RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 SCGB2B2Q4G0G5 96 aa13.4□□□□□ -0.26
PDLIM7-205ENST00000393551 STEAP1BQ6NZ63 245 aa13.4□□□□□ -0.26
PDLIM7-205ENST00000393551 FAM24BQ8N5W8 94 aa13.4□□□□□ -0.26
PDLIM7-205ENST00000393551 LHFPL5Q8TAF8 219 aa13.4□□□□□ -0.26
PDLIM7-205ENST00000393551 RTBDNQ9BSG5 229 aaPredicted RBP13.4□□□□□ -0.26
PDLIM7-205ENST00000393551 COPZ2Q9P299 210 aa13.4□□□□□ -0.26
PDLIM7-205ENST00000393551 DFFBO76075 338 aa13.39□□□□□ -0.27
PDLIM7-205ENST00000393551 ATF4P18848 351 aaPredicted RBP13.39□□□□□ -0.27
PDLIM7-205ENST00000393551 TAS2R19P59542 299 aa13.39□□□□□ -0.27
PDLIM7-205ENST00000393551 TRIM16LQ309B1 348 aa13.39□□□□□ -0.27
PDLIM7-205ENST00000393551 AARDQ4LEZ3 155 aa13.39□□□□□ -0.27
PDLIM7-205ENST00000393551 CEMP1Q6PRD7 247 aaPredicted RBP13.39□□□□□ -0.27
PDLIM7-205ENST00000393551 ZNF600Q6ZNG1 722 aa13.39□□□□□ -0.27
PDLIM7-205ENST00000393551 CLVS1Q8IUQ0 354 aaPredicted RBP13.39□□□□□ -0.27
PDLIM7-205ENST00000393551 ZFAND1Q8TCF1 268 aa13.39□□□□□ -0.27
PDLIM7-205ENST00000393551 GLYATL2Q8WU03 294 aa13.39□□□□□ -0.27
PDLIM7-205ENST00000393551 CSTL1Q9H114 145 aa13.39□□□□□ -0.27
PDLIM7-205ENST00000393551 MS4A6AQ9H2W1 248 aa13.39□□□□□ -0.27
PDLIM7-205ENST00000393551 RSL24D1Q9UHA3 163 aaKnown RBP13.39□□□□□ -0.27
PDLIM7-205ENST00000393551 GABARAPH6UMI1 98 aa13.38□□□□□ -0.27
PDLIM7-205ENST00000393551 CDS2O95674 445 aa13.38□□□□□ -0.27
PDLIM7-205ENST00000393551 OR5AC1P0C628 307 aa13.38□□□□□ -0.27
PDLIM7-205ENST00000393551 CCDC71LQ8N9Z2 235 aa13.38□□□□□ -0.27
PDLIM7-205ENST00000393551 GINS3Q9BRX5 216 aa13.38□□□□□ -0.27
PDLIM7-205ENST00000393551 TMEM222Q9H0R3 208 aa13.38□□□□□ -0.27
PDLIM7-205ENST00000393551 NUPR2A6NF83 97 aa13.37□□□□□ -0.27
PDLIM7-205ENST00000393551 CCDC160A6NGH7 325 aa13.37□□□□□ -0.27
PDLIM7-205ENST00000393551 HOXA1P49639 335 aaPredicted RBP13.37□□□□□ -0.27
PDLIM7-205ENST00000393551 C15orf40Q8WUR7 153 aa13.37□□□□□ -0.27
PDLIM7-205ENST00000393551 MPTX1A8MV57 137 aa13.36□□□□□ -0.27
PDLIM7-205ENST00000393551 CLN5O75503 358 aa13.36□□□□□ -0.27
PDLIM7-205ENST00000393551 ATG12O94817 140 aa13.36□□□□□ -0.27
PDLIM7-205ENST00000393551 IGKV1-17P01599 117 aa13.36□□□□□ -0.27
PDLIM7-205ENST00000393551 SUB1P53999 127 aaKnown RBP eCLIP13.36□□□□□ -0.27
PDLIM7-205ENST00000393551 CMC4P56277 68 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-205ENST00000393551 SSBP1Q04837 148 aaKnown RBP13.36□□□□□ -0.27
PDLIM7-205ENST00000393551 LEMD1Q68G75 181 aa13.36□□□□□ -0.27
PDLIM7-205ENST00000393551 SELENOHQ8IZQ5 122 aaKnown RBP13.36□□□□□ -0.27
PDLIM7-205ENST00000393551 OR4X1Q8NH49 305 aa13.36□□□□□ -0.27
PDLIM7-205ENST00000393551 SMIM4Q8WVI0 70 aa13.36□□□□□ -0.27
PDLIM7-205ENST00000393551 RRNAD1Q96FB5 475 aaKnown RBP13.36□□□□□ -0.27
PDLIM7-205ENST00000393551 PDCD10Q9BUL8 212 aa13.36□□□□□ -0.27
PDLIM7-205ENST00000393551 C6orf62Q9GZU0 229 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-205ENST00000393551 TEX13DA0A0J9YY54 714 aaPredicted RBP13.35□□□□□ -0.27
PDLIM7-205ENST00000393551 CORTO00230 105 aa13.35□□□□□ -0.27
PDLIM7-205ENST00000393551 RGS5O15539 181 aa13.35□□□□□ -0.27
PDLIM7-205ENST00000393551 B3GALNT1O75752 331 aa13.35□□□□□ -0.27
PDLIM7-205ENST00000393551 LY6G6CO95867 125 aa13.35□□□□□ -0.27
PDLIM7-205ENST00000393551 CD5P06127 495 aa13.35□□□□□ -0.27
PDLIM7-205ENST00000393551 OPRK1P41145 380 aa13.35□□□□□ -0.27
PDLIM7-205ENST00000393551 DEFB131AP59861 70 aa13.35□□□□□ -0.27
PDLIM7-205ENST00000393551 SPCS3P61009 180 aa13.35□□□□□ -0.27
PDLIM7-205ENST00000393551 OR4C16Q8NGL9 310 aa13.35□□□□□ -0.27
PDLIM7-205ENST00000393551 TMEM170AQ8WVE7 144 aa13.35□□□□□ -0.27
PDLIM7-205ENST00000393551 GPR146Q96CH1 333 aa13.35□□□□□ -0.27
PDLIM7-205ENST00000393551 RARRES2Q99969 163 aa13.35□□□□□ -0.27
PDLIM7-205ENST00000393551 NAA60Q9H7X0 242 aa13.35□□□□□ -0.27
PDLIM7-205ENST00000393551 GPR132Q9UNW8 380 aa13.35□□□□□ -0.27
PDLIM7-205ENST00000393551 DNAH6Q9C0G6 4158 aa13.34□□□□□ -0.27
PDLIM7-205ENST00000393551 CRYBB3P26998 211 aa13.34□□□□□ -0.27
PDLIM7-205ENST00000393551 PAFAH1B2P68402 229 aa13.34□□□□□ -0.27
PDLIM7-205ENST00000393551 MRPS10P82664 201 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-205ENST00000393551 MEF2DQ14814 521 aa13.34□□□□□ -0.27
PDLIM7-205ENST00000393551 TIGITQ495A1 244 aa13.34□□□□□ -0.27
PDLIM7-205ENST00000393551 OR52E5Q8NH55 327 aa13.34□□□□□ -0.27
PDLIM7-205ENST00000393551 GATAD1Q8WUU5 269 aa13.34□□□□□ -0.27
PDLIM7-205ENST00000393551 RBPMSQ93062 196 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-205ENST00000393551 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.34□□□□□ -0.27
PDLIM7-205ENST00000393551 TRAV2A0A0B4J234 112 aa13.33□□□□□ -0.28
PDLIM7-205ENST00000393551 CRYM-AS1A6NIL9 109 aa13.33□□□□□ -0.28
PDLIM7-205ENST00000393551 GIG44P09565 113 aaPredicted RBP13.33□□□□□ -0.28
PDLIM7-205ENST00000393551 NPPCP23582 126 aa13.33□□□□□ -0.28
PDLIM7-205ENST00000393551 RPL11P62913 178 aaKnown RBP13.33□□□□□ -0.28
PDLIM7-205ENST00000393551 SURF2Q15527 256 aaPredicted RBP13.33□□□□□ -0.28
PDLIM7-205ENST00000393551 FAM219AQ8IW50 185 aa13.33□□□□□ -0.28
PDLIM7-205ENST00000393551 OR11H2Q8NH07 326 aa13.33□□□□□ -0.28
PDLIM7-205ENST00000393551 RNASE11Q8TAA1 199 aaKnown RBP13.33□□□□□ -0.28
PDLIM7-205ENST00000393551 ENY2Q9NPA8 101 aa13.33□□□□□ -0.28
PDLIM7-205ENST00000393551 CACNG5Q9UF02 275 aa13.33□□□□□ -0.28
PDLIM7-205ENST00000393551 C14orf166Q9Y224 244 aaKnown RBP13.33□□□□□ -0.28
PDLIM7-205ENST00000393551 H3BMQ9 156 aa13.32□□□□□ -0.28
PDLIM7-205ENST00000393551 DNASE2O00115 360 aaPredicted RBP13.32□□□□□ -0.28
PDLIM7-205ENST00000393551 CTDSPLO15194 276 aa13.32□□□□□ -0.28
PDLIM7-205ENST00000393551 RBMS2Q15434 407 aaKnown RBP13.32□□□□□ -0.28
PDLIM7-205ENST00000393551 PRSS54Q6PEW0 395 aa13.32□□□□□ -0.28
PDLIM7-205ENST00000393551 TMEM217Q8N7C4 229 aa13.32□□□□□ -0.28
PDLIM7-205ENST00000393551 OR51S1Q8NGJ8 323 aa13.32□□□□□ -0.28
PDLIM7-205ENST00000393551 DYNC2LI1Q8TCX1 351 aa13.32□□□□□ -0.28
PDLIM7-205ENST00000393551 PHLDA1Q8WV24 401 aaPredicted RBP13.32□□□□□ -0.28
PDLIM7-205ENST00000393551 TMEM230Q96A57 120 aa13.32□□□□□ -0.28
PDLIM7-205ENST00000393551 PRR13Q9NZ81 148 aa13.32□□□□□ -0.28
PDLIM7-205ENST00000393551 TMEM56-RWDD3S4R434 201 aa13.32□□□□□ -0.28
PDLIM7-205ENST00000393551 U3KQE9 123 aa13.32□□□□□ -0.28
PDLIM7-205ENST00000393551 DISC1C4P0D8 188 aa13.31□□□□□ -0.28
PDLIM7-205ENST00000393551 K7EQG2 157 aa13.31□□□□□ -0.28
PDLIM7-205ENST00000393551 CA1P00915 261 aaPredicted RBP13.31□□□□□ -0.28
PDLIM7-205ENST00000393551 IGLC1P0CG04 106 aa13.31□□□□□ -0.28
PDLIM7-205ENST00000393551 AKAIN1P0CW23 69 aa13.31□□□□□ -0.28
PDLIM7-205ENST00000393551 HTR2BP41595 481 aa13.31□□□□□ -0.28
PDLIM7-205ENST00000393551 P2RY1P47900 373 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms