RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 PHOX2AO14813 284 aa9.36□□□□□ -0.91
PDXDC1-202ENST00000396410 GGCTO75223 188 aaKnown RBP9.36□□□□□ -0.91
PDXDC1-202ENST00000396410 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
PDXDC1-202ENST00000396410 FXYD3Q14802 87 aa9.36□□□□□ -0.91
PDXDC1-202ENST00000396410 NHLRC2Q8NBF2 726 aa9.36□□□□□ -0.91
PDXDC1-202ENST00000396410 TNFRSF14Q92956 283 aa9.36□□□□□ -0.91
PDXDC1-202ENST00000396410 WT1-ASQ06250 92 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 OR8I2Q8N0Y5 310 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 TEX45Q8NA69 505 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 TPSG1Q9NRR2 321 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 NAT8BQ9UHF3 227 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 TCRBV4S1A1TA0A5B7 111 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 ZNF705FA8MVS1 300 aaPredicted RBP9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 LY6HO94772 140 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 ZNF705DP0CH99 300 aaPredicted RBP9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 ZNF705BP0CI00 300 aaPredicted RBP9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 SLC25A33Q9BSK2 321 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 IL36BQ9NZH7 164 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 CORTO00230 105 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 PYYP10082 97 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 AREGP15514 252 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 HTR1DP28221 377 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 PYY3Q5JQD4 70 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 C9orf152Q5JTZ5 239 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 STXBP6Q8NFX7 210 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 ZNF331Q9NQX6 463 aaPredicted RBP9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 TNCP24821 2201 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 IGHV1-3A0A0C4DH29 117 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 NCBP2LA6PVI3 153 aaKnown RBP9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 SNURFLB1AK76 121 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 LINC00587B1AMM8 73 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 HYPMO75409 117 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 SLC35B1P78383 322 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 IBA57Q5T440 356 aaKnown RBP9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 CMTM2Q8TAZ6 248 aa9.35□□□□□ -0.91
PDXDC1-202ENST00000396410 RAI1Q7Z5J4 1906 aaPredicted RBP9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 A0A1W2PPI3 338 aa9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 FOXL1Q12952 345 aa9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 PRSS8Q16651 343 aa9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 PPP1R27Q86WC6 154 aa9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 DMRTC2Q8IXT2 367 aaPredicted RBP9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 DAZAP1Q96EP5 407 aaKnown RBP9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 PRO1933Q9H354 126 aa9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 IMMP2LQ96T52 175 aa9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 HIST1H2BLQ99880 126 aa9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 A0A1W2PRE2 83 aa9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 BUB1B-PAK6H3BSN5 160 aa9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 HIST1H1BP16401 226 aaKnown RBP9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 CBLN1P23435 193 aa9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 ACTL10Q5JWF8 245 aa9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 C8orf31Q8N9H6 132 aa9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 ST6GALNAC3Q8NDV1 305 aa9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 RASL11BQ9BPW5 248 aa9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 COL25A1Q9BXS0 654 aaPredicted RBP9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 LOC400499M0QZD8 3231 aa9.34□□□□□ -0.91
PDXDC1-202ENST00000396410 ANKRD11Q6UB99 2663 aaPredicted RBP9.34□□□□□ -0.92
PDXDC1-202ENST00000396410 IGKV1OR2-108A0A075B7D4 117 aa9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 C9JCJ5 164 aa9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 CRISP2P16562 243 aa9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 CNTFRP26992 372 aa9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 E7EUB6 86 aa9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 GATCO43716 136 aaKnown RBP9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 TOX4O94842 621 aa9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 MRPL54Q6P161 138 aaKnown RBP9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 RNASE7Q9H1E1 156 aaKnown RBP9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 DMRT1Q9Y5R6 373 aa9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 DSPP15924 2871 aaKnown RBP9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 ABCA4P78363 2273 aa9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 PTPRQQ9UMZ3 2332 aa9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 LOC105371242A0A075B767 164 aa9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 MRPL18Q9H0U6 180 aaKnown RBP9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 RITA1Q96K30 269 aa9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 PYGO2Q9BRQ0 406 aa9.33□□□□□ -0.92
PDXDC1-202ENST00000396410 COL6A6A6NMZ7 2263 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 MALRD1Q5VYJ5 2156 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 GRIFINA4D1Z8 144 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 SSBP2P81877 361 aaPredicted RBP9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 CBLN4Q9NTU7 201 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 SIGLEC9Q9Y336 463 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 CEP295Q9C0D2 2601 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 TRAV34A0A0B4J273 112 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 PGPA6NDG6 321 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 GPR6P46095 362 aaPredicted RBP9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 WDR73Q6P4I2 378 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 LHFPL4Q7Z7J7 247 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 CHODLQ9H9P2 273 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 UBTD1Q9HAC8 227 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 HIGD1AQ9Y241 93 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 TANC2Q9HCD6 1990 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 H3BTX0 84 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 USF2Q15853 346 aaPredicted RBP9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 SRSF12Q8WXF0 261 aaKnown RBP9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 C1orf159Q96HA4 380 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 SGK494Q96LW2 274 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 FNDC4Q9H6D8 234 aaPredicted RBP9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 DPM3Q9P2X0 92 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 ARL2-SNX15V9GYD0 113 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 MGAQ8IWI9 3026 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 SCGB2A1O75556 95 aa9.32□□□□□ -0.92
PDXDC1-202ENST00000396410 MS4A10Q96PG2 267 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms