RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 CACNG5Q9UF02 275 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 SHPKQ9UHJ6 478 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 V9GYH0 126 aa10.47□□□□□ -0.73
SEC13-204ENST00000397099 TRAV14DV4A0A0A6YYC5 116 aa10.46□□□□□ -0.73
SEC13-204ENST00000397099 A0A0G2JRQ6 117 aa10.46□□□□□ -0.73
SEC13-204ENST00000397099 OR4C46A6NHA9 309 aa10.46□□□□□ -0.73
SEC13-204ENST00000397099 YIF1AO95070 293 aa10.46□□□□□ -0.73
SEC13-204ENST00000397099 SCAF4O95104 1147 aaKnown RBP10.46□□□□□ -0.73
SEC13-204ENST00000397099 RNASE2P10153 161 aaKnown RBP10.46□□□□□ -0.73
SEC13-204ENST00000397099 AKR1C4P17516 323 aa10.46□□□□□ -0.73
SEC13-204ENST00000397099 OPRK1P41145 380 aa10.46□□□□□ -0.73
SEC13-204ENST00000397099 CCR6P51684 374 aa10.46□□□□□ -0.73
SEC13-204ENST00000397099 TMEM187Q14656 261 aa10.46□□□□□ -0.73
SEC13-204ENST00000397099 TMEM128Q5BJH2 165 aa10.46□□□□□ -0.73
SEC13-204ENST00000397099 ETFRF1Q6IPR1 90 aa10.46□□□□□ -0.73
SEC13-204ENST00000397099 ZNF600Q6ZNG1 722 aa10.46□□□□□ -0.73
SEC13-204ENST00000397099 LHFPL5Q8TAF8 219 aa10.46□□□□□ -0.73
SEC13-204ENST00000397099 TMEM231Q9H6L2 316 aa10.46□□□□□ -0.73
SEC13-204ENST00000397099 SRD5A3Q9H8P0 318 aa10.46□□□□□ -0.73
SEC13-204ENST00000397099 SMPXQ9UHP9 88 aa10.46□□□□□ -0.73
SEC13-204ENST00000397099 IGHV7-4-1A0A0J9YVY3 117 aa10.45□□□□□ -0.74
SEC13-204ENST00000397099 CEBPZOSA8MTT3 80 aa10.45□□□□□ -0.74
SEC13-204ENST00000397099 SLC25A4P12235 298 aa10.45□□□□□ -0.74
SEC13-204ENST00000397099 LYL1P12980 280 aa10.45□□□□□ -0.74
SEC13-204ENST00000397099 EDN2P20800 178 aa10.45□□□□□ -0.74
SEC13-204ENST00000397099 C2orf83Q53S99 150 aa10.45□□□□□ -0.74
SEC13-204ENST00000397099 SPINK9Q5DT21 86 aa10.45□□□□□ -0.74
SEC13-204ENST00000397099 Q6ZRM9 215 aa10.45□□□□□ -0.74
SEC13-204ENST00000397099 DEFB125Q8N687 156 aa10.45□□□□□ -0.74
SEC13-204ENST00000397099 TMEM116Q8NCL8 245 aa10.45□□□□□ -0.74
SEC13-204ENST00000397099 OR4X1Q8NH49 305 aa10.45□□□□□ -0.74
SEC13-204ENST00000397099 TMEM230Q96A57 120 aa10.45□□□□□ -0.74
SEC13-204ENST00000397099 GPR146Q96CH1 333 aa10.45□□□□□ -0.74
SEC13-204ENST00000397099 U3KQ87 197 aa10.45□□□□□ -0.74
SEC13-204ENST00000397099 A0A1B0GU03 582 aa10.44□□□□□ -0.74
SEC13-204ENST00000397099 A0A1W2PS18 150 aa10.44□□□□□ -0.74
SEC13-204ENST00000397099 NAP1L6A6NFF2 107 aa10.44□□□□□ -0.74
SEC13-204ENST00000397099 CLN5O75503 358 aa10.44□□□□□ -0.74
SEC13-204ENST00000397099 TMEM50AO95807 157 aa10.44□□□□□ -0.74
SEC13-204ENST00000397099 INPP1P49441 399 aa10.44□□□□□ -0.74
SEC13-204ENST00000397099 UBE2MP61081 183 aaKnown RBP10.44□□□□□ -0.74
SEC13-204ENST00000397099 PAFAH1B2P68402 229 aa10.44□□□□□ -0.74
SEC13-204ENST00000397099 SMCO1Q147U7 214 aa10.44□□□□□ -0.74
SEC13-204ENST00000397099 ZNF79Q15937 498 aa10.44□□□□□ -0.74
SEC13-204ENST00000397099 NMSQ5H8A3 153 aa10.44□□□□□ -0.74
SEC13-204ENST00000397099 CASC10Q5T4H9 136 aa10.44□□□□□ -0.74
SEC13-204ENST00000397099 SLC24A4Q8NFF2 622 aa10.44□□□□□ -0.74
SEC13-204ENST00000397099 IL17DQ8TAD2 202 aa10.44□□□□□ -0.74
SEC13-204ENST00000397099 NARS2Q96I59 477 aaKnown RBP10.44□□□□□ -0.74
SEC13-204ENST00000397099 RHPN1-AS1Q9BWJ2 59 aa10.44□□□□□ -0.74
SEC13-204ENST00000397099 LOC102724200A0A096LPH7 203 aaPredicted RBP10.43□□□□□ -0.74
SEC13-204ENST00000397099 CHEK1O14757 476 aa10.43□□□□□ -0.74
SEC13-204ENST00000397099 SLC25A6P12236 298 aa10.43□□□□□ -0.74
SEC13-204ENST00000397099 SUPT4H1P63272 117 aaKnown RBP10.43□□□□□ -0.74
SEC13-204ENST00000397099 TNFRSF9Q07011 255 aa10.43□□□□□ -0.74
SEC13-204ENST00000397099 RBMS2Q15434 407 aaKnown RBP10.43□□□□□ -0.74
SEC13-204ENST00000397099 LRTM2Q8N967 370 aa10.43□□□□□ -0.74
SEC13-204ENST00000397099 GGTLC1Q9BX51 225 aa10.43□□□□□ -0.74
SEC13-204ENST00000397099 HSPB7Q9UBY9 170 aa10.43□□□□□ -0.74
SEC13-204ENST00000397099 RBMY1BA6NDE4 496 aaKnown RBP10.42□□□□□ -0.74
SEC13-204ENST00000397099 RBMY1EA6NEQ0 496 aaKnown RBP10.42□□□□□ -0.74
SEC13-204ENST00000397099 CENPXA8MT69 81 aa10.42□□□□□ -0.74
SEC13-204ENST00000397099 FAM90A26D6RGX4 464 aa10.42□□□□□ -0.74
SEC13-204ENST00000397099 UBE2CO00762 179 aa10.42□□□□□ -0.74
SEC13-204ENST00000397099 RBMY1DP0C7P1 496 aaKnown RBP10.42□□□□□ -0.74
SEC13-204ENST00000397099 NPY1RP25929 384 aa10.42□□□□□ -0.74
SEC13-204ENST00000397099 APOC4P55056 127 aa10.42□□□□□ -0.74
SEC13-204ENST00000397099 CNPY1Q3B7I2 92 aa10.42□□□□□ -0.74
SEC13-204ENST00000397099 TRIQKQ629K1 86 aa10.42□□□□□ -0.74
SEC13-204ENST00000397099 TOMM20LQ6UXN7 152 aa10.42□□□□□ -0.74
SEC13-204ENST00000397099 TMED4Q7Z7H5 227 aa10.42□□□□□ -0.74
SEC13-204ENST00000397099 TMED3Q9Y3Q3 217 aa10.42□□□□□ -0.74
SEC13-204ENST00000397099 PUS1Q9Y606 427 aaKnown RBP eCLIP10.42□□□□□ -0.74
SEC13-204ENST00000397099 TRAV2A0A0B4J234 112 aa10.41□□□□□ -0.74
SEC13-204ENST00000397099 IGHV3-48P01763 117 aa10.41□□□□□ -0.74
SEC13-204ENST00000397099 NPPCP23582 126 aa10.41□□□□□ -0.74
SEC13-204ENST00000397099 ZFAND6Q6FIF0 208 aa10.41□□□□□ -0.74
SEC13-204ENST00000397099 LYZL2Q7Z4W2 148 aa10.41□□□□□ -0.74
SEC13-204ENST00000397099 CENPSQ8N2Z9 138 aa10.41□□□□□ -0.74
SEC13-204ENST00000397099 OR1S2Q8NGQ3 325 aa10.41□□□□□ -0.74
SEC13-204ENST00000397099 METTL26Q96S19 204 aa10.41□□□□□ -0.74
SEC13-204ENST00000397099 C7orf50Q9BRJ6 194 aaKnown RBP10.41□□□□□ -0.74
SEC13-204ENST00000397099 SRRQ9GZT4 340 aa10.41□□□□□ -0.74
SEC13-204ENST00000397099 FNDC4Q9H6D8 234 aaPredicted RBP10.41□□□□□ -0.74
SEC13-204ENST00000397099 VSIRQ9H7M9 311 aa10.41□□□□□ -0.74
SEC13-204ENST00000397099 CSMD3Q7Z407 3707 aa10.41□□□□□ -0.74
SEC13-204ENST00000397099 TENM2Q9NT68 2774 aa10.4□□□□□ -0.74
SEC13-204ENST00000397099 KIR2DL5BA0A0G2JN68 375 aa10.4□□□□□ -0.74
SEC13-204ENST00000397099 KIR2DL5BA0A0G2JPC4 375 aa10.4□□□□□ -0.74
SEC13-204ENST00000397099 ZNF207O43670 478 aaKnown RBP10.4□□□□□ -0.74
SEC13-204ENST00000397099 MED6O75586 246 aa10.4□□□□□ -0.74
SEC13-204ENST00000397099 IFNA10P01566 189 aa10.4□□□□□ -0.74
SEC13-204ENST00000397099 VAMP1P23763 118 aa10.4□□□□□ -0.74
SEC13-204ENST00000397099 EIF2B2P49770 351 aaKnown RBP10.4□□□□□ -0.74
SEC13-204ENST00000397099 YPEL3P61236 119 aaPredicted RBP10.4□□□□□ -0.74
SEC13-204ENST00000397099 RPP30P78346 268 aaKnown RBP10.4□□□□□ -0.74
SEC13-204ENST00000397099 KIR2DL5AQ8N109 375 aa10.4□□□□□ -0.74
SEC13-204ENST00000397099 OR1S1Q8NH92 325 aa10.4□□□□□ -0.74
SEC13-204ENST00000397099 KIR2DL5BQ8NHK3 375 aa10.4□□□□□ -0.74
SEC13-204ENST00000397099 DTD1Q8TEA8 209 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms