RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 INSIG2Q9Y5U4 225 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 NCKAP5O14513 1909 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 MBD3L4A6NDZ8 208 aaPredicted RBP8.69□□□□□ -1.02
CALD1-203ENST00000393118 MBD3L3A6NE82 208 aaPredicted RBP8.69□□□□□ -1.02
CALD1-203ENST00000393118 MBD3L5A6NJ08 208 aaPredicted RBP8.69□□□□□ -1.02
CALD1-203ENST00000393118 RBP4P02753 201 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 CSN3P07498 182 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 LMO1P25800 156 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 LGALS4P56470 323 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 MBD3L2Q8NHZ7 208 aaPredicted RBP8.69□□□□□ -1.02
CALD1-203ENST00000393118 LYPD6BQ8NI32 183 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 VSTM2AQ8TAG5 236 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 LINC01560Q8TB33 94 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 SCO2A0A1W2PP80 73 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 SPRNQ5BIV9 151 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 SSX8Q7RTT4 187 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 OR2T6Q8NHC8 308 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 TIMD4Q96H15 378 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 MRPL20Q9BYC9 149 aaKnown RBP8.69□□□□□ -1.02
CALD1-203ENST00000393118 FNDC4Q9H6D8 234 aaPredicted RBP8.69□□□□□ -1.02
CALD1-203ENST00000393118 K7EM74 188 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 CRYBB3P26998 211 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 LCN2P80188 198 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 FXYD3Q14802 87 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 C12orf54Q6X4T0 127 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 ZNF841Q6ZN19 808 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 NHLRC2Q8NBF2 726 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 SGK494Q96LW2 274 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 NABP2Q9BQ15 211 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 GTSF1LQ9H1H1 148 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 TMEM167BQ9NRX6 74 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 ZNF355PQ9NSJ1 428 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 WDR83OSQ9Y284 106 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 CREBBPQ92793 2442 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 TRAV1-1A0A0B4J248 108 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 A0A1B0GW64 132 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 C15orf62A8K5M9 175 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 C17orf100A8MU93 164 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 LYNX1G3V0Z9 82 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 ISLRO14498 428 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 CGAP01215 116 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 LINC00869P0C866 280 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 CT45A6P0DMU7 189 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 CT45A5P0DMU8 189 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 CT45A7P0DMV0 189 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 LYNX1P0DP58 116 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 RBX1P62877 108 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 DAZAP2Q15038 168 aaPredicted RBP8.68□□□□□ -1.02
CALD1-203ENST00000393118 PMCHL1Q16048 86 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 ACTL10Q5JWF8 245 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 SLC25A34Q6PIV7 304 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 DERL1Q9BUN8 251 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 KIR2DL5BA0A0G2JN68 375 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 KIR2DL5BA0A0G2JPC4 375 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 GCHFRP30047 84 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 TREML4Q6UXN2 200 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 Q6ZWC4 215 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 KIR2DL5AQ8N109 375 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 SFRP2Q96HF1 295 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 CCL21O00585 134 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 PPOXP50336 477 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 BPIFA4PQ86YQ2 179 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 TMEM191AQ9H0A3 160 aa8.68□□□□□ -1.02
CALD1-203ENST00000393118 SLC25A5P05141 298 aaKnown RBP8.67□□□□□ -1.02
CALD1-203ENST00000393118 PFN1P07737 140 aaKnown RBP8.67□□□□□ -1.02
CALD1-203ENST00000393118 MPV17L2Q567V2 206 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 OR10W1Q8NGF6 305 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 GAGE12BA1L429 117 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 C15orf61A6NNL5 157 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 H3BTX0 84 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 ZNF134P52741 427 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 NHLH1Q02575 133 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 PQLC2Q6ZP29 291 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 Q6ZS92 163 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 MIR17HGQ75NE6 70 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 OR8B3Q8NGG8 313 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 NPIPB3Q92617 1050 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 NCOR2Q9Y618 2525 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 TRAV30A0A087WSZ9 112 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 A0A1W2PN81 502 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 IGLV2-14P01704 120 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 APCSP02743 223 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 SAA1P0DJI8 122 aaPredicted RBP8.67□□□□□ -1.02
CALD1-203ENST00000393118 C10orf55Q5SWW7 151 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 PIP4P1Q86T03 277 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 IFI27L2Q9H2X8 130 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 DKK4Q9UBT3 224 aa8.67□□□□□ -1.02
CALD1-203ENST00000393118 PEF1Q9UBV8 284 aaKnown RBP8.67□□□□□ -1.02
CALD1-203ENST00000393118 NCBP2LA6PVI3 153 aaKnown RBP8.66□□□□□ -1.02
CALD1-203ENST00000393118 HYPMO75409 117 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 TSPOP30536 169 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 LYZP61626 148 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 SPATA31B1PQ5VZV4 182 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 OR8B2Q96RD0 313 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 SCNM1Q9BWG6 230 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 FAM215AQ9Y5M1 114 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 OR2T8A6NH00 312 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 IGKV1-16P04430 117 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 C10orf113Q5VZT2 155 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 DOLPP1Q86YN1 238 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms