RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 GPR146Q96CH1 333 aa13.53□□□□□ -0.24
FXN-203ENST00000396366 C6orf62Q9GZU0 229 aaPredicted RBP13.53□□□□□ -0.24
FXN-203ENST00000396366 CCDC59Q9P031 241 aaKnown RBP13.53□□□□□ -0.24
FXN-203ENST00000396366 PUS1Q9Y606 427 aaKnown RBP eCLIP13.53□□□□□ -0.24
FXN-203ENST00000396366 A0A0J9YWU9 116 aa13.52□□□□□ -0.25
FXN-203ENST00000396366 SPRY2O43597 315 aa13.52□□□□□ -0.25
FXN-203ENST00000396366 SUB1P53999 127 aaKnown RBP eCLIP13.52□□□□□ -0.25
FXN-203ENST00000396366 TCF24Q7RTU0 167 aa13.52□□□□□ -0.25
FXN-203ENST00000396366 WFDC3Q8IUB2 231 aa13.52□□□□□ -0.25
FXN-203ENST00000396366 SLIRPQ9GZT3 109 aaKnown RBP13.52□□□□□ -0.25
FXN-203ENST00000396366 ENY2Q9NPA8 101 aa13.52□□□□□ -0.25
FXN-203ENST00000396366 ALMS1Q8TCU4 4167 aa13.52□□□□□ -0.25
FXN-203ENST00000396366 CRYM-AS1A6NIL9 109 aa13.51□□□□□ -0.25
FXN-203ENST00000396366 B3GALNT1O75752 331 aa13.51□□□□□ -0.25
FXN-203ENST00000396366 SURF2Q15527 256 aaPredicted RBP13.51□□□□□ -0.25
FXN-203ENST00000396366 BSXQ3C1V8 233 aa13.51□□□□□ -0.25
FXN-203ENST00000396366 TMEM268Q5VZI3 342 aa13.51□□□□□ -0.25
FXN-203ENST00000396366 ZNF600Q6ZNG1 722 aa13.51□□□□□ -0.25
FXN-203ENST00000396366 Q6ZWC4 215 aa13.51□□□□□ -0.25
FXN-203ENST00000396366 STPG3Q8N7X2 389 aa13.51□□□□□ -0.25
FXN-203ENST00000396366 RBPMSQ93062 196 aaKnown RBP13.51□□□□□ -0.25
FXN-203ENST00000396366 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.51□□□□□ -0.25
FXN-203ENST00000396366 CACNG5Q9UF02 275 aa13.51□□□□□ -0.25
FXN-203ENST00000396366 ANKRD20A5PA0PJZ0 165 aa13.5□□□□□ -0.25
FXN-203ENST00000396366 H3BMQ9 156 aa13.5□□□□□ -0.25
FXN-203ENST00000396366 GSTZ1O43708 216 aaPredicted RBP13.5□□□□□ -0.25
FXN-203ENST00000396366 DFFBO76075 338 aa13.5□□□□□ -0.25
FXN-203ENST00000396366 NXPH3O95157 252 aa13.5□□□□□ -0.25
FXN-203ENST00000396366 TNFSF8P32971 234 aa13.5□□□□□ -0.25
FXN-203ENST00000396366 OPRK1P41145 380 aa13.5□□□□□ -0.25
FXN-203ENST00000396366 SPCS3P61009 180 aa13.5□□□□□ -0.25
FXN-203ENST00000396366 DHODHQ02127 395 aa13.5□□□□□ -0.25
FXN-203ENST00000396366 AARDQ4LEZ3 155 aa13.5□□□□□ -0.25
FXN-203ENST00000396366 TMEM230Q96A57 120 aa13.5□□□□□ -0.25
FXN-203ENST00000396366 GALNT14Q96FL9 552 aa13.5□□□□□ -0.25
FXN-203ENST00000396366 SOSTQ9BQB4 213 aa13.5□□□□□ -0.25
FXN-203ENST00000396366 VSIRQ9H7M9 311 aa13.5□□□□□ -0.25
FXN-203ENST00000396366 MAP6D1Q9H9H5 199 aa13.5□□□□□ -0.25
FXN-203ENST00000396366 KIR2DL5BA0A0G2JN68 375 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 KIR2DL5BA0A0G2JPC4 375 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 CLN5O75503 358 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 RPL5P46777 297 aaKnown RBP13.49□□□□□ -0.25
FXN-203ENST00000396366 TIGITQ495A1 244 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 LYG2Q86SG7 212 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 FAM219AQ8IW50 185 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 KIR2DL5AQ8N109 375 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 FAM24BQ8N5W8 94 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 OR4X1Q8NH49 305 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 OR52E5Q8NH55 327 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 KIR2DL5BQ8NHK3 375 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 RNF183Q96D59 192 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 PRRT1Q99946 306 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 BCL7BQ9BQE9 202 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 GINS3Q9BRX5 216 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 MS4A6AQ9H2W1 248 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 HEYLQ9NQ87 328 aaPredicted RBP13.49□□□□□ -0.25
FXN-203ENST00000396366 TP53TG1Q9Y2A0 90 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 TMEM56-RWDD3S4R434 201 aa13.49□□□□□ -0.25
FXN-203ENST00000396366 FABP12A6NFH5 140 aa13.48□□□□□ -0.25
FXN-203ENST00000396366 CORTO00230 105 aa13.48□□□□□ -0.25
FXN-203ENST00000396366 UBE2CO00762 179 aa13.48□□□□□ -0.25
FXN-203ENST00000396366 BMI1P35226 326 aa13.48□□□□□ -0.25
FXN-203ENST00000396366 TMEM187Q14656 261 aa13.48□□□□□ -0.25
FXN-203ENST00000396366 TMEM170AQ8WVE7 144 aa13.48□□□□□ -0.25
FXN-203ENST00000396366 RSL24D1Q9UHA3 163 aaKnown RBP13.48□□□□□ -0.25
FXN-203ENST00000396366 IGKV1-17P01599 117 aa13.47□□□□□ -0.25
FXN-203ENST00000396366 RPL11P62913 178 aaKnown RBP13.47□□□□□ -0.25
FXN-203ENST00000396366 PMS2P11Q13670 270 aa13.47□□□□□ -0.25
FXN-203ENST00000396366 MCFD2Q8NI22 146 aa13.47□□□□□ -0.25
FXN-203ENST00000396366 MCUBQ9NWR8 336 aa13.47□□□□□ -0.25
FXN-203ENST00000396366 RABL2AQ9UBK7 228 aaPredicted RBP13.47□□□□□ -0.25
FXN-203ENST00000396366 RABL2BQ9UNT1 228 aa13.47□□□□□ -0.25
FXN-203ENST00000396366 CEBPZOSA8MTT3 80 aa13.46□□□□□ -0.25
FXN-203ENST00000396366 AKR1C4P17516 323 aa13.46□□□□□ -0.25
FXN-203ENST00000396366 NPPCP23582 126 aa13.46□□□□□ -0.25
FXN-203ENST00000396366 HTR2BP41595 481 aa13.46□□□□□ -0.25
FXN-203ENST00000396366 PAFAH1B2P68402 229 aa13.46□□□□□ -0.25
FXN-203ENST00000396366 TNFRSF9Q07011 255 aa13.46□□□□□ -0.25
FXN-203ENST00000396366 LEMD1Q68G75 181 aa13.46□□□□□ -0.25
FXN-203ENST00000396366 CSTL1Q9H114 145 aa13.46□□□□□ -0.25
FXN-203ENST00000396366 CXorf65A6NEN9 183 aa13.45□□□□□ -0.26
FXN-203ENST00000396366 DNASE2O00115 360 aaPredicted RBP13.45□□□□□ -0.26
FXN-203ENST00000396366 JTBO76095 146 aa13.45□□□□□ -0.26
FXN-203ENST00000396366 CMC4P56277 68 aaPredicted RBP13.45□□□□□ -0.26
FXN-203ENST00000396366 SUPT4H1P63272 117 aaKnown RBP13.45□□□□□ -0.26
FXN-203ENST00000396366 RBMS2Q15434 407 aaKnown RBP13.45□□□□□ -0.26
FXN-203ENST00000396366 C2orf83Q53S99 150 aa13.45□□□□□ -0.26
FXN-203ENST00000396366 PRSS54Q6PEW0 395 aa13.45□□□□□ -0.26
FXN-203ENST00000396366 LYZL2Q7Z4W2 148 aa13.45□□□□□ -0.26
FXN-203ENST00000396366 SCP2D1Q9UJQ7 156 aa13.45□□□□□ -0.26
FXN-203ENST00000396366 NOL3O60936 208 aaKnown RBP13.44□□□□□ -0.26
FXN-203ENST00000396366 CRYBB3P26998 211 aa13.44□□□□□ -0.26
FXN-203ENST00000396366 RND2P52198 227 aa13.44□□□□□ -0.26
FXN-203ENST00000396366 DEFB131AP59861 70 aa13.44□□□□□ -0.26
FXN-203ENST00000396366 SLC24A4Q8NFF2 622 aa13.44□□□□□ -0.26
FXN-203ENST00000396366 RABAC1Q9UI14 185 aa13.44□□□□□ -0.26
FXN-203ENST00000396366 KCNIP3Q9Y2W7 256 aa13.44□□□□□ -0.26
FXN-203ENST00000396366 MPTX1A8MV57 137 aa13.43□□□□□ -0.26
FXN-203ENST00000396366 CD5P06127 495 aa13.43□□□□□ -0.26
FXN-203ENST00000396366 IGLC1P0CG04 106 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms