RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TNFSF13O75888 250 aa10.9□□□□□ -0.66
NFKB1-202ENST00000394820 CCL3L1P16619 93 aa10.9□□□□□ -0.66
NFKB1-202ENST00000394820 STPG4Q8N801 248 aa10.9□□□□□ -0.66
NFKB1-202ENST00000394820 YPEL4Q96NS1 127 aa10.9□□□□□ -0.66
NFKB1-202ENST00000394820 HIGD1CA8MV81 97 aa10.9□□□□□ -0.66
NFKB1-202ENST00000394820 MKRN2OSH3BPM6 223 aa10.9□□□□□ -0.66
NFKB1-202ENST00000394820 RPL24P83731 157 aaKnown RBP10.9□□□□□ -0.66
NFKB1-202ENST00000394820 C19orf35Q6ZS72 473 aa10.9□□□□□ -0.66
NFKB1-202ENST00000394820 BEND2Q8NDZ0 799 aa10.9□□□□□ -0.66
NFKB1-202ENST00000394820 SARAFQ96BY9 339 aa10.9□□□□□ -0.66
NFKB1-202ENST00000394820 CSPG4Q6UVK1 2322 aa10.9□□□□□ -0.67
NFKB1-202ENST00000394820 TRAV17A0A0B4J275 112 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 J3KRW8 73 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 P01737 135 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 COTL1Q14019 142 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 TMEM177Q53S58 311 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 SLC35E4Q6ICL7 350 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 FAM222BQ8WU58 562 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 DCAF16Q9NXF7 216 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 F11RQ9Y624 299 aaKnown RBP10.89□□□□□ -0.67
NFKB1-202ENST00000394820 NRN1LQ496H8 165 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 PLA2G2CQ5R387 149 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 RPRMLQ8N4K4 120 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 CD177Q8N6Q3 437 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 SAA2-SAA4A0A096LPE2 208 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 TRAV8-1A0A0A6YYK1 113 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 STAG3L2P0CL84 134 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 STAG3L3P0CL85 134 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 SAA2P0DJI9 122 aaPredicted RBP10.89□□□□□ -0.67
NFKB1-202ENST00000394820 UTF1Q5T230 341 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 FAM168AQ92567 244 aa10.89□□□□□ -0.67
NFKB1-202ENST00000394820 CORTO00230 105 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 MGST3O14880 152 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 LEPROTL1O95214 131 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 IGKV1-16P04430 117 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 CA7P43166 264 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 MORN2Q502X0 79 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 FA2HQ7L5A8 372 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 ANKHD1Q8IWZ3 2542 aaKnown RBP10.88□□□□□ -0.67
NFKB1-202ENST00000394820 KLK10O43240 276 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 ZNF324O75467 553 aaPredicted RBP10.88□□□□□ -0.67
NFKB1-202ENST00000394820 C8orf88P0DMB2 117 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 OR4C46A6NHA9 309 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 K7EN84 100 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 ARL3P36405 182 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 PPOXP50336 477 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 LDLRAD2Q5SZI1 272 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 C11orf1Q9H5F2 150 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 HILPDAQ9Y5L2 63 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 IGF2RP11717 2491 aa10.88□□□□□ -0.67
NFKB1-202ENST00000394820 AHRRA9YTQ3 701 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 GFRA3O60609 400 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 GPX1P07203 203 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 BPIFB3P59826 476 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 CLEC7AQ9BXN2 247 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 RELNP78509 3460 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 SORL1Q92673 2214 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 IGLV2-14P01704 120 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 AMY1AP04745 511 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 CT45A6P0DMU7 189 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 CT45A5P0DMU8 189 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 CT45A7P0DMV0 189 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 KIR2DL2P43627 348 aaPredicted RBP10.87□□□□□ -0.67
NFKB1-202ENST00000394820 NMUP48645 174 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 MPV17L2Q567V2 206 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 CT45A1Q5HYN5 189 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 ZADH2Q8N4Q0 377 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 CT45A3Q8NHU0 189 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 CDC42EP3Q9UKI2 254 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 ANKRD11Q6UB99 2663 aaPredicted RBP10.87□□□□□ -0.67
NFKB1-202ENST00000394820 MPDU1O75352 247 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 HLA-DQA1P01909 254 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 Q6ZT83 130 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 LOXL4Q96JB6 756 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 HCFC1P51610 2035 aa10.87□□□□□ -0.67
NFKB1-202ENST00000394820 IGHV3OR16-13A0A075B7E8 117 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 IGHV3-74A0A0B4J1X5 117 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 ZNF134P52741 427 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 LGALS4P56470 323 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 MZT1Q08AG7 82 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 ASCL3Q9NQ33 180 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 CACNA1AO00555 2505 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 PPIAL4DF5H284 164 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 OR2J3O76001 311 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 SUB1P53999 127 aaKnown RBP eCLIP10.86□□□□□ -0.67
NFKB1-202ENST00000394820 FOXL1Q12952 345 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 LINC00305Q7Z4B0 112 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 RNASEH2CQ8TDP1 164 aaKnown RBP10.86□□□□□ -0.67
NFKB1-202ENST00000394820 C5orf30Q96GV9 206 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 ZNF71Q9NQZ8 489 aaPredicted RBP10.86□□□□□ -0.67
NFKB1-202ENST00000394820 NCOR2Q9Y618 2525 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 WNK1Q9H4A3 2382 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 INO80CQ6PI98 192 aaPredicted RBP10.86□□□□□ -0.67
NFKB1-202ENST00000394820 C18orf15Q96N68 181 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 ALKBH7Q9BT30 221 aaPredicted RBP10.86□□□□□ -0.67
NFKB1-202ENST00000394820 HIF1ANQ9NWT6 349 aa10.86□□□□□ -0.67
NFKB1-202ENST00000394820 A0A1W2PS18 150 aa10.85□□□□□ -0.67
NFKB1-202ENST00000394820 ISLRO14498 428 aa10.85□□□□□ -0.67
NFKB1-202ENST00000394820 GOLT1AQ6ZVE7 132 aa10.85□□□□□ -0.67
NFKB1-202ENST00000394820 BHLHA15Q7RTS1 189 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms