RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 PPIAL4EA0A075B759 164 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 PPIAL4CA0A0B4J2A2 164 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 C21orf140B9A014 251 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 PPIAL4DF5H284 164 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.14□□□□□ -1.75
SSR1-202ENST00000397511 PPIAL4FP0DN26 164 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 MYOD1P15172 320 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 NPY1RP25929 384 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 WDR82Q6UXN9 313 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 TMEM136Q6ZRR5 245 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 H2BFWTQ7Z2G1 175 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 RPRMLQ8N4K4 120 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 C9orf106Q8NAJ2 232 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 GTSF1LQ9H1H1 148 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 KMT2EQ8IZD2 1858 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 ZGRF1Q86YA3 2104 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 TRAV26-1A0A087WT03 109 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 TRAV3A0A0B4J244 114 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 FAM231BA6NCW3 169 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 SPRY3O43610 288 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 PF4P02776 101 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 AMY1AP04745 511 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 CECR9P0C854 216 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 CRYBA4P53673 196 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 SEC11AP67812 179 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 GABRA6Q16445 453 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 DUX4L9Q6RFH8 374 aaPredicted RBP4.14□□□□□ -1.75
SSR1-202ENST00000397511 FAM214BQ7L5A3 538 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 ZNF645Q8N7E2 425 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 DEFB124Q8NES8 71 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 LRRC29Q8WV35 223 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 LSM10Q969L4 123 aaKnown RBP4.14□□□□□ -1.75
SSR1-202ENST00000397511 SSBP4Q9BWG4 385 aaPredicted RBP4.14□□□□□ -1.75
SSR1-202ENST00000397511 COMMD5Q9GZQ3 224 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 FNDC4Q9H6D8 234 aaPredicted RBP4.14□□□□□ -1.75
SSR1-202ENST00000397511 NPVFQ9HCQ7 196 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 ZNRD1Q9P1U0 126 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 TANC2Q9HCD6 1990 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 TRBV20OR9-2A0A075B6H5 130 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 TMEM30CPA0ZSE6 113 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 OR4C46A6NHA9 309 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 LRRC30A6NM36 301 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 K7EP34 96 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 BMPR1BO00238 502 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 HLA-DRB1P01911 266 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 APCSP02743 223 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 GATA2P23769 480 aaPredicted RBP4.14□□□□□ -1.75
SSR1-202ENST00000397511 CRYBB3P26998 211 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 CEACAM3P40198 252 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 ERVK11-1P61568 191 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 CX3CL1P78423 397 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 TRIP6Q15654 476 aaKnown RBP4.14□□□□□ -1.75
SSR1-202ENST00000397511 DEFB109BQ30KR1 87 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 C11orf53Q8IXP5 236 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 ZCCHC24Q8N2G6 241 aaKnown RBP4.14□□□□□ -1.75
SSR1-202ENST00000397511 ABHD12Q8N2K0 398 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 TMEM178AQ8NBL3 297 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 OR5A1Q8NGJ0 315 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 FAM222BQ8WU58 562 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 SSMEM1Q8WWF3 244 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 TMEM70Q9BUB7 260 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 PKIBQ9C010 78 aa4.14□□□□□ -1.75
SSR1-202ENST00000397511 APC2O95996 2303 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 A0A1W2PPV4 95 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 SPINK4O60575 86 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 LIPFP07098 398 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 OR9G9P0C7N8 305 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 FRMD6-AS1P0C7T7 363 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 GPR183P32249 361 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 ZNF146Q15072 292 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 TMEM249Q2WGJ8 235 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 ASPHD1Q5U4P2 390 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 EBLN2Q6P2I7 272 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 MTURNQ8N3F0 131 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 CD177Q8N6Q3 437 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 SNRNP40Q96DI7 357 aaKnown RBP4.13□□□□□ -1.75
SSR1-202ENST00000397511 JKAMPQ9P055 326 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 LY96Q9Y6Y9 160 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 COL27A1Q8IZC6 1860 aaPredicted RBP4.13□□□□□ -1.75
SSR1-202ENST00000397511 CUBNO60494 3623 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 SCO2A0A1W2PP80 73 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 A6NDN8 102 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 C9orf118A6NHY6 69 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 M0R1B8 84 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 CRYGCP07315 174 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 USF1P22415 310 aaPredicted RBP4.13□□□□□ -1.75
SSR1-202ENST00000397511 KIR2DL2P43627 348 aaPredicted RBP4.13□□□□□ -1.75
SSR1-202ENST00000397511 GPR12P47775 334 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 ZNF134P52741 427 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 RPL24P83731 157 aaKnown RBP4.13□□□□□ -1.75
SSR1-202ENST00000397511 HSD52Q0P140 79 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 TNXAQ16473 311 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 MSMPQ1L6U9 139 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 TMEM14EPQ6UXP3 125 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 ACP7Q6ZNF0 438 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 LINC00596Q86U02 117 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 OR2K2Q8NGT1 345 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 NPCDR1Q9BY65 106 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 TMEM191AQ9H0A3 160 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 HES4Q9HCC6 221 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms