RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 BET1LQ9NYM9 111 aa14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 CTSZQ9UBR2 303 aa14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 TPRP12270 2363 aaKnown RBP14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 SPTA1P02549 2419 aa14.9□□□□□ -0.02
CHRFAM7A-202ENST00000397827 TMEM238C9JI98 176 aa14.89□□□□□ -0.03
CHRFAM7A-202ENST00000397827 Q6ZWC4 215 aa14.89□□□□□ -0.03
CHRFAM7A-202ENST00000397827 SPACA3Q8IXA5 215 aa14.89□□□□□ -0.03
CHRFAM7A-202ENST00000397827 PTPRQQ9UMZ3 2332 aa14.89□□□□□ -0.03
CHRFAM7A-202ENST00000397827 APOA2P02652 100 aa14.89□□□□□ -0.03
CHRFAM7A-202ENST00000397827 SRP14P37108 136 aaKnown RBP14.89□□□□□ -0.03
CHRFAM7A-202ENST00000397827 OR4C5Q8NGB2 326 aa14.89□□□□□ -0.03
CHRFAM7A-202ENST00000397827 OR10X1Q8NGY0 326 aa14.89□□□□□ -0.03
CHRFAM7A-202ENST00000397827 RNASE6Q93091 150 aaKnown RBP14.89□□□□□ -0.03
CHRFAM7A-202ENST00000397827 NABP2Q9BQ15 211 aa14.89□□□□□ -0.03
CHRFAM7A-202ENST00000397827 SLC45A2Q9UMX9 530 aa14.89□□□□□ -0.03
CHRFAM7A-202ENST00000397827 CDKN1AP38936 164 aa14.88□□□□□ -0.03
CHRFAM7A-202ENST00000397827 OR9G1Q8NH87 305 aa14.88□□□□□ -0.03
CHRFAM7A-202ENST00000397827 OCC1Q8TAD7 63 aa14.88□□□□□ -0.03
CHRFAM7A-202ENST00000397827 SFRP2Q96HF1 295 aa14.88□□□□□ -0.03
CHRFAM7A-202ENST00000397827 TACC2O95359 2948 aa14.88□□□□□ -0.03
CHRFAM7A-202ENST00000397827 HSBP1L1C9JCN9 74 aa14.88□□□□□ -0.03
CHRFAM7A-202ENST00000397827 NDUFB3O43676 98 aa14.88□□□□□ -0.03
CHRFAM7A-202ENST00000397827 RNASE2P10153 161 aaKnown RBP14.88□□□□□ -0.03
CHRFAM7A-202ENST00000397827 KCNIP4Q6PIL6 250 aa14.88□□□□□ -0.03
CHRFAM7A-202ENST00000397827 TMEM144Q7Z5S9 345 aa14.88□□□□□ -0.03
CHRFAM7A-202ENST00000397827 OR5B3Q8NH48 314 aa14.88□□□□□ -0.03
CHRFAM7A-202ENST00000397827 OSR1Q8TAX0 266 aaPredicted RBP14.88□□□□□ -0.03
CHRFAM7A-202ENST00000397827 COMMD5Q9GZQ3 224 aa14.88□□□□□ -0.03
CHRFAM7A-202ENST00000397827 A0A0U1RQK1 487 aa14.87□□□□□ -0.03
CHRFAM7A-202ENST00000397827 IL3RAP26951 378 aa14.87□□□□□ -0.03
CHRFAM7A-202ENST00000397827 OR5AN1Q8NGI8 311 aa14.87□□□□□ -0.03
CHRFAM7A-202ENST00000397827 FLYWCH2Q96CP2 140 aaKnown RBP14.87□□□□□ -0.03
CHRFAM7A-202ENST00000397827 TXNDC17Q9BRA2 123 aa14.87□□□□□ -0.03
CHRFAM7A-202ENST00000397827 DYNLRB1Q9NP97 96 aa14.87□□□□□ -0.03
CHRFAM7A-202ENST00000397827 E7EQL1 145 aa14.87□□□□□ -0.03
CHRFAM7A-202ENST00000397827 PSG5Q15238 335 aa14.87□□□□□ -0.03
CHRFAM7A-202ENST00000397827 TBR1Q16650 682 aa14.87□□□□□ -0.03
CHRFAM7A-202ENST00000397827 C2orf83Q53S99 150 aa14.87□□□□□ -0.03
CHRFAM7A-202ENST00000397827 LRRC10Q5BKY1 277 aa14.87□□□□□ -0.03
CHRFAM7A-202ENST00000397827 C10orf55Q5SWW7 151 aa14.87□□□□□ -0.03
CHRFAM7A-202ENST00000397827 ASCL5Q7RTU5 278 aa14.87□□□□□ -0.03
CHRFAM7A-202ENST00000397827 CMTM2Q8TAZ6 248 aa14.87□□□□□ -0.03
CHRFAM7A-202ENST00000397827 ZNF835Q9Y2P0 537 aa14.87□□□□□ -0.03
CHRFAM7A-202ENST00000397827 LRBAP50851 2863 aa14.86□□□□□ -0.03
CHRFAM7A-202ENST00000397827 RPL8P62917 257 aaKnown RBP14.86□□□□□ -0.03
CHRFAM7A-202ENST00000397827 UNQ5815/PRO19632Q6UWF5 114 aa14.86□□□□□ -0.03
CHRFAM7A-202ENST00000397827 SGMS2Q8NHU3 365 aa14.86□□□□□ -0.03
CHRFAM7A-202ENST00000397827 IMMP2LQ96T52 175 aa14.86□□□□□ -0.03
CHRFAM7A-202ENST00000397827 CSTL1Q9H114 145 aa14.86□□□□□ -0.03
CHRFAM7A-202ENST00000397827 TMEM238LA0A1B0GVL6 79 aa14.86□□□□□ -0.03
CHRFAM7A-202ENST00000397827 MDFIC2A0A1B0GVS7 189 aa14.86□□□□□ -0.03
CHRFAM7A-202ENST00000397827 ZNF320A2RRD8 509 aa14.86□□□□□ -0.03
CHRFAM7A-202ENST00000397827 SHISA9B4DS77 424 aa14.86□□□□□ -0.03
CHRFAM7A-202ENST00000397827 FNDC10F2Z333 226 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 CD99P14209 185 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 OR2T6Q8NHC8 308 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 NUDT11Q96G61 164 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 NDUFA4L2Q9NRX3 87 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 TRAPPC1Q9Y5R8 145 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 NBASA2RRP1 2371 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 TNFRSF13BO14836 293 aaPredicted RBP14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 LOXP28300 417 aaPredicted RBP14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 DLX1P56177 255 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 HSPB9Q9BQS6 159 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 LAMTOR2Q9Y2Q5 125 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 TOMM40O96008 361 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 MT-CO2P00403 227 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 IGHV3-48P01763 117 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 TYMSP04818 313 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 FAM87AP0C7U9 286 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 PRB3Q04118 309 aaPredicted RBP14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 ZNF738Q8NE65 137 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 OR1L8Q8NGR8 309 aa14.85□□□□□ -0.03
CHRFAM7A-202ENST00000397827 K7EN84 100 aa14.84□□□□□ -0.03
CHRFAM7A-202ENST00000397827 OR10J4P0C629 311 aa14.84□□□□□ -0.03
CHRFAM7A-202ENST00000397827 CD69Q07108 199 aa14.84□□□□□ -0.03
CHRFAM7A-202ENST00000397827 TMEM177Q53S58 311 aa14.84□□□□□ -0.03
CHRFAM7A-202ENST00000397827 OR4C13Q8NGP0 309 aa14.84□□□□□ -0.03
CHRFAM7A-202ENST00000397827 ZNF503Q96F45 646 aa14.84□□□□□ -0.03
CHRFAM7A-202ENST00000397827 OR7C2O60412 319 aa14.84□□□□□ -0.03
CHRFAM7A-202ENST00000397827 FBLN7Q53RD9 439 aa14.84□□□□□ -0.03
CHRFAM7A-202ENST00000397827 RITA1Q96K30 269 aa14.84□□□□□ -0.03
CHRFAM7A-202ENST00000397827 SCNM1Q9BWG6 230 aa14.84□□□□□ -0.03
CHRFAM7A-202ENST00000397827 COX11Q9Y6N1 276 aa14.84□□□□□ -0.03
CHRFAM7A-202ENST00000397827 ABCA4P78363 2273 aa14.83□□□□□ -0.04
CHRFAM7A-202ENST00000397827 TRAV34A0A0B4J273 112 aa14.83□□□□□ -0.04
CHRFAM7A-202ENST00000397827 GRIFINA4D1Z8 144 aa14.83□□□□□ -0.04
CHRFAM7A-202ENST00000397827 VSTM5A8MXK1 200 aa14.83□□□□□ -0.04
CHRFAM7A-202ENST00000397827 LCN2P80188 198 aa14.83□□□□□ -0.04
CHRFAM7A-202ENST00000397827 SSBP2P81877 361 aaPredicted RBP14.83□□□□□ -0.04
CHRFAM7A-202ENST00000397827 HLA-DRB5Q30154 266 aa14.83□□□□□ -0.04
CHRFAM7A-202ENST00000397827 TXN2Q99757 166 aa14.83□□□□□ -0.04
CHRFAM7A-202ENST00000397827 IGHV3-72A0A0B4J1Y9 119 aa14.83□□□□□ -0.04
CHRFAM7A-202ENST00000397827 CGB1A6NKQ9 187 aa14.83□□□□□ -0.04
CHRFAM7A-202ENST00000397827 TPPP2P59282 170 aa14.83□□□□□ -0.04
CHRFAM7A-202ENST00000397827 ERHP84090 104 aaKnown RBP14.83□□□□□ -0.04
CHRFAM7A-202ENST00000397827 RPL19P84098 196 aaKnown RBP14.83□□□□□ -0.04
CHRFAM7A-202ENST00000397827 WT1-ASQ06250 92 aa14.83□□□□□ -0.04
CHRFAM7A-202ENST00000397827 SSUH2Q9Y2M2 353 aa14.83□□□□□ -0.04
CHRFAM7A-202ENST00000397827 DCHS2Q6V1P9 2916 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms