RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 TMEM267Q0VDI3 215 aaPredicted RBP4.75□□□□□ -1.65
PTPRD-206ENST00000397617 LINC01559Q495D7 138 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 MEX3AA1L020 520 aaKnown RBP4.75□□□□□ -1.65
PTPRD-206ENST00000397617 CTRB1P17538 263 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 AWAT1Q58HT5 328 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 CTRB2Q6GPI1 263 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 PRSS57Q6UWY2 283 aa4.75□□□□□ -1.65
PTPRD-206ENST00000397617 ZANQ9Y493 2812 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 IGLC7A0M8Q6 106 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 NBR2O15453 112 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 RPL7P18124 248 aaKnown RBP4.74□□□□□ -1.65
PTPRD-206ENST00000397617 C5orf64Q2M2E5 130 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 LRRC75A-AS1Q8N1F1 130 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 RXFP4Q8TDU9 374 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 ITLN2Q8WWU7 325 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-206ENST00000397617 DMXL1Q9Y485 3027 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 NIPBLQ6KC79 2804 aaeCLIP4.74□□□□□ -1.65
PTPRD-206ENST00000397617 IGHV1-3A0A0C4DH29 117 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 H3BQ15 152 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 CXCL1P09341 107 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 OR51G1Q8NGK1 321 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 OR51B6Q9H340 312 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 PXMP4Q9Y6I8 212 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 ADCYAP1P18509 176 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 ZNF343Q6P1L6 599 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 C16orf54Q6UWD8 224 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 SRSF12Q8WXF0 261 aaKnown RBP4.74□□□□□ -1.65
PTPRD-206ENST00000397617 IQCJQ1A5X6 159 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 FFAR4Q5NUL3 377 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 SPNS3Q6ZMD2 512 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 RPRMLQ8N4K4 120 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 C5orf30Q96GV9 206 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 FGF7P21781 194 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 G6PCP35575 357 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 ACSM6Q6P461 480 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 CCL17Q92583 94 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 PERPQ96FX8 193 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 CTSZQ9UBR2 303 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 METRNQ9UJH8 293 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 BTNL3Q6UXE8 466 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 TACC2O95359 2948 aa4.74□□□□□ -1.65
PTPRD-206ENST00000397617 BTN1A1Q13410 526 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 ATP5L2Q7Z4Y8 100 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 COL6A3P12111 3177 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 PHOX2AO14813 284 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 ZFP82Q8N141 532 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 OR4B1Q8NGF8 309 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 OR51M1Q9H341 326 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 PPP5D1E7EU14 171 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 HSPB6O14558 160 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 TMEM182Q6ZP80 229 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-206ENST00000397617 CYB561D1Q8N8Q1 229 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 BOLLQ8N9W6 283 aaKnown RBP4.73□□□□□ -1.65
PTPRD-206ENST00000397617 CFHR4Q92496 578 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 AGPAT2O15120 278 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 FAM106CPP0CH98 169 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 PDLIM4P50479 330 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 AKR1C1Q04828 323 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 TMEM217Q8N7C4 229 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 STPG3Q8N7X2 389 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 YPEL4Q96NS1 127 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 SH3BGRL3Q9H299 93 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 ZFP30Q9Y2G7 519 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 PSMB11A5LHX3 300 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 C11orf94C9JXX5 98 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 CLEC3BP05452 202 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 OR9G9P0C7N8 305 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 C2CD4CQ8TF44 421 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 RAXQ9Y2V3 346 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 TPTE2P1Q5T6R2 138 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 GTF2H5Q6ZYL4 71 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 BPIFA4PQ86YQ2 179 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 OR5R1Q8NH85 324 aa4.73□□□□□ -1.65
PTPRD-206ENST00000397617 MRPL53Q96EL3 112 aaKnown RBP4.73□□□□□ -1.65
PTPRD-206ENST00000397617 HRNRQ86YZ3 2850 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-206ENST00000397617 SETXQ7Z333 2677 aaKnown RBP4.72□□□□□ -1.65
PTPRD-206ENST00000397617 LOC105371242A0A075B767 164 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 HLA-DQA1P01909 254 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 PFN1P07737 140 aaKnown RBP4.72□□□□□ -1.65
PTPRD-206ENST00000397617 DEFA4P12838 97 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 H3BP45 60 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 K7EM74 188 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 SLC25A5P05141 298 aaKnown RBP4.72□□□□□ -1.65
PTPRD-206ENST00000397617 NECAP1Q8NC96 275 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 NOL4LQ96MY1 436 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-206ENST00000397617 TEX50A0A1B0GTY4 177 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 M0R143 59 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 WIPF2Q8TF74 440 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-206ENST00000397617 RSG1Q9BU20 258 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 BOD1L1Q8NFC6 3051 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 TRAV20A0A0B4J274 112 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 UBE2L5PA0A1B0GUS4 154 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 RRHO14718 337 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 ESDP10768 282 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 LINC01551Q86U37 167 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 GRAMD2BQ96HH9 432 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 SSBP3Q9BWW4 388 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-206ENST00000397617 MRPL20Q9BYC9 149 aaKnown RBP4.72□□□□□ -1.65
PTPRD-206ENST00000397617 SMIM3Q9BZL3 60 aa4.72□□□□□ -1.65
PTPRD-206ENST00000397617 PRDM13Q9H4Q3 707 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms