0JD32 116 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 PPIAL4DF5H284 164 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 PPIAL4FP0DN26 164 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 PKIAP61925 76 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 VMA21Q3ZAQ7 101 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 EP300Q09472 2414 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-202ENST00000398417 DPRXA6NFQ7 191 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 IFITM10A6NMD0 228 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 PPIHO43447 177 aaKnown RBP4.08□□□□□ -1.76
SMAD4-202ENST00000398417 RBMY1CP0DJD4 496 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 CRISP2P16562 243 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 UBE2L3P68036 154 aaKnown RBP4.08□□□□□ -1.76
SMAD4-202ENST00000398417 SGMS2Q8NHU3 365 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 OCC1Q8TAD7 63 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 STARD4Q96DR4 205 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 PRNDQ9UKY0 176 aa4.08□□□□□ -1.76
SMAD4-202ENST00000398417 FAM90A27PA6NNH2 459 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 IGLV2-14P01704 120 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 TPTE2P1Q5T6R2 138 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 MBNL2Q5VZF2 373 aaKnown RBP4.07□□□□□ -1.76
SMAD4-202ENST00000398417 OR2T6Q8NHC8 308 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 U3KQE9 123 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms