RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 CACNG8Q8WXS5 425 aa12.32□□□□□ -0.44
CPSF7-202ENST00000394888 H1FXQ92522 213 aaKnown RBP12.32□□□□□ -0.44
CPSF7-202ENST00000394888 GBGT1Q8N5D6 347 aa12.31□□□□□ -0.44
CPSF7-202ENST00000394888 OR5R1Q8NH85 324 aa12.31□□□□□ -0.44
CPSF7-202ENST00000394888 FXYD5Q96DB9 178 aa12.31□□□□□ -0.44
CPSF7-202ENST00000394888 NDUFB3O43676 98 aa12.31□□□□□ -0.44
CPSF7-202ENST00000394888 REG1AP05451 166 aa12.31□□□□□ -0.44
CPSF7-202ENST00000394888 OR5B12Q96R08 314 aa12.31□□□□□ -0.44
CPSF7-202ENST00000394888 WASHC3Q9Y3C0 194 aa12.31□□□□□ -0.44
CPSF7-202ENST00000394888 IGHV2-26A0A0B4J1V2 119 aa12.31□□□□□ -0.44
CPSF7-202ENST00000394888 OVOL3O00110 214 aa12.31□□□□□ -0.44
CPSF7-202ENST00000394888 APOBEC3AP31941 199 aaPredicted RBP12.31□□□□□ -0.44
CPSF7-202ENST00000394888 CENPWQ5EE01 88 aa12.31□□□□□ -0.44
CPSF7-202ENST00000394888 LINC00479Q96M42 142 aa12.31□□□□□ -0.44
CPSF7-202ENST00000394888 IL36BQ9NZH7 164 aa12.31□□□□□ -0.44
CPSF7-202ENST00000394888 F2Z2F3 143 aa12.3□□□□□ -0.44
CPSF7-202ENST00000394888 ADORA2A-AS1P86434 159 aa12.3□□□□□ -0.44
CPSF7-202ENST00000394888 C9orf152Q5JTZ5 239 aa12.3□□□□□ -0.44
CPSF7-202ENST00000394888 C8orf46Q8TAG6 207 aa12.3□□□□□ -0.44
CPSF7-202ENST00000394888 LINC01560Q8TB33 94 aa12.3□□□□□ -0.44
CPSF7-202ENST00000394888 UHRF2Q96PU4 802 aa12.3□□□□□ -0.44
CPSF7-202ENST00000394888 IGHV3-72A0A0B4J1Y9 119 aa12.3□□□□□ -0.44
CPSF7-202ENST00000394888 SLC25A17O43808 307 aa12.3□□□□□ -0.44
CPSF7-202ENST00000394888 GCGP01275 180 aa12.3□□□□□ -0.44
CPSF7-202ENST00000394888 PYYP10082 97 aa12.3□□□□□ -0.44
CPSF7-202ENST00000394888 IGFBPL1Q8WX77 278 aa12.3□□□□□ -0.44
CPSF7-202ENST00000394888 ENY2Q9NPA8 101 aa12.3□□□□□ -0.44
CPSF7-202ENST00000394888 PAX2Q02962 417 aa12.3□□□□□ -0.44
CPSF7-202ENST00000394888 LRRC10Q5BKY1 277 aa12.3□□□□□ -0.44
CPSF7-202ENST00000394888 LY6G5BQ8NDX9 201 aa12.3□□□□□ -0.44
CPSF7-202ENST00000394888 A0A0U1RQK1 487 aa12.29□□□□□ -0.44
CPSF7-202ENST00000394888 ZNF320A2RRD8 509 aa12.29□□□□□ -0.44
CPSF7-202ENST00000394888 PPOXP50336 477 aa12.29□□□□□ -0.44
CPSF7-202ENST00000394888 Q71RC1 249 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-202ENST00000394888 RNF114Q9Y508 228 aa12.29□□□□□ -0.44
CPSF7-202ENST00000394888 APOA2P02652 100 aa12.29□□□□□ -0.44
CPSF7-202ENST00000394888 S100A2P29034 98 aa12.29□□□□□ -0.44
CPSF7-202ENST00000394888 HCP5Q6MZN7 132 aa12.29□□□□□ -0.44
CPSF7-202ENST00000394888 LHFPL4Q7Z7J7 247 aa12.29□□□□□ -0.44
CPSF7-202ENST00000394888 OR10X1Q8NGY0 326 aa12.29□□□□□ -0.44
CPSF7-202ENST00000394888 MBD6Q96DN6 1003 aa12.29□□□□□ -0.44
CPSF7-202ENST00000394888 RNASE7Q9H1E1 156 aaKnown RBP12.29□□□□□ -0.44
CPSF7-202ENST00000394888 COL12A1Q99715 3063 aa12.29□□□□□ -0.44
CPSF7-202ENST00000394888 TCRBV4S1A1TA0A5B7 111 aa12.29□□□□□ -0.44
CPSF7-202ENST00000394888 SSX2Q16385 188 aa12.29□□□□□ -0.44
CPSF7-202ENST00000394888 SSX8Q7RTT4 187 aa12.29□□□□□ -0.44
CPSF7-202ENST00000394888 FAM168AQ92567 244 aa12.29□□□□□ -0.44
CPSF7-202ENST00000394888 CNN1P51911 297 aaKnown RBP12.28□□□□□ -0.44
CPSF7-202ENST00000394888 CRYBG3Q68DQ2 2970 aa12.28□□□□□ -0.44
CPSF7-202ENST00000394888 ZNF329Q86UD4 541 aa12.28□□□□□ -0.44
CPSF7-202ENST00000394888 ST6GALNAC3Q8NDV1 305 aa12.28□□□□□ -0.44
CPSF7-202ENST00000394888 NPIPB3Q92617 1050 aa12.28□□□□□ -0.44
CPSF7-202ENST00000394888 TECRQ9NZ01 308 aaKnown RBP12.28□□□□□ -0.44
CPSF7-202ENST00000394888 A0A1W2PRE2 83 aa12.28□□□□□ -0.44
CPSF7-202ENST00000394888 BUB1B-PAK6H3BSN5 160 aa12.28□□□□□ -0.44
CPSF7-202ENST00000394888 C14orf144Q96I85 54 aa12.28□□□□□ -0.44
CPSF7-202ENST00000394888 C19orf24Q9BVV8 132 aa12.28□□□□□ -0.44
CPSF7-202ENST00000394888 IGF2RP11717 2491 aa12.28□□□□□ -0.44
CPSF7-202ENST00000394888 MAP1BP46821 2468 aaKnown RBP12.28□□□□□ -0.44
CPSF7-202ENST00000394888 C8orf88P0DMB2 117 aa12.27□□□□□ -0.44
CPSF7-202ENST00000394888 CBLN1P23435 193 aa12.27□□□□□ -0.44
CPSF7-202ENST00000394888 C11orf71Q6IPW1 123 aa12.27□□□□□ -0.44
CPSF7-202ENST00000394888 PQLC2Q6ZP29 291 aa12.27□□□□□ -0.44
CPSF7-202ENST00000394888 IGHV1-3A0A0C4DH29 117 aa12.27□□□□□ -0.45
CPSF7-202ENST00000394888 B9A039 149 aa12.27□□□□□ -0.45
CPSF7-202ENST00000394888 ESDP10768 282 aa12.27□□□□□ -0.45
CPSF7-202ENST00000394888 CA7P43166 264 aa12.27□□□□□ -0.45
CPSF7-202ENST00000394888 COMMD5Q9GZQ3 224 aa12.27□□□□□ -0.45
CPSF7-202ENST00000394888 VWC2LB2RUY7 222 aa12.27□□□□□ -0.45
CPSF7-202ENST00000394888 LY6HO94772 140 aa12.27□□□□□ -0.45
CPSF7-202ENST00000394888 RAB4BP61018 213 aa12.27□□□□□ -0.45
CPSF7-202ENST00000394888 TGIF2LXQ8IUE1 241 aa12.27□□□□□ -0.45
CPSF7-202ENST00000394888 ZNF664Q8N3J9 261 aa12.27□□□□□ -0.45
CPSF7-202ENST00000394888 TMEM167BQ9NRX6 74 aa12.27□□□□□ -0.45
CPSF7-202ENST00000394888 SIGLEC9Q9Y336 463 aa12.27□□□□□ -0.45
CPSF7-202ENST00000394888 COMPP49747 757 aaPredicted RBP12.26□□□□□ -0.45
CPSF7-202ENST00000394888 ZNF672Q499Z4 452 aaPredicted RBP12.26□□□□□ -0.45
CPSF7-202ENST00000394888 KCNIP4Q6PIL6 250 aa12.26□□□□□ -0.45
CPSF7-202ENST00000394888 MRPL32Q9BYC8 188 aaKnown RBP12.26□□□□□ -0.45
CPSF7-202ENST00000394888 ZNF355PQ9NSJ1 428 aa12.26□□□□□ -0.45
CPSF7-202ENST00000394888 A0A1W2PPR1 153 aa12.26□□□□□ -0.45
CPSF7-202ENST00000394888 FCN1O00602 326 aa12.26□□□□□ -0.45
CPSF7-202ENST00000394888 SMIM27A0A1W2PRY6 76 aa12.26□□□□□ -0.45
CPSF7-202ENST00000394888 RAB31Q13636 194 aa12.26□□□□□ -0.45
CPSF7-202ENST00000394888 BEND2Q8NDZ0 799 aa12.26□□□□□ -0.45
CPSF7-202ENST00000394888 ZNF414Q96IQ9 312 aa12.26□□□□□ -0.45
CPSF7-202ENST00000394888 DNAJC4Q9NNZ3 241 aa12.26□□□□□ -0.45
CPSF7-202ENST00000394888 TRAPPC1Q9Y5R8 145 aa12.26□□□□□ -0.45
CPSF7-202ENST00000394888 A0A1W2PN81 502 aa12.25□□□□□ -0.45
CPSF7-202ENST00000394888 TMEM116Q8NCL8 245 aa12.25□□□□□ -0.45
CPSF7-202ENST00000394888 CFHR4Q92496 578 aa12.25□□□□□ -0.45
CPSF7-202ENST00000394888 MDFIC2A0A1B0GVS7 189 aa12.25□□□□□ -0.45
CPSF7-202ENST00000394888 ZNF785A8K8V0 405 aa12.25□□□□□ -0.45
CPSF7-202ENST00000394888 TEX45Q8NA69 505 aa12.25□□□□□ -0.45
CPSF7-202ENST00000394888 RALYQ9UKM9 306 aaKnown RBP12.25□□□□□ -0.45
CPSF7-202ENST00000394888 TRAV9-1A0A075B6T8 112 aa12.25□□□□□ -0.45
CPSF7-202ENST00000394888 GRIFINA4D1Z8 144 aa12.25□□□□□ -0.45
CPSF7-202ENST00000394888 GP9P14770 177 aa12.25□□□□□ -0.45
CPSF7-202ENST00000394888 GDF5OSQ5U4N7 250 aa12.25□□□□□ -0.45
CPSF7-202ENST00000394888 MMD2Q8IY49 270 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms