RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 IGFBPL1Q8WX77 278 aa10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 SSBP3Q9BWW4 388 aaPredicted RBP10.9□□□□□ -0.66
GTF2F1-201ENST00000394456 PIEZO1Q92508 2521 aa10.9□□□□□ -0.67
GTF2F1-201ENST00000394456 IGLV2-8P01709 118 aa10.89□□□□□ -0.67
GTF2F1-201ENST00000394456 MGST1P10620 155 aaKnown RBP10.89□□□□□ -0.67
GTF2F1-201ENST00000394456 RAB4BP61018 213 aa10.89□□□□□ -0.67
GTF2F1-201ENST00000394456 USF2Q15853 346 aaPredicted RBP10.89□□□□□ -0.67
GTF2F1-201ENST00000394456 ADTRPQ96IZ2 230 aa10.89□□□□□ -0.67
GTF2F1-201ENST00000394456 CTSZQ9UBR2 303 aa10.89□□□□□ -0.67
GTF2F1-201ENST00000394456 hADV38S2A0JD32 116 aa10.89□□□□□ -0.67
GTF2F1-201ENST00000394456 TEX36Q5VZQ5 186 aa10.89□□□□□ -0.67
GTF2F1-201ENST00000394456 MRPL54Q6P161 138 aaKnown RBP10.89□□□□□ -0.67
GTF2F1-201ENST00000394456 ZNF833PQ6ZTB9 187 aa10.89□□□□□ -0.67
GTF2F1-201ENST00000394456 CMTM2Q8TAZ6 248 aa10.89□□□□□ -0.67
GTF2F1-201ENST00000394456 FAM167A-AS1Q96KT0 104 aa10.89□□□□□ -0.67
GTF2F1-201ENST00000394456 SLC25A2Q9BXI2 301 aa10.89□□□□□ -0.67
GTF2F1-201ENST00000394456 AREGP15514 252 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 CD69Q07108 199 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 NPIPB3Q92617 1050 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 CORO2AQ92828 525 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 RNASE6Q93091 150 aaKnown RBP10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 LINC00574Q9H8X3 128 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 DYNLRB1Q9NP97 96 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 NDUFA4L2Q9NRX3 87 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 LINC00312Q9Y6C7 94 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 HRNRQ86YZ3 2850 aaPredicted RBP10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 ZNF705FA8MVS1 300 aaPredicted RBP10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 CCL21O00585 134 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 ZNF705DP0CH99 300 aaPredicted RBP10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 ZNF705BP0CI00 300 aaPredicted RBP10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 UCNP55089 124 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 C2orf83Q53S99 150 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 PATE2Q6UY27 113 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 TBX15Q96SF7 602 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 SLC25A33Q9BSK2 321 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 COMMD5Q9GZQ3 224 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 TECRQ9NZ01 308 aaKnown RBP10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 NAGKQ9UJ70 344 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 ZNF257Q9Y2Q1 563 aa10.88□□□□□ -0.67
GTF2F1-201ENST00000394456 LYNX1G3V0Z9 82 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 H3BTX0 84 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 LYNX1P0DP58 116 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 CRISP2P16562 243 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 CNTFRP26992 372 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 CASP6P55212 293 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 RPL8P62917 257 aaKnown RBP10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 CDSNQ15517 529 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 RPEL1Q2QD12 228 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 ZNF714Q96N38 554 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 RCHY1Q96PM5 261 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 HSPB9Q9BQS6 159 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 TXNDC17Q9BRA2 123 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 FAM103A1Q9BTL3 118 aaKnown RBP10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 NDUFAF3Q9BU61 184 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 NCOR1P1Q9H4R4 102 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 ZNF430Q9H8G1 570 aaPredicted RBP10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 NGBQ9NPG2 151 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 SERTAD4Q9NUC0 356 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 ASH1LQ9NR48 2969 aaKnown RBP10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 PSMB11A5LHX3 300 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 NKX6-3A6NJ46 265 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 C9JCJ5 164 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 SLC25A17O43808 307 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 OR5G3P0C626 314 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 GNG5P63218 68 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 HCP5Q6MZN7 132 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 OR5AU1Q8NGC0 362 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 BET1LQ9NYM9 111 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 HIVEP3Q5T1R4 2406 aa10.87□□□□□ -0.67
GTF2F1-201ENST00000394456 PPIAL4EA0A075B759 164 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 PPIAL4DF5H284 164 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 TMEM178BH3BS89 294 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 MT-CO2P00403 227 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 MOSP00540 346 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 PPIAL4FP0DN26 164 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 CA7P43166 264 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 TGIF2LXQ8IUE1 241 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 OR10X1Q8NGY0 326 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 GSX1Q9H4S2 264 aaPredicted RBP10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 GNB4Q9HAV0 340 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 PPIAL4AQ9Y536 164 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 IGKV1D-37A0A075B6S9 117 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 UBE2L3P68036 154 aaKnown RBP10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 KLRB1Q12918 225 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 IQCJQ1A5X6 159 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 BAGE3Q86Y29 109 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 BAGE2Q86Y30 109 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 OR5AN1Q8NGI8 311 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 FLYWCH2Q96CP2 140 aaKnown RBP10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 IGF2BP2-AS1Q96M15 143 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 ZNF355PQ9NSJ1 428 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 TMEM106BQ9NUM4 274 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 IGLV2-23P01705 113 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 SELENOTP62341 195 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 MRGPRG-AS1Q2M3A8 158 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 TOMM20LQ6UXN7 152 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 BTF3L4Q96K17 158 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 SLC35E1Q96K37 410 aa10.86□□□□□ -0.67
GTF2F1-201ENST00000394456 SNHG12Q9BXW3 62 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms