RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 WFDC1Q9HC57 220 aa14.43□□□□□ -0.1
UBFD1-201ENST00000395878 NRN1Q9NPD7 142 aa14.43□□□□□ -0.1
UBFD1-201ENST00000395878 SMAD7O15105 426 aaKnown RBP14.43□□□□□ -0.1
UBFD1-201ENST00000395878 WDR90Q96KV7 1748 aa14.43□□□□□ -0.1
UBFD1-201ENST00000395878 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.42□□□□□ -0.1
UBFD1-201ENST00000395878 LINC00469Q8N7U9 141 aa14.42□□□□□ -0.1
UBFD1-201ENST00000395878 CDKN1AP38936 164 aa14.42□□□□□ -0.1
UBFD1-201ENST00000395878 PEMTQ9UBM1 199 aa14.42□□□□□ -0.1
UBFD1-201ENST00000395878 EFNB3Q15768 340 aa14.42□□□□□ -0.1
UBFD1-201ENST00000395878 GGNQ86UU5 652 aa14.42□□□□□ -0.1
UBFD1-201ENST00000395878 NAPSAO96009 420 aa14.41□□□□□ -0.1
UBFD1-201ENST00000395878 IGHV3-11P01762 117 aa14.41□□□□□ -0.1
UBFD1-201ENST00000395878 JKAMPQ9P055 326 aa14.41□□□□□ -0.1
UBFD1-201ENST00000395878 ADMP35318 185 aa14.41□□□□□ -0.1
UBFD1-201ENST00000395878 EMP1P54849 157 aa14.41□□□□□ -0.1
UBFD1-201ENST00000395878 NYNRINQ9P2P1 1898 aaKnown RBP14.41□□□□□ -0.1
UBFD1-201ENST00000395878 LINC00587B1AMM8 73 aa14.41□□□□□ -0.1
UBFD1-201ENST00000395878 TGFAP01135 160 aa14.41□□□□□ -0.1
UBFD1-201ENST00000395878 TFF1P04155 84 aa14.41□□□□□ -0.1
UBFD1-201ENST00000395878 FAM71F2Q6NXP2 309 aa14.41□□□□□ -0.1
UBFD1-201ENST00000395878 COLCA1Q6ZS62 124 aa14.41□□□□□ -0.1
UBFD1-201ENST00000395878 C17orf82Q86X59 251 aaPredicted RBP14.41□□□□□ -0.1
UBFD1-201ENST00000395878 ST6GALNAC6Q969X2 333 aa14.41□□□□□ -0.1
UBFD1-201ENST00000395878 A0A0G2JMZ2 1700 aa14.41□□□□□ -0.1
UBFD1-201ENST00000395878 LRRC37A2A6NM11 1700 aa14.41□□□□□ -0.1
UBFD1-201ENST00000395878 TMEM50AO95807 157 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 IGHV1-46P01743 117 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 THBDP07204 575 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 PYYP10082 97 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 MESP1Q9BRJ9 268 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 C19orf67A6NJJ6 358 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 E9PLN8 166 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 SNAI2O43623 268 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 LINC01587Q99440 93 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 VKORC1Q9BQB6 163 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 PSG8Q9UQ74 426 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 SRRM5B3KS81 715 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 LEPP41159 167 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 NPFFR1Q9GZQ6 430 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 LDLRAD4O15165 306 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 OR10J3Q5JRS4 329 aa14.4□□□□□ -0.1
UBFD1-201ENST00000395878 SCN8AQ9UQD0 1980 aa14.4□□□□□ -0.11
UBFD1-201ENST00000395878 MTURNQ8N3F0 131 aa14.39□□□□□ -0.11
UBFD1-201ENST00000395878 TMEM190Q8WZ59 177 aa14.39□□□□□ -0.11
UBFD1-201ENST00000395878 MDC1Q14676 2089 aaKnown RBP14.39□□□□□ -0.11
UBFD1-201ENST00000395878 OCC1Q8TAD7 63 aa14.39□□□□□ -0.11
UBFD1-201ENST00000395878 RPUSD1Q9UJJ7 312 aaKnown RBP14.39□□□□□ -0.11
UBFD1-201ENST00000395878 RHOGP84095 191 aa14.39□□□□□ -0.11
UBFD1-201ENST00000395878 ESPL1Q14674 2120 aa14.39□□□□□ -0.11
UBFD1-201ENST00000395878 GNB1LQ9BYB4 327 aa14.39□□□□□ -0.11
UBFD1-201ENST00000395878 ZNF257Q9Y2Q1 563 aa14.39□□□□□ -0.11
UBFD1-201ENST00000395878 GREB1Q4ZG55 1949 aa14.39□□□□□ -0.11
UBFD1-201ENST00000395878 XIRP1Q702N8 1843 aaKnown RBP14.39□□□□□ -0.11
UBFD1-201ENST00000395878 CACNA1EQ15878 2313 aa14.39□□□□□ -0.11
UBFD1-201ENST00000395878 PPBPP02775 128 aa14.38□□□□□ -0.11
UBFD1-201ENST00000395878 FAM166AQ6J272 317 aa14.38□□□□□ -0.11
UBFD1-201ENST00000395878 GVINP1Q7Z2Y8 2422 aa14.38□□□□□ -0.11
UBFD1-201ENST00000395878 TEX38Q6PEX7 206 aa14.38□□□□□ -0.11
UBFD1-201ENST00000395878 ZCCHC24Q8N2G6 241 aaKnown RBP14.38□□□□□ -0.11
UBFD1-201ENST00000395878 SSBP4Q9BWG4 385 aaPredicted RBP14.38□□□□□ -0.11
UBFD1-201ENST00000395878 TRAV21A0A0B4J279 112 aa14.38□□□□□ -0.11
UBFD1-201ENST00000395878 TIMM23O14925 209 aa14.38□□□□□ -0.11
UBFD1-201ENST00000395878 CD5P06127 495 aa14.38□□□□□ -0.11
UBFD1-201ENST00000395878 TIMP3P35625 211 aa14.38□□□□□ -0.11
UBFD1-201ENST00000395878 PLSCR4Q9NRQ2 329 aa14.38□□□□□ -0.11
UBFD1-201ENST00000395878 TMEM242Q9NWH2 141 aa14.38□□□□□ -0.11
UBFD1-201ENST00000395878 RTTNQ86VV8 2226 aa14.38□□□□□ -0.11
UBFD1-201ENST00000395878 CACNG7P62955 275 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 C8orf46Q8TAG6 207 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 RALGAPA1Q6GYQ0 2036 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 SDK2Q58EX2 2172 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 DUSP14O95147 198 aaKnown RBP14.37□□□□□ -0.11
UBFD1-201ENST00000395878 HBDP02042 147 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 TREML4Q6UXN2 200 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 NIT1Q86X76 327 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 ST20Q9HBF5 79 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 HIST1H2BKO60814 126 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 HIST1H2BJP06899 126 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 CD59P13987 128 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 HIST1H2BOP23527 126 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 HIST1H2BBP33778 126 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 HIST1H2BDP58876 126 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 HIST1H2BCP62807 126 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 HIST2H2BEQ16778 126 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.37□□□□□ -0.11
UBFD1-201ENST00000395878 HIST1H2BHQ93079 126 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 HIST1H2BNQ99877 126 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 HIST1H2BMQ99879 126 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 PRSS22Q9GZN4 317 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 NDUFA3O95167 84 aa14.37□□□□□ -0.11
UBFD1-201ENST00000395878 NXT2Q9NPJ8 142 aaKnown RBP14.37□□□□□ -0.11
UBFD1-201ENST00000395878 IGKV1-27A0A075B6S5 117 aa14.36□□□□□ -0.11
UBFD1-201ENST00000395878 A0A1B0GWB2 263 aa14.36□□□□□ -0.11
UBFD1-201ENST00000395878 FOXG1P55316 489 aaPredicted RBP14.36□□□□□ -0.11
UBFD1-201ENST00000395878 SUPT4H1P63272 117 aaKnown RBP14.36□□□□□ -0.11
UBFD1-201ENST00000395878 TMEM167AQ8TBQ9 72 aa14.36□□□□□ -0.11
UBFD1-201ENST00000395878 VSIRQ9H7M9 311 aa14.36□□□□□ -0.11
UBFD1-201ENST00000395878 TRAV1-1A0A0B4J248 108 aa14.36□□□□□ -0.11
UBFD1-201ENST00000395878 IL18BPO95998 194 aa14.36□□□□□ -0.11
UBFD1-201ENST00000395878 CD7P09564 240 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms