RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 IRF2P14316 349 aa14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 BRS3P32247 399 aa14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 PPOXP50336 477 aa14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 CD69Q07108 199 aa14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 OR1L8Q8NGR8 309 aa14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 SLC25A33Q9BSK2 321 aa14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 RPUSD1Q9UJJ7 312 aaKnown RBP14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 ICE1Q9Y2F5 2266 aa14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 RPL19P84098 196 aaKnown RBP14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 OR10J3Q5JRS4 329 aa14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 IBA57Q5T440 356 aaKnown RBP14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 MORN5Q5VZ52 161 aa14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 RND1Q92730 232 aa14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 RCHY1Q96PM5 261 aa14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 BET1LQ9NYM9 111 aa14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 SMIM27A0A1W2PRY6 76 aa14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 PSMB11A5LHX3 300 aa14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 IGHV1-46P01743 117 aa14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 MGST1P10620 155 aaKnown RBP14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 CASP6P55212 293 aa14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 ATP5IP56385 69 aaPredicted RBP14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 TNFAIP6P98066 277 aaPredicted RBP14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 ZNF788Q6ZQV5 615 aa14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 TBL2Q9Y4P3 447 aaKnown RBP14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 TRAV5A0A0B4J249 113 aa14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 AMY1AP04745 511 aa14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 ZNF25P17030 456 aaPredicted RBP14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 KRTDAPP60985 99 aa14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 COX19Q49B96 90 aa14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 MRPL54Q6P161 138 aaKnown RBP14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 OR5B3Q8NH48 314 aa14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 FAM167A-AS1Q96KT0 104 aa14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 SLC25A2Q9BXI2 301 aa14.89□□□□□ -0.03
PCDHA1-202ENST00000394633 BMPR1BO00238 502 aa14.88□□□□□ -0.03
PCDHA1-202ENST00000394633 RPLP1P05386 114 aaKnown RBP14.88□□□□□ -0.03
PCDHA1-202ENST00000394633 KCNS1Q96KK3 526 aa14.88□□□□□ -0.03
PCDHA1-202ENST00000394633 NRN1Q9NPD7 142 aa14.88□□□□□ -0.03
PCDHA1-202ENST00000394633 ZNF586Q9NXT0 402 aa14.88□□□□□ -0.03
PCDHA1-202ENST00000394633 A0A1W2PS18 150 aa14.88□□□□□ -0.03
PCDHA1-202ENST00000394633 MRPL32Q9BYC8 188 aaKnown RBP14.88□□□□□ -0.03
PCDHA1-202ENST00000394633 SERTAD4Q9NUC0 356 aa14.88□□□□□ -0.03
PCDHA1-202ENST00000394633 DCAF16Q9NXF7 216 aa14.88□□□□□ -0.03
PCDHA1-202ENST00000394633 CDC42EP3Q9UKI2 254 aa14.88□□□□□ -0.03
PCDHA1-202ENST00000394633 A6NNC1 897 aa14.87□□□□□ -0.03
PCDHA1-202ENST00000394633 SRIP30626 198 aa14.87□□□□□ -0.03
PCDHA1-202ENST00000394633 AMTP48728 403 aa14.87□□□□□ -0.03
PCDHA1-202ENST00000394633 NHLRC2Q8NBF2 726 aa14.87□□□□□ -0.03
PCDHA1-202ENST00000394633 OR2T6Q8NHC8 308 aa14.87□□□□□ -0.03
PCDHA1-202ENST00000394633 COL6A6A6NMZ7 2263 aa14.87□□□□□ -0.03
PCDHA1-202ENST00000394633 DIRC3C9JPN6 131 aa14.86□□□□□ -0.03
PCDHA1-202ENST00000394633 ZNF253O75346 499 aa14.86□□□□□ -0.03
PCDHA1-202ENST00000394633 CA1P00915 261 aaPredicted RBP14.86□□□□□ -0.03
PCDHA1-202ENST00000394633 HLA-DQA1P01909 254 aa14.86□□□□□ -0.03
PCDHA1-202ENST00000394633 SSBP2P81877 361 aaPredicted RBP14.86□□□□□ -0.03
PCDHA1-202ENST00000394633 TMEM30BQ3MIR4 351 aa14.86□□□□□ -0.03
PCDHA1-202ENST00000394633 C3orf36Q3SXR2 165 aa14.86□□□□□ -0.03
PCDHA1-202ENST00000394633 ASPHD1Q5U4P2 390 aa14.86□□□□□ -0.03
PCDHA1-202ENST00000394633 ZNF833PQ6ZTB9 187 aa14.86□□□□□ -0.03
PCDHA1-202ENST00000394633 FAM168AQ92567 244 aa14.86□□□□□ -0.03
PCDHA1-202ENST00000394633 LINC00479Q96M42 142 aa14.86□□□□□ -0.03
PCDHA1-202ENST00000394633 MRPL20Q9BYC9 149 aaKnown RBP14.86□□□□□ -0.03
PCDHA1-202ENST00000394633 PMCHP20382 165 aa14.86□□□□□ -0.03
PCDHA1-202ENST00000394633 UBE2L3P68036 154 aaKnown RBP14.86□□□□□ -0.03
PCDHA1-202ENST00000394633 NDUFA4L2Q9NRX3 87 aa14.86□□□□□ -0.03
PCDHA1-202ENST00000394633 IZUMO1RA6ND01 250 aa14.85□□□□□ -0.03
PCDHA1-202ENST00000394633 OR4B1Q8NGF8 309 aa14.85□□□□□ -0.03
PCDHA1-202ENST00000394633 FAM57AQ8TBR7 257 aa14.85□□□□□ -0.03
PCDHA1-202ENST00000394633 ZNF714Q96N38 554 aa14.85□□□□□ -0.03
PCDHA1-202ENST00000394633 RNF2Q99496 336 aa14.85□□□□□ -0.03
PCDHA1-202ENST00000394633 POLEQ07864 2286 aa14.85□□□□□ -0.03
PCDHA1-202ENST00000394633 E7EUB6 86 aa14.85□□□□□ -0.03
PCDHA1-202ENST00000394633 CHRNB4P30926 498 aa14.85□□□□□ -0.03
PCDHA1-202ENST00000394633 OSR1Q8TAX0 266 aaPredicted RBP14.85□□□□□ -0.03
PCDHA1-202ENST00000394633 CACNG8Q8WXS5 425 aa14.85□□□□□ -0.03
PCDHA1-202ENST00000394633 HARBI1Q96MB7 349 aa14.85□□□□□ -0.03
PCDHA1-202ENST00000394633 DNAJC4Q9NNZ3 241 aa14.85□□□□□ -0.03
PCDHA1-202ENST00000394633 CTRLP40313 264 aa14.84□□□□□ -0.03
PCDHA1-202ENST00000394633 C1orf185Q5T7R7 199 aa14.84□□□□□ -0.03
PCDHA1-202ENST00000394633 C22orf34Q6ZV56 151 aa14.84□□□□□ -0.03
PCDHA1-202ENST00000394633 SSBP3Q9BWW4 388 aaPredicted RBP14.84□□□□□ -0.03
PCDHA1-202ENST00000394633 COMMD5Q9GZQ3 224 aa14.84□□□□□ -0.03
PCDHA1-202ENST00000394633 ARFGEF3Q5TH69 2177 aa14.84□□□□□ -0.03
PCDHA1-202ENST00000394633 hADV38S2A0JD32 116 aa14.84□□□□□ -0.03
PCDHA1-202ENST00000394633 ZNF324O75467 553 aaPredicted RBP14.84□□□□□ -0.03
PCDHA1-202ENST00000394633 PYYP10082 97 aa14.84□□□□□ -0.03
PCDHA1-202ENST00000394633 TEX36Q5VZQ5 186 aa14.84□□□□□ -0.03
PCDHA1-202ENST00000394633 NIT1Q86X76 327 aa14.84□□□□□ -0.03
PCDHA1-202ENST00000394633 TMEM208Q9BTX3 173 aa14.84□□□□□ -0.03
PCDHA1-202ENST00000394633 SH3BGRL2Q9UJC5 107 aa14.84□□□□□ -0.03
PCDHA1-202ENST00000394633 LINC00312Q9Y6C7 94 aa14.84□□□□□ -0.03
PCDHA1-202ENST00000394633 PLCE1Q9P212 2302 aa14.84□□□□□ -0.03
PCDHA1-202ENST00000394633 H0YJW9 148 aa14.83□□□□□ -0.04
PCDHA1-202ENST00000394633 APCSP02743 223 aa14.83□□□□□ -0.04
PCDHA1-202ENST00000394633 USF1P22415 310 aaPredicted RBP14.83□□□□□ -0.04
PCDHA1-202ENST00000394633 SELENOVP59797 346 aa14.83□□□□□ -0.04
PCDHA1-202ENST00000394633 RPL8P62917 257 aaKnown RBP14.83□□□□□ -0.04
PCDHA1-202ENST00000394633 ERHP84090 104 aaKnown RBP14.83□□□□□ -0.04
PCDHA1-202ENST00000394633 MBD6Q96DN6 1003 aa14.83□□□□□ -0.04
PCDHA1-202ENST00000394633 DLEU1O43261 78 aa14.82□□□□□ -0.04
PCDHA1-202ENST00000394633 APOA2P02652 100 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms