RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 CST9LP1Q5W188 147 aa16.03■□□□□ 0.16
PTPN11-202ENST00000392597 SRSF12Q8WXF0 261 aaKnown RBP16.03■□□□□ 0.16
PTPN11-202ENST00000392597 CRYBG3Q68DQ2 2970 aa16.03■□□□□ 0.16
PTPN11-202ENST00000392597 TCRBV4S1A1TA0A5B7 111 aa16.02■□□□□ 0.16
PTPN11-202ENST00000392597 PDLIM4P50479 330 aa16.02■□□□□ 0.16
PTPN11-202ENST00000392597 TAS2R45P59539 299 aa16.02■□□□□ 0.16
PTPN11-202ENST00000392597 LCN2P80188 198 aa16.02■□□□□ 0.16
PTPN11-202ENST00000392597 FAM24BQ8N5W8 94 aa16.02■□□□□ 0.16
PTPN11-202ENST00000392597 NPIPB3Q92617 1050 aa16.02■□□□□ 0.16
PTPN11-202ENST00000392597 MRPL32Q9BYC8 188 aaKnown RBP16.02■□□□□ 0.16
PTPN11-202ENST00000392597 TECRQ9NZ01 308 aaKnown RBP16.02■□□□□ 0.16
PTPN11-202ENST00000392597 F11RQ9Y624 299 aaKnown RBP16.02■□□□□ 0.16
PTPN11-202ENST00000392597 IGHV4-39P01824 125 aa16.01■□□□□ 0.15
PTPN11-202ENST00000392597 RAB5AP20339 215 aa16.01■□□□□ 0.15
PTPN11-202ENST00000392597 UBE2G2P60604 165 aa16.01■□□□□ 0.15
PTPN11-202ENST00000392597 ZNF674Q2M3X9 581 aa16.01■□□□□ 0.15
PTPN11-202ENST00000392597 PQLC2Q6ZP29 291 aa16.01■□□□□ 0.15
PTPN11-202ENST00000392597 MALSU1Q96EH3 234 aa16.01■□□□□ 0.15
PTPN11-202ENST00000392597 CTDSP1Q9GZU7 261 aa16.01■□□□□ 0.15
PTPN11-202ENST00000392597 TMEM167BQ9NRX6 74 aa16.01■□□□□ 0.15
PTPN11-202ENST00000392597 PSMB11A5LHX3 300 aa16.01■□□□□ 0.15
PTPN11-202ENST00000392597 COL8A1P27658 744 aa16.01■□□□□ 0.15
PTPN11-202ENST00000392597 MFAP2P55001 183 aa16.01■□□□□ 0.15
PTPN11-202ENST00000392597 LGALS4P56470 323 aa16.01■□□□□ 0.15
PTPN11-202ENST00000392597 MIR17HGQ75NE6 70 aa16.01■□□□□ 0.15
PTPN11-202ENST00000392597 OR2T10Q8NGZ9 312 aa16.01■□□□□ 0.15
PTPN11-202ENST00000392597 C22orf15Q8WYQ4 148 aa16.01■□□□□ 0.15
PTPN11-202ENST00000392597 EAF1Q96JC9 268 aaPredicted RBP16.01■□□□□ 0.15
PTPN11-202ENST00000392597 TBL2Q9Y4P3 447 aaKnown RBP16.01■□□□□ 0.15
PTPN11-202ENST00000392597 IGKV1D-37A0A075B6S9 117 aa16■□□□□ 0.15
PTPN11-202ENST00000392597 FCN1O00602 326 aa16■□□□□ 0.15
PTPN11-202ENST00000392597 FOXH1O75593 365 aa16■□□□□ 0.15
PTPN11-202ENST00000392597 GATA2P23769 480 aaPredicted RBP16■□□□□ 0.15
PTPN11-202ENST00000392597 ATP5G3P48201 142 aa16■□□□□ 0.15
PTPN11-202ENST00000392597 TMEM116Q8NCL8 245 aa16■□□□□ 0.15
PTPN11-202ENST00000392597 POLR3KQ9Y2Y1 108 aaPredicted RBP16■□□□□ 0.15
PTPN11-202ENST00000392597 AKAP6Q13023 2319 aa16■□□□□ 0.15
PTPN11-202ENST00000392597 TOX4O94842 621 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 NPPCP23582 126 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 RND2P52198 227 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 EBI3Q14213 229 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 OR1L4Q8NGR5 311 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 MISP3Q96FF7 219 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 PFDN5Q99471 154 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 DNAJC4Q9NNZ3 241 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 DOK5Q9P104 306 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 WNK2Q9Y3S1 2297 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 CLDN34H7C241 214 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 UBE2E1P51965 193 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 SSX2Q16385 188 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 TRGV9Q99603 122 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 CCL19Q99731 98 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 SLC25A33Q9BSK2 321 aa15.99■□□□□ 0.15
PTPN11-202ENST00000392597 C1orf196B1AJZ1 125 aa15.98■□□□□ 0.15
PTPN11-202ENST00000392597 CNIH1O95406 144 aa15.98■□□□□ 0.15
PTPN11-202ENST00000392597 RAB5BP61020 215 aa15.98■□□□□ 0.15
PTPN11-202ENST00000392597 RPL23P62829 140 aaKnown RBP15.98■□□□□ 0.15
PTPN11-202ENST00000392597 ADIRFQ15847 76 aa15.98■□□□□ 0.15
PTPN11-202ENST00000392597 C5orf64Q2M2E5 130 aa15.98■□□□□ 0.15
PTPN11-202ENST00000392597 TMEM37Q8WXS4 190 aa15.98■□□□□ 0.15
PTPN11-202ENST00000392597 MRPL36Q9P0J6 103 aaKnown RBP15.98■□□□□ 0.15
PTPN11-202ENST00000392597 YTHDF2Q9Y5A9 579 aaKnown RBP15.98■□□□□ 0.15
PTPN11-202ENST00000392597 A0A1W2PRD5 423 aa15.97■□□□□ 0.15
PTPN11-202ENST00000392597 A0A1W2PRF3 423 aa15.97■□□□□ 0.15
PTPN11-202ENST00000392597 A0A1W2PRM7 423 aa15.97■□□□□ 0.15
PTPN11-202ENST00000392597 C8orf88P0DMB2 117 aa15.97■□□□□ 0.15
PTPN11-202ENST00000392597 BPIFB3P59826 476 aa15.97■□□□□ 0.15
PTPN11-202ENST00000392597 ELOBQ15370 118 aa15.97■□□□□ 0.15
PTPN11-202ENST00000392597 Q8N6K4 173 aa15.97■□□□□ 0.15
PTPN11-202ENST00000392597 OR51G1Q8NGK1 321 aa15.97■□□□□ 0.15
PTPN11-202ENST00000392597 HES1Q14469 280 aa15.97■□□□□ 0.15
PTPN11-202ENST00000392597 OR1L6Q8NGR2 347 aa15.97■□□□□ 0.15
PTPN11-202ENST00000392597 TBX15Q96SF7 602 aa15.97■□□□□ 0.15
PTPN11-202ENST00000392597 COX7A2P2O60397 106 aa15.96■□□□□ 0.15
PTPN11-202ENST00000392597 NDUFB4O95168 129 aa15.96■□□□□ 0.15
PTPN11-202ENST00000392597 DYNAPQ8N1N2 210 aa15.96■□□□□ 0.15
PTPN11-202ENST00000392597 C11orf52Q96A22 123 aa15.96■□□□□ 0.15
PTPN11-202ENST00000392597 UHRF2Q96PU4 802 aa15.96■□□□□ 0.15
PTPN11-202ENST00000392597 LPAR2Q9HBW0 351 aa15.96■□□□□ 0.15
PTPN11-202ENST00000392597 TNFRSF19Q9NS68 423 aa15.96■□□□□ 0.15
PTPN11-202ENST00000392597 NDUFS8O00217 210 aa15.95■□□□□ 0.14
PTPN11-202ENST00000392597 CTRB1P17538 263 aa15.95■□□□□ 0.14
PTPN11-202ENST00000392597 ZNF90Q03938 601 aa15.95■□□□□ 0.14
PTPN11-202ENST00000392597 CTRB2Q6GPI1 263 aa15.95■□□□□ 0.14
PTPN11-202ENST00000392597 C1QL4Q86Z23 238 aa15.95■□□□□ 0.14
PTPN11-202ENST00000392597 Q8WTZ3 238 aa15.95■□□□□ 0.14
PTPN11-202ENST00000392597 ZNF503Q96F45 646 aa15.95■□□□□ 0.14
PTPN11-202ENST00000392597 PIMREGQ9BSJ6 248 aa15.95■□□□□ 0.14
PTPN11-202ENST00000392597 ELOA3CA0A087WX78 387 aaPredicted RBP15.95■□□□□ 0.14
PTPN11-202ENST00000392597 OR7C2O60412 319 aa15.95■□□□□ 0.14
PTPN11-202ENST00000392597 IGHV3-48P01763 117 aa15.95■□□□□ 0.14
PTPN11-202ENST00000392597 APELAP0DMC3 54 aa15.95■□□□□ 0.14
PTPN11-202ENST00000392597 FXYD3Q14802 87 aa15.95■□□□□ 0.14
PTPN11-202ENST00000392597 C10orf113Q5VZT2 155 aa15.95■□□□□ 0.14
PTPN11-202ENST00000392597 DMRT1Q9Y5R6 373 aa15.95■□□□□ 0.14
PTPN11-202ENST00000392597 CELSR2Q9HCU4 2923 aa15.94■□□□□ 0.14
PTPN11-202ENST00000392597 CENPEQ02224 2701 aa15.94■□□□□ 0.14
PTPN11-202ENST00000392597 KIAA0141Q14154 515 aaPredicted RBP15.94■□□□□ 0.14
PTPN11-202ENST00000392597 OR4X1Q8NH49 305 aa15.94■□□□□ 0.14
PTPN11-202ENST00000392597 FAM168AQ92567 244 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms