RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 SLURP1P55000 103 aa11.22□□□□□ -0.61
SEC13-208ENST00000397109 RPL8P62917 257 aaKnown RBP11.22□□□□□ -0.61
SEC13-208ENST00000397109 SSX9Q7RTT3 188 aa11.22□□□□□ -0.61
SEC13-208ENST00000397109 ZNF429Q86V71 674 aa11.22□□□□□ -0.61
SEC13-208ENST00000397109 PFDN2Q9UHV9 154 aa11.22□□□□□ -0.61
SEC13-208ENST00000397109 FAM223BA6NKX1 122 aa11.21□□□□□ -0.61
SEC13-208ENST00000397109 SCAF4O95104 1147 aaKnown RBP11.21□□□□□ -0.61
SEC13-208ENST00000397109 IGKV1-5P01602 117 aa11.21□□□□□ -0.61
SEC13-208ENST00000397109 P0C879 139 aa11.21□□□□□ -0.61
SEC13-208ENST00000397109 DEFB121Q5J5C9 76 aa11.21□□□□□ -0.61
SEC13-208ENST00000397109 C10orf55Q5SWW7 151 aa11.21□□□□□ -0.61
SEC13-208ENST00000397109 OR4A47Q6IF82 309 aa11.21□□□□□ -0.61
SEC13-208ENST00000397109 ZNF343Q6P1L6 599 aa11.21□□□□□ -0.61
SEC13-208ENST00000397109 FAM223AQ8IWN6 122 aa11.21□□□□□ -0.61
SEC13-208ENST00000397109 EIF4E3Q8N5X7 224 aaKnown RBP11.21□□□□□ -0.61
SEC13-208ENST00000397109 ARV1Q9H2C2 271 aa11.21□□□□□ -0.61
SEC13-208ENST00000397109 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.21□□□□□ -0.61
SEC13-208ENST00000397109 ZNF257Q9Y2Q1 563 aa11.21□□□□□ -0.61
SEC13-208ENST00000397109 ERVK-16P61578 105 aa11.2□□□□□ -0.62
SEC13-208ENST00000397109 POLR2GP62487 172 aaKnown RBP eCLIP11.2□□□□□ -0.62
SEC13-208ENST00000397109 ZNF266Q14584 549 aa11.2□□□□□ -0.62
SEC13-208ENST00000397109 SAT2Q96F10 170 aaPredicted RBP11.2□□□□□ -0.62
SEC13-208ENST00000397109 SMIM8Q96KF7 97 aa11.2□□□□□ -0.62
SEC13-208ENST00000397109 PEF1Q9UBV8 284 aaKnown RBP11.2□□□□□ -0.62
SEC13-208ENST00000397109 CACNG5Q9UF02 275 aa11.2□□□□□ -0.62
SEC13-208ENST00000397109 TRBV9A0A0B4J1U6 114 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 ANKRD34BA5PLL1 514 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 NPIPB5A8MRT5 1133 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 TEX22C9J3V5 150 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 SYNGR2O43760 224 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 KRASP01116 189 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 SEC11BP0C7V7 166 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 RHOGP84095 191 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 ATP5G2Q06055 141 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 FAM209BQ5JX69 171 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 ACSM6Q6P461 480 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 TMEM252Q8N6L7 170 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 NECAP1Q8NC96 275 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 ELOVL1Q9BW60 279 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 TMEM140Q9NV12 185 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 FBXL17Q9UF56 701 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 A0A0G2JRQ6 117 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 UPK2O00526 184 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 SAP30O75446 220 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 G6PCP35575 357 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 RAB5CP51148 216 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 EWSR1Q01844 656 aaKnown RBP eCLIP11.19□□□□□ -0.62
SEC13-208ENST00000397109 AARDQ4LEZ3 155 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 Q6ZRM9 215 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 H2BFWTQ7Z2G1 175 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 CIB3Q96Q77 187 aaPredicted RBP11.19□□□□□ -0.62
SEC13-208ENST00000397109 OR4C12Q96R67 309 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 SRSF8Q9BRL6 282 aaKnown RBP11.19□□□□□ -0.62
SEC13-208ENST00000397109 HSPB7Q9UBY9 170 aa11.19□□□□□ -0.62
SEC13-208ENST00000397109 E7EUB6 86 aa11.18□□□□□ -0.62
SEC13-208ENST00000397109 SSSCA1O60232 199 aa11.18□□□□□ -0.62
SEC13-208ENST00000397109 CRYGCP07315 174 aa11.18□□□□□ -0.62
SEC13-208ENST00000397109 CAV2P51636 162 aa11.18□□□□□ -0.62
SEC13-208ENST00000397109 RPL7L1Q6DKI1 246 aaKnown RBP11.18□□□□□ -0.62
SEC13-208ENST00000397109 HSD17B13Q7Z5P4 300 aaPredicted RBP11.18□□□□□ -0.62
SEC13-208ENST00000397109 COMMD7Q86VX2 200 aa11.18□□□□□ -0.62
SEC13-208ENST00000397109 STX12Q86Y82 276 aa11.18□□□□□ -0.62
SEC13-208ENST00000397109 OR52E5Q8NH55 327 aa11.18□□□□□ -0.62
SEC13-208ENST00000397109 GINS3Q9BRX5 216 aa11.18□□□□□ -0.62
SEC13-208ENST00000397109 COMMD5Q9GZQ3 224 aa11.18□□□□□ -0.62
SEC13-208ENST00000397109 ZNF256Q9Y2P7 627 aaPredicted RBP11.18□□□□□ -0.62
SEC13-208ENST00000397109 DFFBO76075 338 aa11.17□□□□□ -0.62
SEC13-208ENST00000397109 PRH1P02810 166 aa11.17□□□□□ -0.62
SEC13-208ENST00000397109 HIST1H1BP16401 226 aaKnown RBP11.17□□□□□ -0.62
SEC13-208ENST00000397109 SULT1A1P50225 295 aa11.17□□□□□ -0.62
SEC13-208ENST00000397109 SULT1A2P50226 295 aa11.17□□□□□ -0.62
SEC13-208ENST00000397109 PAX9P55771 341 aa11.17□□□□□ -0.62
SEC13-208ENST00000397109 OR2B8PP59922 312 aa11.17□□□□□ -0.62
SEC13-208ENST00000397109 BLOC1S1P78537 153 aa11.17□□□□□ -0.62
SEC13-208ENST00000397109 DEFA5Q01523 94 aa11.17□□□□□ -0.62
SEC13-208ENST00000397109 KLF5Q13887 457 aaPredicted RBP11.17□□□□□ -0.62
SEC13-208ENST00000397109 CITED4Q96RK1 184 aa11.17□□□□□ -0.62
SEC13-208ENST00000397109 A0A1B0GW64 132 aa11.16□□□□□ -0.62
SEC13-208ENST00000397109 FAM24AA6NFZ4 105 aa11.16□□□□□ -0.62
SEC13-208ENST00000397109 RBMXL2O75526 392 aaKnown RBP11.16□□□□□ -0.62
SEC13-208ENST00000397109 OR2J3O76001 311 aa11.16□□□□□ -0.62
SEC13-208ENST00000397109 CTRB1P17538 263 aa11.16□□□□□ -0.62
SEC13-208ENST00000397109 NHLH2Q02577 135 aa11.16□□□□□ -0.62
SEC13-208ENST00000397109 TNFRSF9Q07011 255 aa11.16□□□□□ -0.62
SEC13-208ENST00000397109 RPEL1Q2QD12 228 aa11.16□□□□□ -0.62
SEC13-208ENST00000397109 KLK9Q2XQG4 91 aa11.16□□□□□ -0.62
SEC13-208ENST00000397109 CTRB2Q6GPI1 263 aa11.16□□□□□ -0.62
SEC13-208ENST00000397109 PRR25Q96S07 402 aa11.16□□□□□ -0.62
SEC13-208ENST00000397109 QTRT1Q9BXR0 403 aaKnown RBP11.16□□□□□ -0.62
SEC13-208ENST00000397109 TMEM14BQ9NUH8 114 aa11.16□□□□□ -0.62
SEC13-208ENST00000397109 FBXL7Q9UJT9 491 aa11.16□□□□□ -0.62
SEC13-208ENST00000397109 KLK9Q9UKQ9 250 aa11.16□□□□□ -0.62
SEC13-208ENST00000397109 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.15□□□□□ -0.62
SEC13-208ENST00000397109 TRAV3A0A0B4J244 114 aa11.15□□□□□ -0.62
SEC13-208ENST00000397109 RAB19A4D1S5 217 aa11.15□□□□□ -0.62
SEC13-208ENST00000397109 MFSD2BA6NFX1 497 aa11.15□□□□□ -0.62
SEC13-208ENST00000397109 C15orf61A6NNL5 157 aa11.15□□□□□ -0.62
SEC13-208ENST00000397109 SPP1P10451 314 aa11.15□□□□□ -0.62
SEC13-208ENST00000397109 DEFA4P12838 97 aa11.15□□□□□ -0.62
SEC13-208ENST00000397109 AREGP15514 252 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms