RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 ZNF385AQ96PM9 386 aaKnown RBP8.76□□□□□ -1.01
COL4A4-201ENST00000396625 PAX4O43316 350 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 RBMY1FQ15415 496 aaKnown RBP8.76□□□□□ -1.01
COL4A4-201ENST00000396625 KLF12Q9Y4X4 402 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 TRBV5-5A0A0J9YX44 114 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 LINC01465Q8N7H1 131 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 Q96M66 194 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 DLL3Q9NYJ7 618 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 ZNF415Q09FC8 603 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 ZIC1Q15915 447 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 ASCL2Q99929 193 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 FAM60AQ9NP50 221 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 RPRMQ9NS64 109 aa8.76□□□□□ -1.01
COL4A4-201ENST00000396625 HIST1H2BKO60814 126 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 HIST1H2BJP06899 126 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 ZNF708P17019 499 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 HIST1H2BOP23527 126 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 HIST1H2BBP33778 126 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 HIST1H2BDP58876 126 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 HIST1H2BCP62807 126 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 HIST2H2BEQ16778 126 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.75□□□□□ -1.01
COL4A4-201ENST00000396625 ZNF721Q8TF20 911 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 HIST1H2BHQ93079 126 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 HIST1H2BNQ99877 126 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 HIST1H2BMQ99879 126 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.75□□□□□ -1.01
COL4A4-201ENST00000396625 COX14Q96I36 57 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 SIRT4Q9Y6E7 314 aaPredicted RBP8.75□□□□□ -1.01
COL4A4-201ENST00000396625 INS-IGF2F8WCM5 200 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 INSP01308 110 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 ATP5L2Q7Z4Y8 100 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 ARPC1AQ92747 370 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 JPT1Q9UK76 154 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 A8MXK9 166 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 IGFBP2P18065 325 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 FAM90A2PQ658T7 463 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 TMEM170AQ8WVE7 144 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 DRD3P35462 400 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 TMEM167AQ8TBQ9 72 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 TET2Q6N021 2002 aaPredicted RBP8.75□□□□□ -1.01
COL4A4-201ENST00000396625 IGHV3OR16-10A0A075B7F0 116 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 NCR2O95944 276 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 HLA-DQB1P01920 261 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 GNG5P63218 68 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 GNB1LQ9BYB4 327 aa8.75□□□□□ -1.01
COL4A4-201ENST00000396625 TBX6O95947 436 aaPredicted RBP8.74□□□□□ -1.01
COL4A4-201ENST00000396625 GLMPQ8WWB7 406 aa8.74□□□□□ -1.01
COL4A4-201ENST00000396625 UBE2CO00762 179 aa8.74□□□□□ -1.01
COL4A4-201ENST00000396625 ZNHIT1O43257 154 aa8.74□□□□□ -1.01
COL4A4-201ENST00000396625 ALPK3Q96L96 1907 aa8.74□□□□□ -1.01
COL4A4-201ENST00000396625 IFITM3Q01628 133 aa8.74□□□□□ -1.01
COL4A4-201ENST00000396625 ADARB2-AS1A8MUL3 147 aa8.74□□□□□ -1.01
COL4A4-201ENST00000396625 FBXL7Q9UJT9 491 aa8.74□□□□□ -1.01
COL4A4-201ENST00000396625 DRAM1Q8N682 238 aa8.74□□□□□ -1.01
COL4A4-201ENST00000396625 DNAJC30Q96LL9 226 aa8.74□□□□□ -1.01
COL4A4-201ENST00000396625 RNF115Q9Y4L5 304 aa8.74□□□□□ -1.01
COL4A4-201ENST00000396625 PPBPP02775 128 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 ZAR1Q86SH2 424 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 STHQ8IWL8 128 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 OTORQ9NRC9 128 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 GZMBP10144 247 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 FOXL1Q12952 345 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 CSPG4Q6UVK1 2322 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 TRGV4A0A0C4DH28 118 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 SRP19P09132 144 aaKnown RBP8.73□□□□□ -1.01
COL4A4-201ENST00000396625 SLC25A38Q96DW6 304 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 C21orf62Q9NYP8 219 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 PRR33A8MZF0 331 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 CD33P20138 364 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 ZNF625Q96I27 306 aaPredicted RBP8.73□□□□□ -1.01
COL4A4-201ENST00000396625 LHFPL6Q9Y693 200 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 IGHV3OR16-8A0A075B7F1 116 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 A0A1W2PRX2 142 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 CD300EQ496F6 205 aaPredicted RBP8.73□□□□□ -1.01
COL4A4-201ENST00000396625 CD5LO43866 347 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 IGKV1D-33P01593 117 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 IGKV1-33P01594 117 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 FAM214BQ7L5A3 538 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 NAA38Q9BRA0 125 aaKnown RBP8.73□□□□□ -1.01
COL4A4-201ENST00000396625 IFI27L2Q9H2X8 130 aa8.73□□□□□ -1.01
COL4A4-201ENST00000396625 MRPS18AQ9NVS2 196 aaKnown RBP8.73□□□□□ -1.01
COL4A4-201ENST00000396625 ASPHD2Q6ICH7 369 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 KLF14Q8TD94 323 aaPredicted RBP8.72□□□□□ -1.01
COL4A4-201ENST00000396625 CHCHD5Q9BSY4 110 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 A0A0G2JMM0 328 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 A0A1W2PPB8 328 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 KIR3DP1A8MWS1 328 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 ATP5G3P48201 142 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 TNRC6BQ9UPQ9 1833 aaKnown RBP8.72□□□□□ -1.01
COL4A4-201ENST00000396625 DTX4Q9Y2E6 619 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 SELENOKQ9Y6D0 94 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 TRAV8-3A0A0A6YYJ7 113 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 PMVKQ15126 192 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 Q5BKY6 102 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 DTX1Q86Y01 620 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 UCP3P55916 312 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 ZP1P60852 638 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 IFI27L1Q96BM0 104 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 IGHV1OR15-9A0A0B4J2B8 117 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms